mRNA_Ecto-sp13_S_contig1069.633.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: D7FKC9_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC9_ECTSI) HSP 1 Score: 303 bits (775), Expect = 2.690e-92 Identity = 157/170 (92.35%), Postives = 161/170 (94.71%), Query Frame = 3
Query: 453 GVLRGVQGVGSYQGATRRELNEVCVRQRLLPKPLSVVPALEHVQRRSTGGRIAIVRVLRLQVSRGVLPRVQQLGCLGGEEGLQIAILRLHRCVLRDIVPIVWHVGQREGSSRRRKQLPLLRQLRLGVPRGILPLLPPVGLLRRHQGGVYPGLQEPAVPRPPGR*QE-GRG 959
GVLRGVQ VGSY+G TRRELNEVCVRQRLLPKPLSVVPALEHVQRRS GG IAIVRVLRLQVSRGVLPRVQQLGCLGGEEGLQIAILRLHRCVLRDIVPIVWHVGQR+GSSRRRKQLPLLRQL LGVPRG+LPLLPPVGLLRR QG V+PGLQEPAVPRPPGR QE GRG
Sbjct: 90 GVLRGVQRVGSYKGPTRRELNEVCVRQRLLPKPLSVVPALEHVQRRSPGGGIAIVRVLRLQVSRGVLPRVQQLGCLGGEEGLQIAILRLHRCVLRDIVPIVWHVGQRQGSSRRRKQLPLLRQLWLGVPRGVLPLLPPVGLLRRRQGRVHPGLQEPAVPRPPGRWQEDGRG 259
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A7S0DB04_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DB04_9EUKA) HSP 1 Score: 75.9 bits (185), Expect = 3.800e-11 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 1 MVTNHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFDLDLRS 228
MVT HY ++G+++ A E ++AY LAL WHPD+ N +KKEAED FK I+EAY +LSD RRKE+DL L S
Sbjct: 1 MVT-HYQILGVKETANAREIRKAYRVLALRWHPDKVQN---DQKKEAEDKFKLISEAYQLLSDPKRRKEYDLSLCS 72
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: J9JC41_9SPIT (DnaJ multi-domain protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9JC41_9SPIT) HSP 1 Score: 77.0 bits (188), Expect = 9.360e-11 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFDL 216
++YA+MG+ A E K+AY +LAL WHPDR S+++K +A+ +FK INEAY +LSD +RK++DL
Sbjct: 360 DYYAIMGVDKKATDDEIKKAYKKLALKWHPDRNQGGSDEQKAKADKMFKDINEAYTVLSDPSKRKQYDL 428
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: UPI000BA8234E (dnaJ homolog subfamily C member 7-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8234E) HSP 1 Score: 71.2 bits (173), Expect = 1.380e-10 Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
N Y ++G+ A E K+AY + AL+ HPDR NASEQ +KE E FK++ EAY++LSD +R+ +D
Sbjct: 43 NFYKILGVDKTASEEEIKKAYRKRALLHHPDRHTNASEQERKEEEKKFKEVGEAYSVLSDSKKRERYD 110
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A7V6E7H5_9DELT (J domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V6E7H5_9DELT) HSP 1 Score: 70.9 bits (172), Expect = 2.570e-10 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 MVTNHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
M ++Y ++G+ A E K+AYH+LA+ WHPDR + KEAE+ FK+INEAYA+LSD +R+++D
Sbjct: 1 MAKDYYQILGVPRNATQEEIKKAYHKLAMQWHPDRNRGS-----KEAEEKFKEINEAYAVLSDPEKRRQYD 66
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A7S1II72_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1II72_9EUGL) HSP 1 Score: 73.9 bits (180), Expect = 3.360e-10 Identity = 30/67 (44.78%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 13 HYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
+Y+++G++ A E K+AY +LA+ WHPD+ +E+ + +AE++FKKI+EAY +LSD+ +RKE+D
Sbjct: 153 YYSILGVEKDADAKEIKKAYRKLAMQWHPDKNRQGTEEEQAKAEEMFKKISEAYQVLSDEEKRKEYD 219
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A1F9D3R5_9DELT (Integrase n=1 Tax=Deltaproteobacteria bacterium RBG_16_47_11 TaxID=1797838 RepID=A0A1F9D3R5_9DELT) HSP 1 Score: 73.2 bits (178), Expect = 3.490e-10 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
++Y ++G+ AR E K+AY +LA+ +HPDR N KKEAE+ FK+INEAYA+LSDK +RK++D
Sbjct: 5 DYYEILGVSKNARDDEIKKAYRKLAMKYHPDRNPN-----KKEAEERFKEINEAYAVLSDKEKRKQYD 67
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A1F9CDP9_9DELT (Integrase n=1 Tax=Deltaproteobacteria bacterium RBG_16_49_23 TaxID=1797840 RepID=A0A1F9CDP9_9DELT) HSP 1 Score: 73.2 bits (178), Expect = 3.540e-10 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
N+Y ++G+ A E KRAY +LA+ +HPDR N KKEAE FK+INEAYA+LSDK +RK++D
Sbjct: 5 NYYEILGVSKSASDEEIKRAYRKLAMKYHPDRNPN-----KKEAEGRFKEINEAYAVLSDKEKRKQYD 67
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: UPI0013D8CF10 (molecular chaperone DnaJ n=1 Tax=Fusobacterium sp. IOR10 TaxID=2665157 RepID=UPI0013D8CF10) HSP 1 Score: 73.9 bits (180), Expect = 3.980e-10 Identity = 34/68 (50.00%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
++Y ++GI+ A SE K+AY +LA+ +HPD+ NASE+ KKEAE+ FK+INEAY +LSD ++ ++D
Sbjct: 5 DYYDLLGIEKTASDSEIKKAYRKLAMKYHPDKFSNASEKEKKEAENKFKEINEAYQVLSDSDKKSKYD 72
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Match: A0A397FNM9_9MOLU (Chaperone protein DnaJ n=1 Tax=endosymbiont GvMRE of Glomus versiforme TaxID=2039283 RepID=A0A397FNM9_9MOLU) HSP 1 Score: 73.9 bits (180), Expect = 4.040e-10 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 10 NHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVFKKINEAYAILSDKVRRKEFD 213
++Y V+G+ A +E K+AYH+LAL WHPDR V E+ KK AE+ FK+I EAY++LSDK +R+ +D
Sbjct: 5 DYYEVLGVDKNASEAEIKKAYHKLALKWHPDRHVG-KEKEKKVAEEKFKEIGEAYSVLSDKEKRQNYD 71 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1069.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1069.633.1 >prot_Ecto-sp13_S_contig1069.633.1 ID=prot_Ecto-sp13_S_contig1069.633.1|Name=mRNA_Ecto-sp13_S_contig1069.633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=873bp MVTNHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKKEAEDVback to top mRNA from alignment at Ecto-sp13_S_contig1069:4873..10995- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1069.633.1 ID=mRNA_Ecto-sp13_S_contig1069.633.1|Name=mRNA_Ecto-sp13_S_contig1069.633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6123bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1069:4873..10995- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1069:4873..10995- >mRNA_Ecto-sp13_S_contig1069.633.1 ID=mRNA_Ecto-sp13_S_contig1069.633.1|Name=mRNA_Ecto-sp13_S_contig1069.633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2619bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1069:4873..10995- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |