mRNA_Ecto-sp13_S_contig10683.628.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: D8LFC6_ECTSI (Homologue of the meiosis-specific protein HOP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC6_ECTSI) HSP 1 Score: 499 bits (1286), Expect = 3.280e-173 Identity = 254/264 (96.21%), Postives = 259/264 (98.11%), Query Frame = 1
Query: 7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQPRREDPDATTADGGNNSSDESDEDSDGEGSSDGR 798
+QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQ D+AVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIH+KLKIKIGDLQTPHHTLSLRFRGYDTQEQ REDPDATTADGG+NSSD+SDEDSDGE S DGR
Sbjct: 45 AQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQEDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHNKLKIKIGDLQTPHHTLSLRFRGYDTQEQSHREDPDATTADGGSNSSDDSDEDSDGERSCDGR 308
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A6H5L5T0_9PHAE (HORMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T0_9PHAE) HSP 1 Score: 324 bits (831), Expect = 4.730e-105 Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 1
Query: 274 MEFIIMSPNHENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQPRREDPDATTADGGNNSSDESDEDSDGE 780
MEFIIMSPNHENPREAYSFDLSYPEDQGD+AVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKN KSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQ REDPDATTADGGNNSSD+SDE SDGE
Sbjct: 1 MEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNCKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQSHREDPDATTADGGNNSSDDSDEYSDGE 169
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: D8M718_BLAHO (HORMA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M718_BLAHO) HSP 1 Score: 148 bits (373), Expect = 2.220e-39 Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1
Query: 13 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR-----EAYSFDLSYPEDQGDDAVIFSGTK--VTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
VT+ QSL +VKN+IR SIS +C+LR +F CF ++ YAG+ I L + E + + EA+ LT WLE GVF A+E RYLR + F I N EN E YS+ +YP+ Q + + V + KN+ + L+R+LI+ +TL LPRER + ++L+Y+DD TPP +QP YF D ++ + + G S I D I+ G L+TP H + ++ R
Sbjct: 10 VTQQQSLAVVKNMIRTSISEICYLRNLFDEDCFCKKNYAGIMINALHPMDTKEGS-EPHIHNSEAWQLTRWLEEGVFDALEKRYLRGLVFAIYD-NPENKSQSRLIETYSYAFTYPDTQHIQLEVKQNNERSVVSTDGVKNQAVILLRTLITLCSTLSPLPRERWITLQLYYYDDITPPDYQPAYFE--DTADSSIRPGDSSF-ISDPFVIEAGRLRTPFHAMCMKVR 232
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A196S9B0_BLAHN (HOP1, HORMA domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9B0_BLAHN) HSP 1 Score: 145 bits (367), Expect = 1.890e-38 Identity = 84/237 (35.44%), Postives = 129/237 (54.43%), Query Frame = 1
Query: 13 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR----EAYSFDLSYPEDQGDDAVIFSGT--KVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRT----------PPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
V++ QSL +VKN++R SIS +C+LR +F CF ++ YAG+ I L T + D+ + +QEA+ LT WLE GVF A+E RYLR + F I + + E YS+ +YP+ + V T KN+ + L+R+LI+ +TL LP ER + ++L+Y+DD T PP +QP YF D + + G S + D I+ G L+TP+H + ++ R
Sbjct: 10 VSQQQSLAVVKNMVRTSISEICYLRNLFNEDCFSQKNYAGIMINALHPVTNGKEGDQPQIHNQEAWQLTRWLEEGVFDALEKRYLRGLVFAIYDHPEDKQKSRLLETYSYAFTYPDTTNITLEVTQNNDKSVVTTDGVKNQAVILLRTLITLCSTLNPLPNERWVTMQLYYYDDVTVGSHSHHHIKPPDYQPKYFE--DTATASITPGSSTF-VADPFVIETGKLRTPYHAMCMKVR 243
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: W4FWS5_9STRA (HORMA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWS5_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.200e-38 Identity = 88/235 (37.45%), Postives = 141/235 (60.00%), Query Frame = 1
Query: 1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMS----PNHENPREAYSFDLSYPEDQGDDAVIFSGTKV--TTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT 687
G S++TETQSL ++KNLIRVSIS +C+LR +FP + F+ER YA M+I L A ++ D+++ Q+AY +T WLE+G F A+E +YL ++EF I + +N E Y++ + + + F+GT+ + + K + + +IR+L+S NTL LP+ R + +KL Y +D P GWQP YF+E S+L G+S LK+ +G + TP H +S++ ++
Sbjct: 30 GNSKITETQSLNVIKNLIRVSISEICYLRNLFPDEVFKERVYADMQIKCL--APQENSRDQSM---QDAYSITEWLEAGAFDAMEKKYLLQLEFCIYALGKNKTPQNLLECYTYKIKETSNGSTFSTSFTGTQNIDSHPEKVKTQAVQMIRNLVSITNTLEPLPKSRYITMKLSY-NDLCPSGWQPKYFKEL-TSDLGESFGEST------LKLDVGRMATPFHAISMKLEAAES 251
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: W7TNY4_9STRA (Horma domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNY4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.750e-34 Identity = 87/246 (35.37%), Postives = 130/246 (52.85%), Query Frame = 1
Query: 7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKS-AKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYD 684
+ VT QSL L KNL+RV +S + + R +FP CF E++Y MKI L + + + V+ +EA+ LT WLE GVF A+ RYLR + F I P HE E Y + + Y +D V + ++V K+ K + I+LIR+L+ F +TL LP R L++KL Y+D+RTPP ++P +F+ A + K LK+KIG++ +P + L L+F G D
Sbjct: 16 TSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFIEKSYIDMKIKHLQPKSENGN-----VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPTSLSCSAAIDERGAENAHEKVIETYQWKVGYTDDG---EVTLNASRVARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLAVEDKG------ALKVKIGNVVSPQYALELKFVGVD 247
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A4D9CRV9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRV9_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.650e-34 Identity = 86/246 (34.96%), Postives = 130/246 (52.85%), Query Frame = 1
Query: 7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKS-AKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYD 684
+ VT QSL L KNL+RV +S + + R +FP CF E++Y MKI L + + + V+ +EA+ LT WLE GVF A+ RYLR + F I P HE E Y + + Y +D V + +++ K+ K + I+LIR+L+ F +TL LP R L++KL Y+D+RTPP ++P +F+ A + K LK+KIG++ +P + L L+F G D
Sbjct: 16 TSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFIEKSYIDMKIKHLQPKSENGN-----VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPASLSCSAATDKRGGENAHEKVIETYQWKIGYTDDG---EVTLNASRIARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLAVEDKG------ALKVKIGNVVSPQYALELKFVGVD 247
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A6G0XR20_9STRA (HORMA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR20_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.590e-34 Identity = 82/230 (35.65%), Postives = 134/230 (58.26%), Query Frame = 1
Query: 1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNH----ENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVK--SAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRF 672
++++TETQS++++KN+IRVS+S +C+LR +FP + F+ER YA M I L D V++D AY +T WLE+G+F+A++ +YL + F I + EN E+Y++ + + F+GT + + K++ I +IR+L+S NTL LP+ R + +K+ Y +D P GWQP YF+ A EL GK LK+ +G + TP H++S++
Sbjct: 29 ASTKITETQSISVIKNMIRVSVSEICYLRNLFPEEVFKERVYADMHIKCLAPVEGSRDP---VMRD--AYCVTQWLEAGMFEAMDKKYLAQSVFCIYAVGKNKTPENLLESYTYKFKNSSEGSQLSTSFTGTHPVDSRPENVKSQAIQMIRNLVSITNTLEPLPKNRFVTMKMTY-NDSCPSGWQPKYFK-AVTDELGETFGKPT------LKLDVGQMATPFHSISMKL 245
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A835YQL7_9STRA (HORMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL7_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.740e-33 Identity = 80/237 (33.76%), Postives = 128/237 (54.01%), Query Frame = 1
Query: 7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHE-------NP---REAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT 687
+ V ++QS +VKN ++ ++S +C+ R +FPA CF E+ Y G KI +T + W+E GV +A++ +YLR++EFII P E +P +E YS+ SY + V G T + K + IR I F NTL LP ER++ +K++Y++D TPPG+QPD+F++A S L+ + + + ++I ++TP+HTL LRF G D+
Sbjct: 21 TSVNQSQSTMVVKNTLKATVSIICNARLLFPANCFIEKDYCGEKIIIEQVST-----------------MQDWIERGVCQAMDLQYLRKLEFIIAKPGEEAADGTKISPDCVQERYSWGFSYSSGE----VHLDGVGDYTRATMKQHIRQFIRLTIMFANTLEALPTERLITMKMFYYEDITPPGYQPDFFQDAPASMLSTFG--DEVVATNVVTVRIAHVETPYHTLKLRFEGIDS 234
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: UPI000711C540 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711C540) HSP 1 Score: 129 bits (324), Expect = 5.210e-32 Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 1
Query: 58 VSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESG------VFKAVEHRYLRRMEFIIM-SPNHENPR---EAYSFDLSYPEDQGDDAVIF---SGTKVTTVKSAKNELIN-----LIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
VSIS +C+LR +F CF ++ YAG+ I L + +E +++QEA+ LT WLE G + A+E RYLR + F I +P H+ E YS+ +YP+ + S T + + KN+ + L+R+LI+ +TL LPRER + I+L+Y+DD TPP +QP YF D + + G S + D I+ G L+TP+HT+ ++ R
Sbjct: 6 VSISEICYLRNLFDGDCFSQKNYAGVMINALHPIDKKEGEEEPHIRNQEAWQLTRWLEEGYLSPSFILDALEKRYLRGLVFAIYDNPEHKEQSKLLETYSYAFTYPDSTNITLEMTRNNSETNLLSTDGVKNQAYSDIQVILLRTLITLCSTLNPLPRERWITIQLYYYDDITPPDYQPKYFE--DTAGATIRPGDSSF-VSDPFVIEAGRLRTPYHTMCMKVR 226 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10683.628.1 >prot_Ecto-sp13_S_contig10683.628.1 ID=prot_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=266bp GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLback to top mRNA from alignment at Ecto-sp13_S_contig10683:271..5024+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10683.628.1 ID=mRNA_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4754bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10683:271..5024+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10683:271..5024+ >mRNA_Ecto-sp13_S_contig10683.628.1 ID=mRNA_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10683:271..5024+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |