mRNA_Ecto-sp13_S_contig10683.628.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10683.628.1
Unique NamemRNA_Ecto-sp13_S_contig10683.628.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: D8LFC6_ECTSI (Homologue of the meiosis-specific protein HOP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC6_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 3.280e-173
Identity = 254/264 (96.21%), Postives = 259/264 (98.11%), Query Frame = 1
Query:    7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQPRREDPDATTADGGNNSSDESDEDSDGEGSSDGR 798
            +QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQ D+AVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIH+KLKIKIGDLQTPHHTLSLRFRGYDTQEQ  REDPDATTADGG+NSSD+SDEDSDGE S DGR
Sbjct:   45 AQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQEDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHNKLKIKIGDLQTPHHTLSLRFRGYDTQEQSHREDPDATTADGGSNSSDDSDEDSDGERSCDGR 308          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A6H5L5T0_9PHAE (HORMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T0_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 4.730e-105
Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 1
Query:  274 MEFIIMSPNHENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQPRREDPDATTADGGNNSSDESDEDSDGE 780
            MEFIIMSPNHENPREAYSFDLSYPEDQGD+AVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKN KSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQ  REDPDATTADGGNNSSD+SDE SDGE
Sbjct:    1 MEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNCKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQSHREDPDATTADGGNNSSDDSDEYSDGE 169          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: D8M718_BLAHO (HORMA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M718_BLAHO)

HSP 1 Score: 148 bits (373), Expect = 2.220e-39
Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1
Query:   13 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR-----EAYSFDLSYPEDQGDDAVIFSGTK--VTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
            VT+ QSL +VKN+IR SIS +C+LR +F   CF ++ YAG+ I  L        + E  + + EA+ LT WLE GVF A+E RYLR + F I   N EN       E YS+  +YP+ Q     +    +  V +    KN+ + L+R+LI+  +TL  LPRER + ++L+Y+DD TPP +QP YF   D ++ + + G S   I D   I+ G L+TP H + ++ R
Sbjct:   10 VTQQQSLAVVKNMIRTSISEICYLRNLFDEDCFCKKNYAGIMINALHPMDTKEGS-EPHIHNSEAWQLTRWLEEGVFDALEKRYLRGLVFAIYD-NPENKSQSRLIETYSYAFTYPDTQHIQLEVKQNNERSVVSTDGVKNQAVILLRTLITLCSTLSPLPRERWITLQLYYYDDITPPDYQPAYFE--DTADSSIRPGDSSF-ISDPFVIEAGRLRTPFHAMCMKVR 232          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A196S9B0_BLAHN (HOP1, HORMA domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9B0_BLAHN)

HSP 1 Score: 145 bits (367), Expect = 1.890e-38
Identity = 84/237 (35.44%), Postives = 129/237 (54.43%), Query Frame = 1
Query:   13 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR----EAYSFDLSYPEDQGDDAVIFSGT--KVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRT----------PPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
            V++ QSL +VKN++R SIS +C+LR +F   CF ++ YAG+ I  L   T   + D+  + +QEA+ LT WLE GVF A+E RYLR + F I     +  +    E YS+  +YP+       +       V T    KN+ + L+R+LI+  +TL  LP ER + ++L+Y+DD T          PP +QP YF   D +  +   G S   + D   I+ G L+TP+H + ++ R
Sbjct:   10 VSQQQSLAVVKNMVRTSISEICYLRNLFNEDCFSQKNYAGIMINALHPVTNGKEGDQPQIHNQEAWQLTRWLEEGVFDALEKRYLRGLVFAIYDHPEDKQKSRLLETYSYAFTYPDTTNITLEVTQNNDKSVVTTDGVKNQAVILLRTLITLCSTLNPLPNERWVTMQLYYYDDVTVGSHSHHHIKPPDYQPKYFE--DTATASITPGSSTF-VADPFVIETGKLRTPYHAMCMKVR 243          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: W4FWS5_9STRA (HORMA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWS5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.200e-38
Identity = 88/235 (37.45%), Postives = 141/235 (60.00%), Query Frame = 1
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMS----PNHENPREAYSFDLSYPEDQGDDAVIFSGTKV--TTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT 687
            G S++TETQSL ++KNLIRVSIS +C+LR +FP + F+ER YA M+I  L  A ++   D+++   Q+AY +T WLE+G F A+E +YL ++EF I +       +N  E Y++ +    +    +  F+GT+   +  +  K + + +IR+L+S  NTL  LP+ R + +KL Y +D  P GWQP YF+E   S+L    G+S       LK+ +G + TP H +S++    ++
Sbjct:   30 GNSKITETQSLNVIKNLIRVSISEICYLRNLFPDEVFKERVYADMQIKCL--APQENSRDQSM---QDAYSITEWLEAGAFDAMEKKYLLQLEFCIYALGKNKTPQNLLECYTYKIKETSNGSTFSTSFTGTQNIDSHPEKVKTQAVQMIRNLVSITNTLEPLPKSRYITMKLSY-NDLCPSGWQPKYFKEL-TSDLGESFGEST------LKLDVGRMATPFHAISMKLEAAES 251          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: W7TNY4_9STRA (Horma domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNY4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.750e-34
Identity = 87/246 (35.37%), Postives = 130/246 (52.85%), Query Frame = 1
Query:    7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKS-AKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYD 684
            + VT  QSL L KNL+RV +S + + R +FP  CF E++Y  MKI  L   + + +     V+ +EA+ LT WLE GVF A+  RYLR + F I  P                    HE   E Y + + Y +D     V  + ++V   K+  K + I+LIR+L+ F +TL  LP  R L++KL Y+D+RTPP ++P +F+ A   +      K        LK+KIG++ +P + L L+F G D
Sbjct:   16 TSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFIEKSYIDMKIKHLQPKSENGN-----VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPTSLSCSAAIDERGAENAHEKVIETYQWKVGYTDDG---EVTLNASRVARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLAVEDKG------ALKVKIGNVVSPQYALELKFVGVD 247          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A4D9CRV9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRV9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.650e-34
Identity = 86/246 (34.96%), Postives = 130/246 (52.85%), Query Frame = 1
Query:    7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKS-AKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYD 684
            + VT  QSL L KNL+RV +S + + R +FP  CF E++Y  MKI  L   + + +     V+ +EA+ LT WLE GVF A+  RYLR + F I  P                    HE   E Y + + Y +D     V  + +++   K+  K + I+LIR+L+ F +TL  LP  R L++KL Y+D+RTPP ++P +F+ A   +      K        LK+KIG++ +P + L L+F G D
Sbjct:   16 TSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFIEKSYIDMKIKHLQPKSENGN-----VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPASLSCSAATDKRGGENAHEKVIETYQWKIGYTDDG---EVTLNASRIARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLAVEDKG------ALKVKIGNVVSPQYALELKFVGVD 247          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A6G0XR20_9STRA (HORMA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR20_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.590e-34
Identity = 82/230 (35.65%), Postives = 134/230 (58.26%), Query Frame = 1
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNH----ENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVK--SAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRF 672
             ++++TETQS++++KN+IRVS+S +C+LR +FP + F+ER YA M I  L       D    V++D  AY +T WLE+G+F+A++ +YL +  F I +       EN  E+Y++      +    +  F+GT     +  + K++ I +IR+L+S  NTL  LP+ R + +K+ Y +D  P GWQP YF+ A   EL    GK        LK+ +G + TP H++S++ 
Sbjct:   29 ASTKITETQSISVIKNMIRVSVSEICYLRNLFPEEVFKERVYADMHIKCLAPVEGSRDP---VMRD--AYCVTQWLEAGMFEAMDKKYLAQSVFCIYAVGKNKTPENLLESYTYKFKNSSEGSQLSTSFTGTHPVDSRPENVKSQAIQMIRNLVSITNTLEPLPKNRFVTMKMTY-NDSCPSGWQPKYFK-AVTDELGETFGKPT------LKLDVGQMATPFHSISMKL 245          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: A0A835YQL7_9STRA (HORMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.740e-33
Identity = 80/237 (33.76%), Postives = 128/237 (54.01%), Query Frame = 1
Query:    7 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHE-------NP---REAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT 687
            + V ++QS  +VKN ++ ++S +C+ R +FPA CF E+ Y G KI     +T                 +  W+E GV +A++ +YLR++EFII  P  E       +P   +E YS+  SY   +    V   G    T  + K  +   IR  I F NTL  LP ER++ +K++Y++D TPPG+QPD+F++A  S L+      +    + + ++I  ++TP+HTL LRF G D+
Sbjct:   21 TSVNQSQSTMVVKNTLKATVSIICNARLLFPANCFIEKDYCGEKIIIEQVST-----------------MQDWIERGVCQAMDLQYLRKLEFIIAKPGEEAADGTKISPDCVQERYSWGFSYSSGE----VHLDGVGDYTRATMKQHIRQFIRLTIMFANTLEALPTERLITMKMFYYEDITPPGYQPDFFQDAPASMLSTFG--DEVVATNVVTVRIAHVETPYHTLKLRFEGIDS 234          
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Match: UPI000711C540 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711C540)

HSP 1 Score: 129 bits (324), Expect = 5.210e-32
Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 1
Query:   58 VSISTVCHLRGIFPAKCFQERTYAGMKIYQLDAATRDADTDETVVKDQEAYDLTMWLESG------VFKAVEHRYLRRMEFIIM-SPNHENPR---EAYSFDLSYPEDQGDDAVIF---SGTKVTTVKSAKNELIN-----LIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 675
            VSIS +C+LR +F   CF ++ YAG+ I  L    +    +E  +++QEA+ LT WLE G      +  A+E RYLR + F I  +P H+      E YS+  +YP+       +    S T + +    KN+  +     L+R+LI+  +TL  LPRER + I+L+Y+DD TPP +QP YF   D +    + G S   + D   I+ G L+TP+HT+ ++ R
Sbjct:    6 VSISEICYLRNLFDGDCFSQKNYAGVMINALHPIDKKEGEEEPHIRNQEAWQLTRWLEEGYLSPSFILDALEKRYLRGLVFAIYDNPEHKEQSKLLETYSYAFTYPDSTNITLEMTRNNSETNLLSTDGVKNQAYSDIQVILLRTLITLCSTLNPLPRERWITIQLYYYDDITPPDYQPKYFE--DTAGATIRPGDSSF-VSDPFVIEAGRLRTPYHTMCMKVR 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10683.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFC6_ECTSI3.280e-17396.21Homologue of the meiosis-specific protein HOP1 n=1... [more]
A0A6H5L5T0_9PHAE4.730e-10596.45HORMA domain-containing protein n=1 Tax=Ectocarpus... [more]
D8M718_BLAHO2.220e-3939.04HORMA domain-containing protein n=1 Tax=Blastocyst... [more]
A0A196S9B0_BLAHN1.890e-3835.44HOP1, HORMA domain containing protein n=1 Tax=Blas... [more]
W4FWS5_9STRA2.200e-3837.45HORMA domain-containing protein n=2 Tax=Aphanomyce... [more]
W7TNY4_9STRA1.750e-3435.37Horma domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9CRV9_9STRA2.650e-3434.96Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6G0XR20_9STRA5.590e-3435.65HORMA domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A835YQL7_9STRA3.740e-3333.76HORMA domain-containing protein n=1 Tax=Tribonema ... [more]
UPI000711C5405.210e-3235.27hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10683contigEcto-sp13_S_contig10683:271..5024 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score505.4
Seed ortholog evalue1.7e-140
Seed eggNOG ortholog2880.D8LFC6
Preferred nameHORMAD1
Model size798
KEGG rclassRC00055,RC00523
KEGG koko:K01870,ko:K03294,ko:K12778,ko:K15620,ko:K17616
KEGG TC2.A.3.2
KEGG ReactionR03656
KEGG Pathwayko00970,ko04113,map00970,map04113
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000217,GO:0000226,GO:0000228,GO:0000280,GO:0000400,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000819,GO:0001701,GO:0001824,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004721,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006310,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007062,GO:0007098,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0007135,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0008150,GO:0008152,GO:0009553,GO:0009554,GO:0009555,GO:0009556,GO:0009790,GO:0009792,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030997,GO:0031023,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0033313,GO:0034293,GO:0034641,GO:0035825,GO:0036211,GO:0040020,GO:0042138,GO:0042578,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043934,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045132,GO:0045143,GO:0045144,GO:0045786,GO:0045835,GO:0046483,GO:0046605,GO:0048229,GO:0048232,GO:0048236,GO:0048285,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051026,GO:0051128,GO:0051129,GO:0051177,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051493,GO:0051598,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0060629,GO:0060631,GO:0061982,GO:0061983,GO:0065007,GO:0070013,GO:0070192,GO:0070193,GO:0070507,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0098813,GO:0099086,GO:0140013,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1903046,GO:2000241,GO:2000242
Exons6
EggNOG free text desc.regulation of homologous chromosome segregation
EggNOG OGsKOG4652@1,KOG4652@2759
EC6.1.1.5
Cds size798
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko01009,ko03016,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10683.628.1prot_Ecto-sp13_S_contig10683.628.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10683 271..5024 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462546.5780733-CDS-Ecto-sp13_S_contig10683:270..3971681462546.5780733-CDS-Ecto-sp13_S_contig10683:270..397Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 271..397 +
1681462546.590416-CDS-Ecto-sp13_S_contig10683:1946..20791681462546.590416-CDS-Ecto-sp13_S_contig10683:1946..2079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 1947..2079 +
1681462546.5990305-CDS-Ecto-sp13_S_contig10683:2709..28361681462546.5990305-CDS-Ecto-sp13_S_contig10683:2709..2836Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 2710..2836 +
1681462546.6119854-CDS-Ecto-sp13_S_contig10683:3757..38681681462546.6119854-CDS-Ecto-sp13_S_contig10683:3757..3868Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 3758..3868 +
1681462546.6218867-CDS-Ecto-sp13_S_contig10683:4367..45321681462546.6218867-CDS-Ecto-sp13_S_contig10683:4367..4532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 4368..4532 +
1681462546.6308868-CDS-Ecto-sp13_S_contig10683:4889..50241681462546.6308868-CDS-Ecto-sp13_S_contig10683:4889..5024Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10683 4890..5024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10683.628.1

>prot_Ecto-sp13_S_contig10683.628.1 ID=prot_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=266bp
GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTYAGMKIYQL
DAATRDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPN
HENPREAYSFDLSYPEDQGDDAVIFSGTKVTTVKSAKNELINLIRSLISF
GNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDK
EIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQPRREDPDATTADGGNNSS
DESDEDSDGEGSSDGR
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mRNA from alignment at Ecto-sp13_S_contig10683:271..5024+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10683.628.1 ID=mRNA_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4754bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10683:271..5024+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAACGAGTCAGGTGACGGAGACACAGTCTCTAACCCTGGTCAAGAACCT CATCCGGGTGTCCATCAGCACTGTTTGCCATCTACGCGGCATTTTCCCCG CCAAGTGCTTCCAGGAGCGGACCTACGGTAAGCCAGGGCCCTCGAATAGC TGGACAGAGGGCGGATGTCTACTTCAACTACTTGCTGTTGGTCGATCTAC ATACTCTAGGGCACCTCAATGGCCTATTGGGGATGTAGGCTTGTGGATGT TGACGATTGTCCCGTATTAGTCCTCGAAGAGGTGTCGTAGATTGTCGTCG AAAATATGTCCTAACGTGTTCTTGAGTTAGTGCGTGCTCTCTACGCAGTG TGTCGCGCGAGCAGAACAAGCCCTATGCAGCAATAACTACTGGTATGCAT AAGCAGAGCACCCGATTGTGCGAACTAATAGGCGCATGTCGAAGGCAAGC CTCAAGCGCTGCGTGTGAGCCTGTACGTGTCCTGTACAGCTGCAGCGCGG CGTACCAGCTCACTTGTTGTGCCGCTGGACTCTTAGTACGAGAGGCTTGG CTCTTGAGTACGCAGGAAGCCCGAAGGAGAAGAAGATCGGTTGGTGCAAA TGTGGTTACTTGATCAGTGGAGACCAGAACGAATGAAGAGAAACAAAGTG AAGCCACAGAGGTGGATTTCTCAAGAGAAGCAGAGGGTCGGAGAAGCAGA GGGTTAGAGAACCCCCGAAGAAGCAGAGTGAGAGGATGGGGCGAGTACGC GTACAGAACCAACGTGCAGTTCACACACCAACACATGTACGCGCCTAAGC TCCGGGTTGAAGGCGTGGCGTTTCAGCTTGATGACCGCCTTGCAAGGGGG GGTCTTCAGGCGGACCCTAGGCGACATCATGGAATCACACCTATCTGACA AGGTTGACCATTCACACGTGTGCAGAACACGGTACTGGTAAGCAACGATA AGTTTCTGGAAACATGACTTCAACGCCATGCTCTCGAACTTGTGCCACGT ATGCACATCAAGTATTGTACTTGCGCCCATAAGTACTGACGTACGACAAA ACGCAGGATGCACCTCCAACAATTGAACTGCTCTCAAGTAGTCATTCATT TAAGCACACAAGTCTGAATTACCTGCGGCGGAACATGTCCTTTCATACCC GCAAGTCGGAGATGCTTGCGACAACAACCCGATGCATACACATTCCGAGC ACGCAGGTCTGAGTTACTTGCACTGTAATATCTTCTGGAAGTCTACATGG GCTTTGCAGATTCTTTCTAGATATGAAACACAGAACATCAACCAACTATG AATGTCTCCTTATTCTGAATAACGGATCACACGGATTTTTACCTACGACT CGACATAGCGACATTGACAATGTTTGAACTCTACCAAATGCTGAAGCGCC AAATATTCCACCATGACCAATGACATTACCCCACGAAATGTCACGTAGTA TTTCCCCACAACCCGCCGTTGTGCCTACACTGATATGGGCTGAAACGTTT TCTACTAGCTGGATGCGCTCTCCTGCGCGCAGCAGGCTTCCTGCAGTTTA GCCCCAGCGGTGCTTGTACTTCTCCGAGCCGCAGTGAAATGATGCACTCC CGAATTTCCTCTAGTAGAGGAACCTGTGTATCTCCACTTGAAAACAACAC GACGATCGCCTCTGTGGTCAATGCAGCGGGCATGAAGATCTATCAGCTAG ATGCCGCGACGCGAGACGCCGACACTGACGAAACTGTTGTGAAAGATCAA GAAGCTTACGACCTCACCATGTGGCTCGAGTCGGGCGTCTTCAAGGCTGT CGAGCACAGGTTGGCGATTGAGGCTATTAGACGACATTGAGGCCGTTTTT TCACGGGGTTCCCAATGATATTGTGGCATTGTTCGCAAGTTTCGATCGAA CCTTCGAATCAGTTTAGATGTTCGGATCGTTTGAACGCTATACGAGGGCG AGACTGAGTGAGTTGCTGTGGGTTTCGGGTCGGGCAGGCATCAACCATCT CATTCGAGTGGTTGTTGATGGGATTGGGAATAGTGTACCGTTCAACAGGG GCCTGTGGAAATGACAAATATTTGTTCCTGATTTTATCAAGGGCACGGCG TCTCGACTCGAGCACCCTGGAGGCGGCATTCATTCCGGAGTGAATATGTT GGTTTATTTGGAGGATGTCGCAAAGTGCTCCTTGGAAATGCGCGATACGC GGGAGTGAATACGACGCTTAATCTGTATGTACGTACAACTGTTCGCCGAA CCCTCTTGCTCATATAGGTTCGAAGGTCGCGCTCAGGAACTAATCTTGTT TTCCTGGTGTTGGAGCTTCGAACACCGCAGACCGCGGAAGTCGGAGACTT CGCCTGCTCCATCGACAGTCAAGTTCCAACCATACCCGTTCATTTCCCGA GCGACGTCGTCCTCACTTCGTCGCATTCATCCCTACCAGGTACCTCCGGC GGATGGAGTTTATTATCATGTCCCCTAACCACGAGAACCCACGGGAGGCC TACTCCTTCGACCTCTCCTACCCAGAGGATCAAGGGGACGACGCCGTCAT CTTCAGCGGCACCAAGGTGTGCTAAAGCCCTTTTAGCGTGTCGTGCCTGT GCCATTAATAATTTAGGATATTGAATCAGCCTAACTGTTTCCACCATGTA CGTTCACAAGCGTGAAGCCTGGTGCTCTTCCGAAGTCCTCGCCCCCCTTC ACGGAGACGACCAGGAAAGGATGACCTTGAAATGCGAATCATTACTCAGC ACATCGCGGTGATTCGCGGGAAATCCGTGAGCAGAAGAACGGAATCCCCC GCGAAACAATATGCAACAACTTGAAAACATTGTGATGCACAAGAAGTTGT GGCTTTCGCGAGAATCTCGAAACGCAAGGCTCTTTGATATCGAGTCATTC AAAACATTCAAAAGACTACGGGTGTAAATTTTTTTTTTCGAAGACTAACG CCAAAAGACGTGTCCTACTTTAGGAGAAATTCAGGAACAAACAGAAAGAA AAGTCATCGCAGGTGCTAAACCGGTCGGCTAATGCCGTGCAGCATTTCCC CAAGCTAATACAAAATGTTTGATTTAGTGTAAGCATTTCGAGGGCGCTTC ATCCGTGCTACTGGCCTGAAGTATTTGTATTGGTTTTCTTTGGAAGAGTT TTTTGTGCTTCGATTTCAAGGCAATCGTGAGGTAGGAGCTCTTGCTAGCC GTCAACGCTGATTGACGTCAACATGCACTGGTGTGCTATTTACAATGTTG TAGGTTGTTCCTTCCTCAGCAAGGTCGCTCGTATGGTACAGTGTAACATA CTCTGGCGTGCACTTTCCTATCCCCATCAAGAGCCGGGTAGCCGCGTGGG GACGACTCTGCGAAGAACGAGTTCTCTTGATCGCTTCACACTAACCATTA CATCCAGGTGTAGCTGTTATTGAAAGACACATCTTTGGCAATGATGTGAT TGACGTTTTGTCATTGCTCGACTCGGTCGAACGGAAGGTGACTACCGTCA AAAGTGCCAAGAATGAGCTCATCAACCTGATCCGGTCACTCATTTCTTTC GGCAACACACTCGGAGAGCTTCCCAGAGAGCGGATTCTCAACATCAAGGT TGGTGCCAAGAAGTAGCCTCCGCGCAGTAGTCTACGAAGCAAAGTGGTTA AGCAAACATATGGGATACATTATCGAACTTGTGCTTAGGGGTTAGGCTTA GGGTTAGGGATGGGGCCTGCGTGCCCATTCCCTATTCTTTTTCTAGATAC TCTTAAAATCCTGCTAGGCGGTCCCCTCCGGGTGTTACGCCGCAAAATAC CGCTTGGTTGCGTCTTCACCTAGTTGCATTTTCTACACATGACCGACGGA TTCCACTCTGTGTGCACAAAAGAAACGGTGAACTGCCAAGTTTTACATTG AAGACTACAGGACGAAAGGGATAACAACTGTGAGAGTATCACGCGTTCGT CATGATTTTTCTCGTCTTTGCAATGTGTGGTAAGATGCATGCCGGAGAAC GTTTTACCGCGGGCCTGACCTCACCACGCATTGCCAATTTCCACCCAATA CTGTATCCTGTCGTTGCTGGCTGAATCTGATCGTCGGAATGTTTCAGTTG TGGTACTTCGATGACCGCACGCCGCCGGGGTGGCAGCCGGACTACTTCAG AGAGGCCGATCCCTCCGAGCTCGCCTTCAAGAACGGCAAGTCCGACAAAG AGATTCACGACAAGCTTAAGATCAAGATCGGCGACCTCCAGACGCCTCAT CACACGCTCTCGGTACGCCGTCGCTACATGTGACTGGCGCGCCTCGCGTG CGCGCTCCCTTCGACTACCCTTGGGGTGATGTTGACGCCATCTCTCTGCG ATGTGTATTCTGAAGATCGGAAATCAACGACGTCAAGACGTTGTAGCCGT GTGCCCAAGAACATTGAGTGCATCAATTGGTGTTGGTTCGCGAGACAATG TGCTGAAGCAACAAGTTTCCCTTCATGGAACGTCTGGAACGGTTTGGCCA GGGACCCTGCAATATCGGGAACAGCCACCACATCTAGTCAAAACATGTTT CCAAGGCCCGCCGCGGAAGCCGTGATTAACACAAGCGCGTCACGCATTTT CGTTTCGAATGCGGTACAGCTGCGGTTTAGGGGATACGACACGCAAGAGC AGCCGCGCCGCGAAGATCCAGACGCGACAACCGCAGATGGCGGCAACAAC TCGTCGGACGAAAGCGATGAAGATAGCGACGGGGAGGGGTCCTCCGACGG CAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10683:271..5024+

>mRNA_Ecto-sp13_S_contig10683.628.1 ID=mRNA_Ecto-sp13_S_contig10683.628.1|Name=mRNA_Ecto-sp13_S_contig10683.628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10683:271..5024+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAACGAGTCAGGTGACGGAGACACAGTCTCTAACCCTGGTCAAGAACCT
CATCCGGGTGTCCATCAGCACTGTTTGCCATCTACGCGGCATTTTCCCCG
CCAAGTGCTTCCAGGAGCGGACCTACGCGGGCATGAAGATCTATCAGCTA
GATGCCGCGACGCGAGACGCCGACACTGACGAAACTGTTGTGAAAGATCA
AGAAGCTTACGACCTCACCATGTGGCTCGAGTCGGGCGTCTTCAAGGCTG
TCGAGCACAGGTACCTCCGGCGGATGGAGTTTATTATCATGTCCCCTAAC
CACGAGAACCCACGGGAGGCCTACTCCTTCGACCTCTCCTACCCAGAGGA
TCAAGGGGACGACGCCGTCATCTTCAGCGGCACCAAGGTGACTACCGTCA
AAAGTGCCAAGAATGAGCTCATCAACCTGATCCGGTCACTCATTTCTTTC
GGCAACACACTCGGAGAGCTTCCCAGAGAGCGGATTCTCAACATCAAGTT
GTGGTACTTCGATGACCGCACGCCGCCGGGGTGGCAGCCGGACTACTTCA
GAGAGGCCGATCCCTCCGAGCTCGCCTTCAAGAACGGCAAGTCCGACAAA
GAGATTCACGACAAGCTTAAGATCAAGATCGGCGACCTCCAGACGCCTCA
TCACACGCTCTCGCTGCGGTTTAGGGGATACGACACGCAAGAGCAGCCGC
GCCGCGAAGATCCAGACGCGACAACCGCAGATGGCGGCAACAACTCGTCG
GACGAAAGCGATGAAGATAGCGACGGGGAGGGGTCCTCCGACGGCAGG
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