mRNA_Ecto-sp13_S_contig10662.612.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: D7FLQ8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ8_ECTSI) HSP 1 Score: 322 bits (824), Expect = 2.330e-97 Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDTL 483
LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVS RADNS+FMCPVYKTQQRGPTYVFDAFLRTK PVAKWVLAGVVLVMDTL
Sbjct: 4662 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSQRADNSVFMCPVYKTQQRGPTYVFDAFLRTKTPVAKWVLAGVVLVMDTL 4822
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A7S4D882_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D882_HETAK) HSP 1 Score: 213 bits (543), Expect = 1.680e-60 Identity = 101/161 (62.73%), Postives = 122/161 (75.78%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDTL 483
L QL +W G+P + P V WL GLFNPQSFLTA+MQVTA+A LELDKLS+ TE+TKK D+ D++ P+R+GAY+ GL L+GARW+ LE+S PREM CPMP+I A V R D + + CPVYKTQ RGPTYV+ A LRTKA AKWVLAGVVL+MD L
Sbjct: 670 LAQLQEWAGNPGDLPLVVWLGGLFNPQSFLTAVMQVTAQANNLELDKLSIVTEVTKKADLGDVTAPAREGAYITGLYLEGARWDAANGCLETSLPREMSCPMPIIAVKAAVVTRVDPNAYACPVYKTQTRGPTYVYSANLRTKAKPAKWVLAGVVLIMDIL 830
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A7S3HGV9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGV9_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.910e-58 Identity = 91/161 (56.52%), Postives = 117/161 (72.67%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDTL 483
+ QL+DWV SP + P VTWL GLFNP SFLTA+MQ+ A+A LELDKL++ T++TKK+ + + ++DG Y++GL L+G WNL A LESSKPREM+ P+PVI + + + F+CPVYKTQQRGPTYVF L+TKA KWVLAGVV +MD L
Sbjct: 87 IAQLNDWVASPLDMPVVTWLPGLFNPPSFLTAVMQIVAQAQSLELDKLTLVTDMTKKLAPEEFTAAAKDGTYISGLYLEGGSWNLSAALLESSKPREMFSPLPVINIRPSIVDKFEPGTFLCPVYKTQQRGPTYVFSLQLKTKADPGKWVLAGVVSIMDIL 247
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A7S1UFN1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFN1_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.570e-57 Identity = 100/158 (63.29%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 7 QLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDT 480
QL+ WV +P E P VTWL G FNPQSFLTAIMQ TA+ LELDKLSV TE+TKKM+V DI++PSRDGA+V G ++GARWN Q +E S PREM+ MP+ A R D+S+FMCPVYKT+QRGPTYVF A LRTK+ AKWVLAG ++MDT
Sbjct: 1240 QLAGWVDNPSEIPLVTWLPGFFNPQSFLTAIMQTTAQEESLELDKLSVVTEVTKKMEVEDITMPSRDGAFVLGFYVEGARWNSQTNLIEPSLPREMFSQMPITNVKAAAVERVDSSVFMCPVYKTRQRGPTYVFSATLRTKSLPAKWVLAGAAILMDT 1397
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: F0XZT7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZT7_AURAN) HSP 1 Score: 206 bits (524), Expect = 4.370e-57 Identity = 97/159 (61.01%), Postives = 121/159 (76.10%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMD 477
L QL DW +P + P VTWLSGLFNP+SFLTA+MQ TA+A LELDKLSV+TE+TKK+D S+ S PSRDGAY++GL+L+GARW+L + LE S EM C MPVI C A S R +++++ CP YK +RGPTYVF A L+TKA AKW+LAG L+MD
Sbjct: 4503 LGQLRDWCAAPTDIPVVTWLSGLFNPESFLTAVMQTTAQAQNLELDKLSVATEVTKKLDPSEFSTPSRDGAYISGLALEGARWSLNSTMLEPSAAGEMTCAMPVINCKAAPSDRVESNVYYCPCYKHLRRGPTYVFSAPLKTKAAAAKWILAGTALIMD 4661
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A482RP24_9ARCH (Dynein_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RP24_9ARCH) HSP 1 Score: 192 bits (487), Expect = 4.610e-56 Identity = 91/159 (57.23%), Postives = 118/159 (74.21%), Query Frame = 1
Query: 7 QLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDTL 483
QL +W SPQE P VTWL GLFNPQSFLTAIMQ+TA+A LELDKLS+ T++TKK++ D + +++GAY++GL L+G +NL LES++PREM+ +PVI V+ R ++ +F CPVYKTQQRGPTYVF LR+K KWVLAGVV +M+ L
Sbjct: 194 QLGEWSSSPQEVPTVTWLPGLFNPQSFLTAIMQITAQAQNLELDKLSLVTDLTKKLNAEDFTSAAKEGAYIHGLFLEGGSFNLNQGVLESARPREMFSALPVINIRPVIMDRIESGVFSCPVYKTQQRGPTYVFSMQLRSKYDPGKWVLAGVVAIMEVL 352
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A7S2V049_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V049_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.210e-55 Identity = 86/164 (52.44%), Postives = 119/164 (72.56%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNS---MFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMDTL 483
L QL +W +P + P VTW+SGL NPQSFLTAI QV A+ ELDKL T+++K+ V ++ SRDGA+V G+ + GARW++ A +E+SKP+EM+CPMP+I AV + + DN+ +FMCP YKT+ RGPT+VF A L+TK+P A+WV+AGV L+MD +
Sbjct: 43 LTQLEEWSQNPLDIPKVTWISGLVNPQSFLTAICQVAAQKNSWELDKLITFTDVSKRTSVEEVEGSSRDGAFVIGMQMQGARWDINAMSVETSKPKEMFCPMPIINVRAVAADKTDNTKNDVFMCPCYKTEFRGPTFVFCAQLKTKSPSARWVMAGVALIMDVV 206
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A6G0XX07_9STRA (Dynein_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX07_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.450e-54 Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRAD-NSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMD 477
L QL +W +P + P VTWLSG+ NPQSFLTAIMQVTA+ LELDKL + T++ K+ + +++ PSRDGAY++GL L GARW+ ++ S P+EM+C MPVI C A+ + + D ++CP YKT+ RGPTYVF A L+TK+P A+WVLAGV L+MD
Sbjct: 103 LAQLDEWTQNPSDIPRVTWLSGMINPQSFLTAIMQVTAQKSQLELDKLVIQTDVIKRKN-TEVDAPSRDGAYIHGLFLMGARWDSNNSTVDKSFPKEMFCAMPVINCKAIQADKLDLKGSYLCPCYKTEFRGPTYVFSAQLKTKSPPARWVLAGVALIMD 261
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A6A3HDT3_9STRA (Dynein_C domain-containing protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HDT3_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.740e-54 Identity = 88/160 (55.00%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 LVQLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRAD-NSMFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMD 477
L QL +W +P + P VTWLSG+ NPQSFLTAIMQVTA+ ELDKL + T++ K+ + ++ PSRDGAY++GL L GARW++Q ++ S P+EM+ PMPVI C AV S + D ++CP YKT+ RGPTYVF A L++K+P A+WVLAGV L+MD
Sbjct: 115 LQQLEEWTQNPADIPRVTWLSGMINPQSFLTAIMQVTAQKNQWELDKLVIQTDVLKRRN-GEVDAPSRDGAYIHGLYLMGARWDIQNNTVDRSHPKEMFSPMPVINCKAVASDKLDIKGSYVCPCYKTEFRGPTYVFSAQLKSKSPPARWVLAGVALIMD 273
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Match: A0A7S1CH51_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH51_9STRA) HSP 1 Score: 188 bits (477), Expect = 6.250e-54 Identity = 86/158 (54.43%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 7 QLSDWVGSPQEPPAVTWLSGLFNPQSFLTAIMQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWNLQAQHLESSKPREMYCPMPVITCVAVVSPRADNS-MFMCPVYKTQQRGPTYVFDAFLRTKAPVAKWVLAGVVLVMD 477
QL +WV +P E P VTWL GL NPQSFLTAI Q TA+ ELDKL + T++TK++ + D+ SRDGAYV+G+ L GARW+ A ++ SKPREM+C +PV+ C +V + +A+ +++CPVYKT+QRGPT+VF A L+TK+P A+W+LAGV +V+D
Sbjct: 252 QLGEWVANPSEIPKVTWLGGLINPQSFLTAISQQTAQRNSQELDKLVIQTDVTKRV-LEDVDAHSRDGAYVHGMFLQGARWDTTASIVDKSKPREMFCELPVVNCRSVSADKAEEKGVYLCPVYKTEQRGPTFVFRAQLKTKSPAARWILAGVAIVLD 408 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10662.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10662.612.1 >prot_Ecto-sp13_S_contig10662.612.1 ID=prot_Ecto-sp13_S_contig10662.612.1|Name=mRNA_Ecto-sp13_S_contig10662.612.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp MQVTAKAGGLELDKLSVSTEITKKMDVSDISVPSRDGAYVNGLSLDGARWback to top mRNA from alignment at Ecto-sp13_S_contig10662:2080..4854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10662.612.1 ID=mRNA_Ecto-sp13_S_contig10662.612.1|Name=mRNA_Ecto-sp13_S_contig10662.612.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2775bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10662:2080..4854- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10662:2080..4854- >mRNA_Ecto-sp13_S_contig10662.612.1 ID=mRNA_Ecto-sp13_S_contig10662.612.1|Name=mRNA_Ecto-sp13_S_contig10662.612.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10662:2080..4854- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |