mRNA_Ecto-sp13_S_contig10660.609.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: D7FJI9_ECTSI (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI9_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 3.040e-151 Identity = 221/245 (90.20%), Postives = 233/245 (95.10%), Query Frame = 1
Query: 70 QQASTCFVPSVPAPVCTFGICVSHQPSSKMNTEYRYETMLTSGSVLAESQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVARPKAATKRRRGVEHVVACEVFHTV 804
++ CFVPS+ APVCTFGICVSHQP S+ EYRY+TMLTSGSVLAESQGAPEIR+ALEEGLRLQWSFGFPYTPKELPVLT+ FFPYPAGMQP+TAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSL VSRGRTWIASDS+LEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIA+YLA RSKDGVKDE+RDALWFVLAVARPKAATKRRRGVEHVVA EVFH+V
Sbjct: 9 RKVQRCFVPSILAPVCTFGICVSHQPRSRKRKEYRYDTMLTSGSVLAESQGAPEIREALEEGLRLQWSFGFPYTPKELPVLTNAFFPYPAGMQPATAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLLVSRGRTWIASDSQLEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIANYLA-RSKDGVKDELRDALWFVLAVARPKAATKRRRGVEHVVAWEVFHSV 252
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A836CR36_9STRA (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR36_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.680e-38 Identity = 88/220 (40.00%), Postives = 122/220 (55.45%), Query Frame = 1
Query: 136 SHQPSSKMNTEYRYETMLTSGSVLAESQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVARPKAATKRRRGVEHVVACEVF 795
+H S + +++Y+ + SV E+ G PE+ L E RLQW++GFP P + LTH F YPA MQ +TA HLLETV+ G SV DPFVGGGTV++EALRAGR G+DVSPL+LFV+RGRTW+ S + L L V A + + S + W+ + + A R E+ + LWFV + A +AA R V+ + +
Sbjct: 26 THAGSVRDKVQHQYDNIWE--SVRCETNGPPEVTRELVEASRLQWAYGFPQVPAGMTRLTHGFHYYPASMQAATAKHLLETVMPGTSVADPFVGGGTVLIEALRAGRKAYGADVSPLALFVARGRTWMPSAATLSALETLV-------AEHIAGVDSEGCSLRSWEPVRRVVQRASAQRP------ELAEPLWFVYSTALQQAAKARHSPRRRVLPPQFY 230
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A7S2G0U6_9EUKA (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G0U6_9EUKA) HSP 1 Score: 109 bits (273), Expect = 6.100e-24 Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 217 QGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEI 651
+GA + + L L QW+FGFP P+ LTH F+ YPAGMQ A +LL+T+ G +LDPFVGGGT ++E +R G +G+DVSPL+LF + TW+ S+ EL +RE ++ A R G D + E+
Sbjct: 21 EGASGLAEPLAAALCAQWAFGFPRVPRPAAQLTHGFYQYPAGMQAVAAVNLLKTMPPG-VLLDPFVGGGTTLIEGMRCGWKTIGADVSPLALFATTHHTWLMSEEELASMREQAVAIISAVDPSYDVQLARPTPGAGVDDVAGEV 164
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A812IMW5_SYMPI (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IMW5_SYMPI) HSP 1 Score: 105 bits (263), Expect = 1.380e-22 Identity = 71/178 (39.89%), Postives = 90/178 (50.56%), Query Frame = 1
Query: 217 QGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDE--IRDALWFVLAVARPKA 744
+G E+ D L + LR QW +G+P P LTH FF Y A MQ TA LL + S+LDPF G GTV++EA RAGR GSD SPL+ FV+R T + S L+ELR V A +LG W+ + RS+ G E + ALWF L VA +A
Sbjct: 23 EGPSEVTDLLADALRYQWLYGYPGVPDGEEQLTHGFFKYVASMQALTARQLLRLNPSASSILDPFCGSGTVLIEAARAGRAATGSDASPLAAFVARHHTDVEGVS-LDELRAQADVVAPANELELG-----------WNDL----------RSRLGALPEGSVTSALWFCLLVALQRA 178
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A1Q9CXJ7_SYMMI (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CXJ7_SYMMI) HSP 1 Score: 103 bits (256), Expect = 4.880e-21 Identity = 67/174 (38.51%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 214 SQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLG-VGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVA 732
SQG I + LE L QW +G+P P LTH + Y AGMQP TA + + ++VLD F G GTV+VE L AG+ +GSD SPL++FVS T D+ L+ V+ AA K G W + + D + + SK+ V E+RD LWF AVA
Sbjct: 1346 SQGDQTIAERLERALEYQWLYGYPRVPDYEKQLTHGAYKYMAGMQPMTAREIYSLIPESKTVLDTFCGSGTVLVEGLVAGKQKCIGSDTSPLAIFVSTHHT----DAHRLSLKNFVQEAENVAADK----------GLGW----TSLRDRIRSISKESVTPELRDGLWFAFAVA 1501
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A812SXJ5_9DINO (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812SXJ5_9DINO) HSP 1 Score: 102 bits (255), Expect = 5.400e-21 Identity = 66/174 (37.93%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 214 SQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLG-VGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVA 732
SQG I + LE L QW +G+P P LTH + Y AGMQP TA + + +++LD F G GTV+VE L AG+ +GSD SPL++FVS T D+ L+ V + AA K G W + + D + + SK+ V E+RD LWF AVA
Sbjct: 443 SQGDQTIAERLERALEYQWLYGYPRVPDYEKQLTHGAYKYMAGMQPMTAREIYSLIPESKTLLDTFCGSGTVLVEGLVAGKQKCIGSDTSPLAIFVSTHHT----DAHRLSLKNFVEEAEKVAADK----------GLGW----TSLRDRIRSMSKESVTPELRDGLWFAFAVA 598
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A7S4UV77_9DINO (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UV77_9DINO) HSP 1 Score: 100 bits (250), Expect = 7.830e-21 Identity = 67/178 (37.64%), Postives = 88/178 (49.44%), Query Frame = 1
Query: 214 SQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVARPKAA 747
S+G + + LE L QW +G+P P + LTH F Y AGMQP TA +L+ R VLDPF G GTV++EAL AG+ VG D SPL++F + +A E L S E AA+ L + +DW + IA + + ALWF LAVA AA
Sbjct: 22 SEGDVRVAEHLERALEYQWVYGYPRVPPDELQLTHGTFKYLAGMQPLTAREMLKLAPNARRVLDPFCGSGTVLIEALVAGKEAVGCDASPLAIFAATHHCDVAGVDTQELL-----STAEGAASDL------ERGEEDWQTLRERIASIPVGPTCE--------ALWFCLAVALHTAA 180
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A812J3M1_9DINO (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812J3M1_9DINO) HSP 1 Score: 101 bits (252), Expect = 1.640e-20 Identity = 66/174 (37.93%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 214 SQGAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLG-VGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIADYLAARSKDGVKDEIRDALWFVLAVA 732
SQG + LE L QW +G+P P LTH + Y AGMQP TA + + ++VLD F G GTV+VE L AG+ +GSD SPL++FVS T D+ L+ V + AA K G W + + D + + S++GV E+RD LWF AVA
Sbjct: 440 SQGDETTAEHLERALEYQWLYGYPRVPDYEKQLTHGAYKYMAGMQPMTAREIYRLIPESKTVLDTFCGSGTVLVEGLVAGKQKCIGSDTSPLAIFVSTHHT----DAHRLSLKSFVEEAEKVAADK----------GLGW----TSLRDRIRSISQEGVTPELRDGLWFAFAVA 595
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: C1N5M4_MICPC (Site-specific DNA-methyltransferase (cytosine-N(4)-specific) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N5M4_MICPC) HSP 1 Score: 99.8 bits (247), Expect = 5.320e-20 Identity = 56/128 (43.75%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 220 GAPEIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIAS--DSELEELREAVRSVCEAAAAKLGE 597
G ++ L +R+QW+ G+P TP+ P LTH F YPAGMQ + A LE L GR++LDPF GGGT +V + GR G DVSPL+ V+ R W S D+ L +R+A R+V E GE
Sbjct: 113 GPKDLSSILLAAMRIQWTHGYPNTPRGYPRLTHGFHEYPAGMQAAAASKALEA-LPGRALLDPFAGGGTTLVVGMADGRATKGVDVSPLACAVAAHRAWRPSGGDATLALMRDAARAVVERMDVTAGE 239
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Match: A0A813ANG3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813ANG3_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 1.450e-18 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = 1
Query: 229 EIRDALEEGLRLQWSFGFPYTPKELPVLTHPFFPYPAGMQPSTAHHLLETVLTGRSVLDPFVGGGTVIVEALRAGRLGVGSDVSPLSLFVSRGRTWIASDSELEELREAVRSVCEAAAAKLGETHTRQVSGKDWDCIESEIA-DYLAARSKDGVKDEIRDALWFVLAVA 732
E+ + + LR QW +G+P P+ LTH FF Y A MQ A LL + +VLDPF G GTV++EA AG+ GSD SPL+ FV+R T + S LEELR R++ E E++ D L R + +D + ALWF L VA
Sbjct: 3 ELTEPMANALRFQWLYGYPGVPEGQDQLTHGFFKYFASMQAMAARQLLWLNPSASTVLDPFCGSGTVLIEAALAGKAATGSDASPLAAFVARHHTDVERIS-LEELRAQARALAP----------------------EKELSWDDLRGRLRALKEDPVTSALWFCLLVA 148 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10660.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10660.609.1 >prot_Ecto-sp13_S_contig10660.609.1 ID=prot_Ecto-sp13_S_contig10660.609.1|Name=mRNA_Ecto-sp13_S_contig10660.609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp MSSSHGVFRIFAAGRRALSTMLQQQASTCFVPSVPAPVCTFGICVSHQPSback to top mRNA from alignment at Ecto-sp13_S_contig10660:2870..5585+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10660.609.1 ID=mRNA_Ecto-sp13_S_contig10660.609.1|Name=mRNA_Ecto-sp13_S_contig10660.609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2716bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10660:2870..5585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10660:2870..5585+ >mRNA_Ecto-sp13_S_contig10660.609.1 ID=mRNA_Ecto-sp13_S_contig10660.609.1|Name=mRNA_Ecto-sp13_S_contig10660.609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=825bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10660:2870..5585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |