mRNA_Ecto-sp13_S_contig1060.559.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1060.559.1
Unique NamemRNA_Ecto-sp13_S_contig1060.559.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A6H5KXL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 2.080e-261
Identity = 380/404 (94.06%), Postives = 385/404 (95.30%), Query Frame = 3
Query:  114 MTVAFRKASIFALLRLPCFAVLPNPRSKLLQHALCRRLAKAATTCSATASXXXXSHPPTLPTTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 1325
            MTVAFRKASIFALLRLPCFAV PNPRSKLLQHAL RRLA AATTCSATAS    SHPP   TTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVE DGTRNG+AYRHK SPTSLWLVEGRLLDLDDADRRWASASSV S DEQQS++QRE LALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLREL RAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWA+VLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR  GEGTWREAVTEAVRSTRAAFPGAGG VAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC
Sbjct:    1 MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATAATTCSATASSSPTSHPPIPATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLVEGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 404          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: D8LBU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI)

HSP 1 Score: 629 bits (1623), Expect = 8.010e-219
Identity = 312/323 (96.59%), Postives = 315/323 (97.52%), Query Frame = 3
Query:  357 MAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 1325
            MAEALLARGNWLETEPGVE DGTRNGKAYRHK+SPTSLWLVEGRLLDLDDADRRWASASSV S DE+ SREQRE LALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR  GEGTWREAVTEAVRSTRAAFPGAGG VAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC
Sbjct:    1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 323          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A836C895_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.920e-75
Identity = 158/390 (40.51%), Postives = 205/390 (52.56%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLV--EGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSP-------------------------------------------------------AGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFK 1313
            TL+V +  D A   M +A+LAR  W   + G +       +A+ H+    ++W+V  E  ++  D+ D  + S+  V SL               +DV+FLS+H A SG P+L  HPIG+PNP+    +GG PG+CPPP+PR+A CLREL  A   AGL S F+ T E THHGPWL+TPAMF EIGS+EEHWGR DAAEVWANVL  +L L  +P                                                       A   +W +L  A RA    F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G   G   WR AV EAV  TR+A PG   R+A    ALVDKKAF+A ++  +   L  L V   +K
Sbjct:   10 TLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPM-RAWEHRAG--NIWMVCLEDSMIRADNIDEAFTSSHGVSSL---------------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGC--RLA----ALVDKKAFKAAQKREVESLLEELAVRVEYK 372          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A432HW31_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH)

HSP 1 Score: 233 bits (594), Expect = 6.390e-66
Identity = 136/335 (40.60%), Postives = 182/335 (54.33%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALL 1274
            TLL+ S +D A     +ALL RG W E +P  E      G+ +RH   P  +W    R+L  D  D R+A+AS  +                  +V+FLS+H A SG P+L +H IGVP  S    S E GG  G   PP+PR A   R + +AA +  +   FD T+E THHGP L +P MF+EIGSSE HWGR DAAE WA+V++  LGLDG P  GD  W  L  + RA+    + IGGGHYAP+  D+ RR+  + GH +ASYAL+  R + E           G W  A+     STR +FPG      G V A +D+K+F+  +R A++
Sbjct:    5 TLLIVSAEDIASTVQGDALLGRGGWNEADPVEE------GRTWRHTSQPVHIWWFPERVLWADQLDERYAAASGAQV----------------REVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDGGPGLGD--WHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPG------GEVMAHLDRKSFKGWQRRAVI 309          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A2E6HJE8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6HJE8_9EURY)

HSP 1 Score: 219 bits (559), Expect = 6.410e-61
Identity = 129/340 (37.94%), Postives = 182/340 (53.53%), Query Frame = 3
Query:  318 LLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA--GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGV 1298
            L++ S  D A     EALL  G+W +   G+E +G        H +S   +W ++  LL  D  D RW SA+  +                  +V+F S+H A SG P+L VHP+G+P+     E   GG+P  CPPP+PRLA   RE+ +    + L   F  TLEVTHHGPWLETP++F+EIGS+ EHW R DAA++ A ++ + LGLDG   G   W   +P   A     V IGGGHYAP  G LA   G ++GHM+  ++L   + D E           G WR+A+  A+ STR AFP       G + A +D+K+F+  +R ++  HL  +G+
Sbjct:   17 LIIVSIPDIASLIQGEALLDLGDWQD---GMEVEGCST-----HSFSDARIWWLDSGLLWEDHLDSRWTSATGEKVC----------------EVIFPSRHSAASGQPSLTVHPVGIPHIGEEDEIPFGGKPASCPPPNPRLASWYREIRKCGSSSELSDEFSFTLEVTHHGPWLETPSLFIEIGSTPEHWPRRDAAKILAEIIWQGLGLDGGD-GIGTWDQHNPCKVA-----VGIGGGHYAPFIGRLAAHEGIWLGHMVGGHSLPMDKPDDESWDPLTGELPAGNWRQAINSAIESTRLAFP------KGEIWAYMDRKSFKGWQRQSIKRHLQDIGI 320          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A4D9D3I1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.130e-60
Identity = 138/357 (38.66%), Postives = 186/357 (52.10%), Query Frame = 3
Query:  318 LLVGSKQDAAGRAMAEALLARGNWLETEP-------GVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIG------VPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLAR-RSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAF--PGA------GGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSE 1322
            LL+ + +D A   M +ALLARG W E  P          PDG +N            +W +    L  D  D+ W +A   + + E               ++FLS+H A SG P+L +HPIG       P   +  E GG PGRC PPSPR+A   R+L  A ++AGL  +F+ TLE THHGPW   P MFVEIGS EE WGR DAA VWA+VL + LGL  +    ++     PAA   +   V  GGGHY PK  DL R R    VGH+LASY      ED    W+  + EA+++TR A+  P        GG+    V   +DKKAF++  R AL+++L + G++  FK ++
Sbjct:   37 LLLATTEDKASVNMLQALLARGGWEEITPVDASSRVWHRPDGPQN----------VFMWQITQGFLRADWLDKAWLTAHPSQRIQE---------------MIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSATEENGVSI----PAAEEPKLVIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFTGSEED----WKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 360          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A7J4GFD1_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=root TaxID=1 RepID=A0A7J4GFD1_9ARCH)

HSP 1 Score: 215 bits (548), Expect = 1.250e-59
Identity = 135/338 (39.94%), Postives = 183/338 (54.14%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKE---AGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR--EDG--EGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHR 1307
            TLL+ S+ D A   +  A+LA G W E E         +G  + H   P  L L++G  ++ D+ D   +SA  ++                  +V+ LS+H AKSG+PAL VH IGVP      E   AGGR G   PPSPR      EL R+A  +GL   FD TLE THHGP+L  P +++EIGS+EE W R DA+++WA V++ +LGLDGS    I W         E    + +GGGHYAP+   +  + G ++ H+LA+YAL+F    EDG   G WR +V E VR TR AFPG      G V A +D+K+F+  +R AL+  L  L V  R
Sbjct:    3 TLLLSSRADDASMNLYGAVLALGGWSEGEE------FGHGFVHFHSSQPVHLLLIDGLHINADEIDSAHSSAVDIDV----------------EEVLVLSRHAAKSGIPALTVHAIGVPGEVPHGEVGYAGGRKGSAVPPSPRFTAIFLELQRSASLSGLAEEFDITLETTHHGPFLTKPTLYIEIGSTEEEWSRRDASKLWAEVISTVLGLDGSTGQGI-WP-------GEGEVMIGLGGGHYAPRHTAVVNQGGFWMAHLLANYALEFDGPVEDGLPTGPWRHSVGEVVRKTREAFPG------GVVFAHLDRKSFKGWQRRALISELDELAVPVR 304          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A842PJE0_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842PJE0_9EURY)

HSP 1 Score: 215 bits (547), Expect = 2.520e-59
Identity = 130/334 (38.92%), Postives = 178/334 (53.29%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAAL 1271
            TLL+ S+ D A     +ALLARG W E           NG+++ H   P  LW    R+L  D+ + R++  S                 A   +V+FLS+H A SG+P+L +H IGVP  S    + E GG  G    P+PR A   R + +A  E GL   FD T+E THHGP L  P MF+EIGSSE HW R DAAE WA+V++  LGLDGS   GD  W +L    + +    + IGGGHYAP+  D+ R++  + GH LA YAL+  R + E           G W+ ++  A+ ST+ AFPG      G V A +D+K+F+  +R A+
Sbjct:    3 TLLIVSEPDIASTIQGDALLARGGWTEVTT------VENGRSWAHDRKPVHLWWFPDRVLMEDNLENRYSDGSG----------------ANVKEVIFLSRHFAASGLPSLTLHVIGVPGESPVGETAEFGGIKGEVVLPNPRFAEWYRRMHQAGIEHGLIPEFDMTIETTHHGPSLSVPTMFIEIGSSETHWDRRDAAEAWADVISEGLGLDGSNGLGD--WENLSSEQKGDAKVMLGIGGGHYAPRHTDVIRKTNCWAGHQLALYALEMTRPEDEDWDPITGVLPTGQWQHSIEVALESTKQAFPG------GQVIAHLDRKSFKGWQRQAV 306          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A2E6IAL8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6IAL8_9EURY)

HSP 1 Score: 212 bits (539), Expect = 5.240e-58
Identity = 137/343 (39.94%), Postives = 180/343 (52.48%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA---GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDG-SPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-EDGE----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGV 1298
            TLL+ S+ D A     +ALLARG W   EP        NGK + H  +   LW    R+L  D  D R++ A+                  + ++V+FLS+H A SG P+L +H IGVP  +   E    GG  G+   PS R AG  R +  AA +  L   F+ T+E THHGP L TP MF+EIGSSE HW R DAAE WA+V+ + LGLDG S  GD  W  L    R +    V IGGGHYAP+  D+ R++  + GH LASYAL+  + ED E          G W+ ++   V STRAAFP       G V A +D+K+F+  +R  +   L  L V
Sbjct:   19 TLLIVSEPDIASTIQGDALLARGGWSSCEP------VENGKVWVHDNAEVYLWWFGHRVLMEDHLDTRFSRAAGQ----------------VVNEVIFLSRHYAASGRPSLTLHVIGVPGETPKGEIAEFGGIKGQVVLPSTRFAGWYRLMCDAAHQHQLVPEFELTIETTHHGPCLTTPTMFIEIGSSESHWNRIDAAEAWADVIEKGLGLDGGSGVGD--WNSLSLEERKKAKVMVGIGGGHYAPRHTDVLRKTNCWAGHQLASYALEMCKPEDNEWEPDEGELPEGAWKHSIRVCVESTRAAFPD------GMVMAHLDRKSFKGWQRRVIKRWLKELNV 331          
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A075H6X3_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured marine group II/III euryarchaeote KM3_44_G05 TaxID=1456448 RepID=A0A075H6X3_9EURY)

HSP 1 Score: 209 bits (533), Expect = 3.030e-57
Identity = 128/333 (38.44%), Postives = 177/333 (53.15%), Query Frame = 3
Query:  315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-EDGE----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAAL 1271
            TLL+ S+ D A     +ALLARG W ET+          GKA+ H+ +P  LW    ++L  D  D R+ + ++   +D         +     +V+FLS+H A SG P+L +H IGVP  S      E GG  G    P+PR A   R +  A    GL   F+ T+E THHGP L  P MF+EIGSSE HW R DAAE WA+V+T  LGL+G P    NW +L    ++     + IGGGHYAP+  D+ R++  + GH +A YAL+  + ED E          G W  ++   V STR AFP      +G V A +D+K+F+  +R A+
Sbjct:    6 TLLIVSEPDIASTIQGDALLARGGWEETQT------IEGGKAWSHETAPVHLWWFPDKVLWQDRLDERYENGANA-GVDG--------AAVKVGEVIFLSRHFAASGRPSLTLHVIGVPGESPVGEEAEFGGIKGEVVLPNPRFASWFRMMSEAGERHGLIPEFEMTIETTHHGPCLSVPTMFIEIGSSESHWDRRDAAEAWADVITDGLGLEGKPKPG-NWSELTAHEKSVAKVMIGIGGGHYAPRHTDVLRKTDCWAGHQIAGYALEMEKPEDPEWDPITGELPAGQWNHSIRVCVESTRQAFP------SGQVIAHLDRKSFKGWQRQAI 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXL5_9PHAE2.080e-26194.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBU1_ECTSI8.010e-21996.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C895_9STRA4.920e-7540.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A432HW31_9ARCH6.390e-6640.60D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxI... [more]
A0A2E6HJE8_9EURY6.410e-6137.94D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A4D9D3I1_9STRA1.130e-6038.66Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7J4GFD1_9ARCH1.250e-5939.94D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=root TaxID=1... [more]
A0A842PJE0_9EURY2.520e-5938.92D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A2E6IAL8_9EURY5.240e-5839.94D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A075H6X3_9EURY3.030e-5738.44D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1060contigEcto-sp13_S_contig1060:2615..6550 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score630.6
Seed ortholog evalue5.2e-178
Seed eggNOG ortholog2880.D8LBU1
Model size2654
KEGG koko:K09716
Hectar predicted targeting categorysignal peptide
GOsGO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051499,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360
Exons4
EggNOG free text desc.D-amino acid catabolic process
EggNOG OGs2QRIE@2759,COG1650@1
Ec32 ortholog descriptionD-aminoacyl-tRNA deacylase
Ec32 orthologEc-27_002710.1
EC3.1.1.96
Cds size1215
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1060.559.1prot_Ecto-sp13_S_contig1060.559.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1060 2728..5224 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462541.2185383-UTR-Ecto-sp13_S_contig1060:2614..27271681462541.2185383-UTR-Ecto-sp13_S_contig1060:2614..2727Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1060 2615..2727 +
1681462541.2848825-UTR-Ecto-sp13_S_contig1060:5224..65501681462541.2848825-UTR-Ecto-sp13_S_contig1060:5224..6550Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1060 5225..6550 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462541.2350538-CDS-Ecto-sp13_S_contig1060:2727..32881681462541.2350538-CDS-Ecto-sp13_S_contig1060:2727..3288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1060 2728..3288 +
1681462541.2449749-CDS-Ecto-sp13_S_contig1060:3752..39271681462541.2449749-CDS-Ecto-sp13_S_contig1060:3752..3927Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1060 3753..3927 +
1681462541.2659929-CDS-Ecto-sp13_S_contig1060:4238..43171681462541.2659929-CDS-Ecto-sp13_S_contig1060:4238..4317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1060 4239..4317 +
1681462541.2769582-CDS-Ecto-sp13_S_contig1060:4824..52241681462541.2769582-CDS-Ecto-sp13_S_contig1060:4824..5224Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1060 4825..5224 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1060.559.1

>prot_Ecto-sp13_S_contig1060.559.1 ID=prot_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=405bp
MTVAFRKASIFALLRLPCFAVLPNPRSKLLQHALCRRLAKAATTCSATAS
SSSTSHPPTLPTTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVE
PDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQS
REQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGR
CPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEI
GSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAF
VCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEA
VRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFK
SSEC*
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mRNA from alignment at Ecto-sp13_S_contig1060:2615..6550+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1060.559.1 ID=mRNA_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1060:2615..6550+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACTCATACAGTACGCTCGGATAGCTGGAGATCTCGAGATTGTGTGCAGG TGTTATGCGGGGAGTGGTCAGCTAATAGCTAATAGTGTGAGTGTACACGT GCGAGTGAAGAGGATGACAGTGGCTTTCCGAAAGGCTAGCATTTTCGCCT TGTTGCGGCTGCCCTGTTTCGCTGTGTTGCCAAACCCACGAAGCAAATTG TTGCAGCACGCCCTGTGTCGCCGACTCGCAAAGGCAGCAACAACATGCTC CGCGACAGCATCATCATCATCAACAAGCCATCCCCCTACCCTTCCTACTA CCGCCACGGCGTCGACTCTTCTGGTCGGTTCAAAGCAAGATGCGGCGGGA CGGGCGATGGCGGAAGCTCTGCTTGCCCGTGGCAACTGGCTGGAGACGGA ACCTGGTGTTGAGCCTGATGGCACACGGAACGGGAAGGCGTACCGGCACA AGTATTCACCAACATCCCTCTGGTTGGTAGAAGGGAGGCTTCTCGATCTT GACGATGCGGACAGGAGGTGGGCTTCGGCATCGTCGGTAGAGAGCCTTGA CGAGCAGCAGTCACGGGAGCAGCGTGAATCCTTGGCTCTACCCAGCGATG TTGTGTTCCTGAGCAAGCACGTGGCCAAGTCTGGCGTCCCCGCGCTCTGC GTTCACCCCATCGGCGTCCCGAACGTGGGTTGCTGGGGAAGGGCGTCGGG GTATCTGTCGGTGGGAGTGTTCAGCTAGTAGGACATTGTTCTTCATGAAC TGCTGTGTACAGCAGTACTGCTATTTTTCCTGACTGCGCTGTGTCGCATC GTGCCGGACTTGTTCTCTCTGAACCCCCCTCAGCCGAAAAACACAACCAA CCGCCGTGCTGGACCCTAATTCTTATATGGTTTGGACTTGGAAGCAGTGA TTTGTTGACACCTTTTTTCAACGTCATTGTCTCGTCTACCGGGGTGCCCG GCATTTGTGCGGGCACCGGTGCAGTTGACACCCATCCCGTGTAACGTCTT GGCAACAATCATCCTGCACACATGATCCACGAAGCTTTCCTTGCACGAAA CAGAAGTGAATTCGTCGCGCCGTGTCCCGTCCGCGCGGCCCGCCGACCAA CAACCCGCCGACAACGCCATACATGTTCCGGTGACCAGCCGTCATCCTCA AAGGAAGCGGGAGGCAGACCTGGCCGATGTCCACCCCCGTCGCCGCGCCT GGCGGGCTGCCTAAGAGAGCTTGGCCGTGCAGCGCGAGAAGCAGGGCTGG ACAGCTCCTTCGACACCACGCTGGAAGTTACGCATCACGGCCCATGGTTG GAGACACCAGCGAGTGAGTGTGTGGGGGTAACGGTGCCGTTTCGCTTACC ATAGCGTTCAGCTACGGTATTTTCAGGGGTCCGTGTTTGTTCCATCCGGT AAAAAGAAGTGCTTCAGATTTGACCGCGCGTGAATTGACTGTGAAGATGC GATGGAACCACGTTCTAAGATACAGGTGTTGCTCGTGTACATGCTAGGAA TCACCGCGTTGTGTAGCTAACGATTTCCATGGCACATTGTGGAGTCATTT CTACGTGATTTTGTGTTCCATTCCTTACTGCTGTCTTCGTTCCTCCGTTT TGTTGCTGCAACCCCCGCCGACAGTGTTCGTCGAGATCGGCTCGAGCGAG GAGCACTGGGGACGAGCCGACGCGGCAGAGGTTTGGGCGAACGTTCTCAC AAGGTGCAGCGGCCCGAAATAATATGCTCGTGAGCGGGACAGCAAATAGC CCCCTCTGGCCGTGACGCACGCGCCCAATAAATAAATCATGTTCCTCGGA AAGCAGCATGGTGCAAAAAATTGGCACTCGTCAAGCTCTATGAGCAACTA TTATTAAAGTAATTGAAGTCGTTCTTGGGTTGCTGCTATTGTCAAGTTGT ATGAATCGTATTGCTTACGTTGGCACAAACAATTGCCCGCATATTGAGGT GGTCGGACTGGCACATCGACGTCGAATTTTGACCAGGGTACGGAATCTCA CGTTGTTTTTATGAGTGCTGGGCGAAGCGATGGATCCACGCTGTTGCACG ACACCCAGAGTGACAAACATTCTGATCACAACCGGTGTGCCAGCAAACAT GACCCGTTGACCCTTCCGGCCTGCTGTTGACTTTCCCCCGCACACATGAT GCGCAGTCATCTTGTCCTTTTATCGCGTCCCAAAATAAAAAACACGGCCC ATTCCCCCAGGATGCTTGGCCTCGATGGCTCACCAGCGGGCGACATCAAC TGGCGTGACCTGGACCCCGCCGCCCGGGCGGAGCGCTCCGCCTTCGTCTG CATCGGCGGGGGGCACTACGCGCCGAAGCCAGGCGACCTCGCCCGGCGCA GCGGCTCGTACGTCGGCCACATGTTGGCGTCATACGCGCTCGATTTCGGG CGGGAAGATGGGGAGGGCACGTGGCGGGAAGCAGTGACGGAGGCTGTGCG GAGCACCCGAGCGGCGTTTCCGGGTGCGGGGGGAAGGGTTGCTGGTGGGG TCGGGGCGTTGGTGGACAAGAAGGCGTTCCGGGCGCGAGAGCGCGCCGCG TTGTTGGAGCACCTCGGGACCCTTGGAGTGGAGCACAGGTTCAAGAGCTC GGAATGCTGATGGATGCAGCTCGCTTGCTGTGAATGTGGTACCCCACCCG CGTTGTGTTGTAGAGGATAGTTGTTGAACAGGTGAGCCGTAGACGAGCGG CGGAGCATCGTTCGTTTCGCACGCCTCCAGTAGAGGCTTTTCGCCATTGC CACCGTCGCGATCATCTTTACATTGCAAGTACGTACGAGAGAGGTCGTCG AGGAACGTACAGCCGTCCAATATGGGGCAATTAATTCCCATTCTGAATCG GCAAGTCATATCCGCTTGAAGGAAACCGCGATGGCGGCGCAGTAATTTCT CCTTTTGCTGCTCTCTCTCTTCCCTGTCTCTCTCGTCTTGGAAACGGCTT TCACGACTGCGCTCCAAACCTCGCTCGGCGCAACAAGCACCGCCTTGGTG GAAGCTGCCTTCAAGCTGTTGATTTGTTCGTTTCCAAGAGGATAAAACCT CCCCCGCCGCCGCAACCGGCTTGTGTAGGGGGGTGTTCTCGTGTAAACGC ATGCCGTAGTTGTTACACCACTTTTTATTGCAGCACAATGTTGCAAAAAA AGCTGCATTTCTGCAACTTTTCTTGTAGGTTTGCTAATGTACGCTCAGTA TGGGCACTAAAAGTTGCACAAAGGGTTCTGCAACTTTTTTCCGGAACGCT GCAATCTGGCCGAAAAATTTTGCAGCTTTTCTCGAGTCGGGAAGGGGTGA GAAAAGCTGCACGGCGGAAATTATACCGGTTCACGTCAAGCTGCTACCGC ACACGTAGACCCTCTCTAGCATCGATTATGGGAAGGCTGTGATCACCGAC ATCTGGACGAATATTTAACGAGTTGCCTCATGAATGGTATCTGGAAGGAG GTGATGCCATGGGCTGTTGGGAAATGCCAAGTTTTGGGGCCGTGAGGTGC TGAATGCGCCGGAAAAAAAGTTTGTCCTGTGCACGATCGCCAACGACCGC GAGCTGTTAGTTCAAGTTCGATGTTTTTGACCGCCACCGGTTTGGTTGTC CACGGATAACTTTCCGAAGGAGGAAGCAACAGCGATAGCAGGGCCGCTCG GTGGGAGGTAGCTCTCTGCTTCATAGTTCATGCCCAAGTTTCGGTGCCGT GGGGTACCGTGCGCATAAGGAATTTGTTTTTGGTCGACCCTAAAGTACCC ACGTCAGAGAGCGGTTGGTTCATGTTCTCAGGGACTGTGTGCGTATGGTT TAGTTTGTTTGAGCTTAGTCAACGGTCGAACACCGCTTTTTATGGCAGCA CAATGTTGCACGAAAAGCTGCAAACTTTTCCTCCTGCTTTTCGTCCAAAC TTTGTCAATGGAACTTTTGATGCACGCTTTTTATGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1060:2615..6550+

>mRNA_Ecto-sp13_S_contig1060.559.1 ID=mRNA_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1060:2615..6550+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACAGTGGCTTTCCGAAAGGCTAGCATTTTCGCCTTGTTGCGGCTGCC
CTGTTTCGCTGTGTTGCCAAACCCACGAAGCAAATTGTTGCAGCACGCCC
TGTGTCGCCGACTCGCAAAGGCAGCAACAACATGCTCCGCGACAGCATCA
TCATCATCAACAAGCCATCCCCCTACCCTTCCTACTACCGCCACGGCGTC
GACTCTTCTGGTCGGTTCAAAGCAAGATGCGGCGGGACGGGCGATGGCGG
AAGCTCTGCTTGCCCGTGGCAACTGGCTGGAGACGGAACCTGGTGTTGAG
CCTGATGGCACACGGAACGGGAAGGCGTACCGGCACAAGTATTCACCAAC
ATCCCTCTGGTTGGTAGAAGGGAGGCTTCTCGATCTTGACGATGCGGACA
GGAGGTGGGCTTCGGCATCGTCGGTAGAGAGCCTTGACGAGCAGCAGTCA
CGGGAGCAGCGTGAATCCTTGGCTCTACCCAGCGATGTTGTGTTCCTGAG
CAAGCACGTGGCCAAGTCTGGCGTCCCCGCGCTCTGCGTTCACCCCATCG
GCGTCCCGAACCCGTCATCCTCAAAGGAAGCGGGAGGCAGACCTGGCCGA
TGTCCACCCCCGTCGCCGCGCCTGGCGGGCTGCCTAAGAGAGCTTGGCCG
TGCAGCGCGAGAAGCAGGGCTGGACAGCTCCTTCGACACCACGCTGGAAG
TTACGCATCACGGCCCATGGTTGGAGACACCAGCGATGTTCGTCGAGATC
GGCTCGAGCGAGGAGCACTGGGGACGAGCCGACGCGGCAGAGGTTTGGGC
GAACGTTCTCACAAGGATGCTTGGCCTCGATGGCTCACCAGCGGGCGACA
TCAACTGGCGTGACCTGGACCCCGCCGCCCGGGCGGAGCGCTCCGCCTTC
GTCTGCATCGGCGGGGGGCACTACGCGCCGAAGCCAGGCGACCTCGCCCG
GCGCAGCGGCTCGTACGTCGGCCACATGTTGGCGTCATACGCGCTCGATT
TCGGGCGGGAAGATGGGGAGGGCACGTGGCGGGAAGCAGTGACGGAGGCT
GTGCGGAGCACCCGAGCGGCGTTTCCGGGTGCGGGGGGAAGGGTTGCTGG
TGGGGTCGGGGCGTTGGTGGACAAGAAGGCGTTCCGGGCGCGAGAGCGCG
CCGCGTTGTTGGAGCACCTCGGGACCCTTGGAGTGGAGCACAGGTTCAAG
AGCTCGGAATGCTGA
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