mRNA_Ecto-sp13_S_contig1060.559.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A6H5KXL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE) HSP 1 Score: 741 bits (1913), Expect = 2.080e-261 Identity = 380/404 (94.06%), Postives = 385/404 (95.30%), Query Frame = 3
Query: 114 MTVAFRKASIFALLRLPCFAVLPNPRSKLLQHALCRRLAKAATTCSATASXXXXSHPPTLPTTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 1325
MTVAFRKASIFALLRLPCFAV PNPRSKLLQHAL RRLA AATTCSATAS SHPP TTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVE DGTRNG+AYRHK SPTSLWLVEGRLLDLDDADRRWASASSV S DEQQS++QRE LALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLREL RAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWA+VLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR GEGTWREAVTEAVRSTRAAFPGAGG VAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATAATTCSATASSSPTSHPPIPATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLVEGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 404
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: D8LBU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI) HSP 1 Score: 629 bits (1623), Expect = 8.010e-219 Identity = 312/323 (96.59%), Postives = 315/323 (97.52%), Query Frame = 3
Query: 357 MAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 1325
MAEALLARGNWLETEPGVE DGTRNGKAYRHK+SPTSLWLVEGRLLDLDDADRRWASASSV S DE+ SREQRE LALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR GEGTWREAVTEAVRSTRAAFPGAGG VAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 323
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A836C895_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA) HSP 1 Score: 260 bits (665), Expect = 4.920e-75 Identity = 158/390 (40.51%), Postives = 205/390 (52.56%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLV--EGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSP-------------------------------------------------------AGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFK 1313
TL+V + D A M +A+LAR W + G + +A+ H+ ++W+V E ++ D+ D + S+ V SL +DV+FLS+H A SG P+L HPIG+PNP+ +GG PG+CPPP+PR+A CLREL A AGL S F+ T E THHGPWL+TPAMF EIGS+EEHWGR DAAEVWANVL +L L +P A +W +L A RA F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G G WR AV EAV TR+A PG R+A ALVDKKAF+A ++ + L L V +K
Sbjct: 10 TLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPM-RAWEHRAG--NIWMVCLEDSMIRADNIDEAFTSSHGVSSL---------------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGC--RLA----ALVDKKAFKAAQKREVESLLEELAVRVEYK 372
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A432HW31_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH) HSP 1 Score: 233 bits (594), Expect = 6.390e-66 Identity = 136/335 (40.60%), Postives = 182/335 (54.33%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALL 1274
TLL+ S +D A +ALL RG W E +P E G+ +RH P +W R+L D D R+A+AS + +V+FLS+H A SG P+L +H IGVP S S E GG G PP+PR A R + +AA + + FD T+E THHGP L +P MF+EIGSSE HWGR DAAE WA+V++ LGLDG P GD W L + RA+ + IGGGHYAP+ D+ RR+ + GH +ASYAL+ R + E G W A+ STR +FPG G V A +D+K+F+ +R A++
Sbjct: 5 TLLIVSAEDIASTVQGDALLGRGGWNEADPVEE------GRTWRHTSQPVHIWWFPERVLWADQLDERYAAASGAQV----------------REVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDGGPGLGD--WHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPG------GEVMAHLDRKSFKGWQRRAVI 309
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A2E6HJE8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6HJE8_9EURY) HSP 1 Score: 219 bits (559), Expect = 6.410e-61 Identity = 129/340 (37.94%), Postives = 182/340 (53.53%), Query Frame = 3
Query: 318 LLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA--GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGV 1298
L++ S D A EALL G+W + G+E +G H +S +W ++ LL D D RW SA+ + +V+F S+H A SG P+L VHP+G+P+ E GG+P CPPP+PRLA RE+ + + L F TLEVTHHGPWLETP++F+EIGS+ EHW R DAA++ A ++ + LGLDG G W +P A V IGGGHYAP G LA G ++GHM+ ++L + D E G WR+A+ A+ STR AFP G + A +D+K+F+ +R ++ HL +G+
Sbjct: 17 LIIVSIPDIASLIQGEALLDLGDWQD---GMEVEGCST-----HSFSDARIWWLDSGLLWEDHLDSRWTSATGEKVC----------------EVIFPSRHSAASGQPSLTVHPVGIPHIGEEDEIPFGGKPASCPPPNPRLASWYREIRKCGSSSELSDEFSFTLEVTHHGPWLETPSLFIEIGSTPEHWPRRDAAKILAEIIWQGLGLDGGD-GIGTWDQHNPCKVA-----VGIGGGHYAPFIGRLAAHEGIWLGHMVGGHSLPMDKPDDESWDPLTGELPAGNWRQAINSAIESTRLAFP------KGEIWAYMDRKSFKGWQRQSIKRHLQDIGI 320
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A4D9D3I1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.130e-60 Identity = 138/357 (38.66%), Postives = 186/357 (52.10%), Query Frame = 3
Query: 318 LLVGSKQDAAGRAMAEALLARGNWLETEP-------GVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIG------VPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLAR-RSGSYVGHMLASYALDFGREDGEGTWREAVTEAVRSTRAAF--PGA------GGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSE 1322
LL+ + +D A M +ALLARG W E P PDG +N +W + L D D+ W +A + + E ++FLS+H A SG P+L +HPIG P + E GG PGRC PPSPR+A R+L A ++AGL +F+ TLE THHGPW P MFVEIGS EE WGR DAA VWA+VL + LGL + ++ PAA + V GGGHY PK DL R R VGH+LASY ED W+ + EA+++TR A+ P GG+ V +DKKAF++ R AL+++L + G++ FK ++
Sbjct: 37 LLLATTEDKASVNMLQALLARGGWEEITPVDASSRVWHRPDGPQN----------VFMWQITQGFLRADWLDKAWLTAHPSQRIQE---------------MIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSATEENGVSI----PAAEEPKLVIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFTGSEED----WKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 360
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A7J4GFD1_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=root TaxID=1 RepID=A0A7J4GFD1_9ARCH) HSP 1 Score: 215 bits (548), Expect = 1.250e-59 Identity = 135/338 (39.94%), Postives = 183/338 (54.14%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKE---AGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR--EDG--EGTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGVEHR 1307
TLL+ S+ D A + A+LA G W E E +G + H P L L++G ++ D+ D +SA ++ +V+ LS+H AKSG+PAL VH IGVP E AGGR G PPSPR EL R+A +GL FD TLE THHGP+L P +++EIGS+EE W R DA+++WA V++ +LGLDGS I W E + +GGGHYAP+ + + G ++ H+LA+YAL+F EDG G WR +V E VR TR AFPG G V A +D+K+F+ +R AL+ L L V R
Sbjct: 3 TLLLSSRADDASMNLYGAVLALGGWSEGEE------FGHGFVHFHSSQPVHLLLIDGLHINADEIDSAHSSAVDIDV----------------EEVLVLSRHAAKSGIPALTVHAIGVPGEVPHGEVGYAGGRKGSAVPPSPRFTAIFLELQRSASLSGLAEEFDITLETTHHGPFLTKPTLYIEIGSTEEEWSRRDASKLWAEVISTVLGLDGSTGQGI-WP-------GEGEVMIGLGGGHYAPRHTAVVNQGGFWMAHLLANYALEFDGPVEDGLPTGPWRHSVGEVVRKTREAFPG------GVVFAHLDRKSFKGWQRRALISELDELAVPVR 304
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A842PJE0_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842PJE0_9EURY) HSP 1 Score: 215 bits (547), Expect = 2.520e-59 Identity = 130/334 (38.92%), Postives = 178/334 (53.29%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGREDGE-----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAAL 1271
TLL+ S+ D A +ALLARG W E NG+++ H P LW R+L D+ + R++ S A +V+FLS+H A SG+P+L +H IGVP S + E GG G P+PR A R + +A E GL FD T+E THHGP L P MF+EIGSSE HW R DAAE WA+V++ LGLDGS GD W +L + + + IGGGHYAP+ D+ R++ + GH LA YAL+ R + E G W+ ++ A+ ST+ AFPG G V A +D+K+F+ +R A+
Sbjct: 3 TLLIVSEPDIASTIQGDALLARGGWTEVTT------VENGRSWAHDRKPVHLWWFPDRVLMEDNLENRYSDGSG----------------ANVKEVIFLSRHFAASGLPSLTLHVIGVPGESPVGETAEFGGIKGEVVLPNPRFAEWYRRMHQAGIEHGLIPEFDMTIETTHHGPSLSVPTMFIEIGSSETHWDRRDAAEAWADVISEGLGLDGSNGLGD--WENLSSEQKGDAKVMLGIGGGHYAPRHTDVIRKTNCWAGHQLALYALEMTRPEDEDWDPITGVLPTGQWQHSIEVALESTKQAFPG------GQVIAHLDRKSFKGWQRQAV 306
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A2E6IAL8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6IAL8_9EURY) HSP 1 Score: 212 bits (539), Expect = 5.240e-58 Identity = 137/343 (39.94%), Postives = 180/343 (52.48%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA---GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDG-SPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-EDGE----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAALLEHLGTLGV 1298
TLL+ S+ D A +ALLARG W EP NGK + H + LW R+L D D R++ A+ + ++V+FLS+H A SG P+L +H IGVP + E GG G+ PS R AG R + AA + L F+ T+E THHGP L TP MF+EIGSSE HW R DAAE WA+V+ + LGLDG S GD W L R + V IGGGHYAP+ D+ R++ + GH LASYAL+ + ED E G W+ ++ V STRAAFP G V A +D+K+F+ +R + L L V
Sbjct: 19 TLLIVSEPDIASTIQGDALLARGGWSSCEP------VENGKVWVHDNAEVYLWWFGHRVLMEDHLDTRFSRAAGQ----------------VVNEVIFLSRHYAASGRPSLTLHVIGVPGETPKGEIAEFGGIKGQVVLPSTRFAGWYRLMCDAAHQHQLVPEFELTIETTHHGPCLTTPTMFIEIGSSESHWNRIDAAEAWADVIEKGLGLDGGSGVGD--WNSLSLEERKKAKVMVGIGGGHYAPRHTDVLRKTNCWAGHQLASYALEMCKPEDNEWEPDEGELPEGAWKHSIRVCVESTRAAFPD------GMVMAHLDRKSFKGWQRRVIKRWLKELNV 331
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Match: A0A075H6X3_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured marine group II/III euryarchaeote KM3_44_G05 TaxID=1456448 RepID=A0A075H6X3_9EURY) HSP 1 Score: 209 bits (533), Expect = 3.030e-57 Identity = 128/333 (38.44%), Postives = 177/333 (53.15%), Query Frame = 3
Query: 315 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKYSPTSLWLVEGRLLDLDDADRRWASASSVESLDEQQSREQRESLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR-EDGE----------GTWREAVTEAVRSTRAAFPGAGGRVAGGVGALVDKKAFRARERAAL 1271
TLL+ S+ D A +ALLARG W ET+ GKA+ H+ +P LW ++L D D R+ + ++ +D + +V+FLS+H A SG P+L +H IGVP S E GG G P+PR A R + A GL F+ T+E THHGP L P MF+EIGSSE HW R DAAE WA+V+T LGL+G P NW +L ++ + IGGGHYAP+ D+ R++ + GH +A YAL+ + ED E G W ++ V STR AFP +G V A +D+K+F+ +R A+
Sbjct: 6 TLLIVSEPDIASTIQGDALLARGGWEETQT------IEGGKAWSHETAPVHLWWFPDKVLWQDRLDERYENGANA-GVDG--------AAVKVGEVIFLSRHFAASGRPSLTLHVIGVPGESPVGEEAEFGGIKGEVVLPNPRFASWFRMMSEAGERHGLIPEFEMTIETTHHGPCLSVPTMFIEIGSSESHWDRRDAAEAWADVITDGLGLEGKPKPG-NWSELTAHEKSVAKVMIGIGGGHYAPRHTDVLRKTDCWAGHQIAGYALEMEKPEDPEWDPITGELPAGQWNHSIRVCVESTRQAFP------SGQVIAHLDRKSFKGWQRQAI 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1060.559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1060.559.1 >prot_Ecto-sp13_S_contig1060.559.1 ID=prot_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=405bp MTVAFRKASIFALLRLPCFAVLPNPRSKLLQHALCRRLAKAATTCSATASback to top mRNA from alignment at Ecto-sp13_S_contig1060:2615..6550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1060.559.1 ID=mRNA_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1060:2615..6550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1060:2615..6550+ >mRNA_Ecto-sp13_S_contig1060.559.1 ID=mRNA_Ecto-sp13_S_contig1060.559.1|Name=mRNA_Ecto-sp13_S_contig1060.559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1060:2615..6550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |