mRNA_Ecto-sp13_S_contig106.557.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig106.557.1
Unique NamemRNA_Ecto-sp13_S_contig106.557.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 6.470e-77
Identity = 149/212 (70.28%), Postives = 159/212 (75.00%), Query Frame = 3 
Query:  114 MPVPREDAKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKALGV--TPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPLHLAIGG-GGDARIAKDLXXXXXXXXXXXXXXXXXXXXAARQGRHDLVHALAHKGADLDARDAEG 740
            MP PREDA+ DRVKILGDAADMI KLMCDRATS QW EWLRAPLEHAAGTAN+DLV+KLLKAGADGSAGWRGCDD TLLHAA       VVTALIRAG GED+EAK  G   TPLHVAV  G+EAAARV++LAGADVNA D N DTPLHLAIG  G DARIA+DL                    AA  GRHD+VHALAH  ADLDA D +G
Sbjct:    1 MPAPREDAE-DRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAASHGRHDVVHALAHTRADLDALDGKG 211
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 2.210e-67
Identity = 237/464 (51.08%), Postives = 250/464 (53.88%), Query Frame = 3 
Query:  114 MPVPR-EDAKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEE-VVTALIRAGDGEDIEAKALGV---TPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPL-HLAIGGGGDAR------------------------------------------------------------------------------IAKDLXXXXXXXXXXXXXXXXXXXXAARQGRHDLVHALAHKGADLDARDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAVDRRGVFTPSALMPAISQAGDRDRPRLERLAALLEKAPQDRAWR 1253
            MP PR ED  +DR KILGDAADMI +LMCDRATS QWAEWLRAPLEHAAGTANQDLV+KLLKAGA+GSAG RGCDD TLLHAAAEGGNEE VVTALI+AG  EDIEAK +G+   TPLHVAVATGKEAAAR MMLAGADVNAADRN DT L  L IG  G AR                                                                              +  D+                    AARQGRHD+VHALA+KGADLDA D EG                                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      GV TPSALMP I+QA +RDRPRLERL ALLEKAPQDRAWR
Sbjct:    1 MPWPRREDDAEDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTLLDLVIGCRGFARDCPIHAAVLVNSWLLGKICCIDETLDQENRSKGGVSWVGAQHPSSITLGHSPDHAYSPNTDRCMERANALSYVLHILGLIPDIQTILSDSLRFCRYTCLYLEHAARQGRHDVVHALAYKGADLDALDDEGMTPISLGTNLSKTALHVAVKCNKAGAIPAFIEAGADIEARTSLGRSPLWYVAWKGPCAAMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------GVTTPSALMPVIAQADERDRPRLERLTALLEKAPQDRAWR 442
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.280e-66
Identity = 125/146 (85.62%), Postives = 133/146 (91.10%), Query Frame = 3 
Query:  114 MPVPREDAKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKALGV---TPLHVAVATGKEAAARVMMLAGADVNAADRNDD 542
            MP PREDA+ DR K LGDAA +I KLMCDRATS QWAEWLRAPLEHAAGTANQDLV+KLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAL+RAG GED+EAK LG+   TPLHVAVATGK+AAARV+MLAGADVNAADRN D
Sbjct:    1 MPAPREDAE-DRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.180e-52
Identity = 232/482 (48.13%), Postives = 275/482 (57.05%), Query Frame = 3 
Query:  141 KDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKAL--GVTPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPLHLAIGGGGDARIAKDLXXXXXXXXXXXXXXXXXXXXAARQGRHDLVHALAHKGADLDARDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAVDRRGVFTP-SALMPAISQAGDRDRPRLERLAALLEKAPQDRAWRRRGFLVLCRAHPERLRLVEEIPDMAAGSTGQPRERPSQRARTGKVKVEVELGGRHGXXXXXXXXXGSRDARAEGRAGHRRPGVGFGVAAAWLMSVADEGVFRKIVGFL 1577
            ++R  IL D  D I KL+CDRAT  QWAEWLRAPLEHAAGT N+DLV KLL AGA+  AGWRGC  KTLLHAAAEGGN  V+T+L RAG G D++AK+L  G TPL +AV  GKEAAA+ +++AGADVN  D  +D  LH               XXXXXXXXXXXXXXXXXXXX A  G  ++V AL  KG DL+  +++G                                                                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          T  S +M  ++++ +  RP  ER++ LL +APQDRAWRRRGFLVLCRAHP+R+RL  +IP  AA +T   +ERP                    XXXXXXXX G+R AR E  A       GF   +AW+M++ +E +FRKIVGFL
Sbjct:    5 EERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEATEGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAR-ARIE--AAREGTVCGFDGFSAWMMALTEENLFRKIVGFL 482
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.980e-44
Identity = 232/458 (50.66%), Postives = 263/458 (57.42%), Query Frame = 3 
Query:  261 TANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKALGV--TPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPLHLAIGGGGDARIAKDLXXXXXXXXXXXXXXXXXXXXAARQGRH--------DLVHALAHKGADLDARDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAVDRRGVFTPSALMPAISQAGDRDRPRLERLAALLEKAPQDRAWRRRGFLVLCRAHPERLRLVEEIP---DMAAGSTGQPRERPSQRARTGKV-KVEVELGGRHGXXXXXXXXXGSRDARAEGRAGHRR-----PGVGFGVAAAWLMSVADEGVFRKIVGFL 1577
            TAN +LV KLL+AGADG  GWRGC DKTLLHAAA+GG+  VV+ L RAG   D EA+A G   TPLH+AV  G  A A+ + +A ADVN  D         A+ GG         XXXXXXXXXXXXXXXXXXXX               D+V ALAHKG DL+                                                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + AVD +G  TPS  +PAI++A D D  RLERL+ LL +APQDRAWRRRGFL LCRAHP+RLRLV EIP   D A+G   Q +ERPS+RAR G+  KV+VE+   HG          S       RAG  R      G GF  AA WL+++A+E VFRKIVGFL
Sbjct:   21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLD---------AMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGS-TPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHG----------SVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 6.140e-39
Identity = 86/136 (63.24%), Postives = 102/136 (75.00%), Query Frame = 3 
Query:  141 KDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKAL--GVTPLHVAVATGKEAAARVMMLAGADVNAADRNDD 542
            ++R  IL D  D   KL+ DRAT  QWAEWLRAPLEHAA T N+DLV KLL AGA+G AGWRGC  KTLLHAAAEGGN +V+T L  AG GED++AKAL  G TPL +AV  GKEAAA+ +++AGA+VN  D  +D
Sbjct:   47 EERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATND 182
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 8.200e-37
Identity = 80/132 (60.61%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:  141 KDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDI--EAKALGVTPLHVAVATGKEAAARVMMLAGADVNAAD 530
            +DR   L    DMI+ L+CD AT RQW +WLR PLEHAAGT N  LV+KLLK GA+ SAGWRGCD +TL+HA AEGG+E+V++ L RAG G+ I  +A   G+TPLH+AV+ GK AA +V+MLAGADVN  D
Sbjct:    5 QDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLD 136
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.710e-33
Identity = 138/481 (28.69%), Postives = 177/481 (36.80%), Query Frame = 3 
Query:  141 KDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKALGV--TPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPLHLAIGGGGDARIAKDLXXXXXXXXXXXXXXXXXXXXAARQGRHDLVHALAHKGADLDARDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAVDRRGVFTPSALMPAISQAGDRDRPRLERLAALLEKAPQDRAWRRRGFLVLCRAHPERLRLVEEIPDMAAGSTGQPRERPSQRARTGKVKVEVELGGRHGXXXXXXXXXGSRDARAEGRAGHRRPGVGFGVAAAWLMSVADEGVFRKIVGFL 1577
            K+R  IL D  D I KL+CD AT  QWAEWLRAPLEHAA T                                               G G DI+AKA     TPL + V  GKEAAA+ +++AGAD +  +                 R+AKDL                    AA  G  ++V A+  KG DL+  + +                                                                                                                             + A+D  G      +M  I++A    RP LERL+ LL +APQDRAWRRRGFLVL R HP+R+RL  EIP  AA +T QP++RP +RA TG+V+V+   GG         X   S   RA   A H     GFG  +AW+M++ +EGVFR+IVGFL
Sbjct:    5 KERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAAT-----------------------------------------------GAGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMWEH----------------RVAKDLLLSGANPIQAGSNGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNK------------------------------------------------REIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGG-------GGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.100e-28
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 3 
Query:  120 VPREDAKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGED 419
            +PR    +DR  IL  + D   +L+CDRAT  QWAEWLRAPLEHAA TA+ DLV+KLL AGA+GS GW GCD KTLLHAAAEGGN +V+ AL+RAG   D
Sbjct:    1 MPRSSRYEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGD 100
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BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.460e-26
Identity = 73/134 (54.48%), Postives = 90/134 (67.16%), Query Frame = 3 
Query:  135 AKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGTANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDGEDIEAKALGV--TPLHVAVATGKEAAARVMMLAGADVNAAD 530
            A++DR  + G    M+ KL+ ++A S QW+EWLRAPLEHA    + DL   LLKAGADGSAGW GC D+TLL AAAEGGNEEVV  L+  G  E+++  +     T LH A+A G   AARV+MLAGADV   D
Sbjct:    3 AEEDRTALNG-LEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNERTALHRALAGGHTEAARVLMLAGADVGLLD 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig106.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQP2_ECTSI6.470e-7770.28Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JXY4_9PHAE2.210e-6751.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP1_ECTSI3.280e-6685.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2A3_ECTSI1.180e-5248.13Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5KB54_9PHAE1.980e-4450.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ7_ECTSI6.140e-3963.24F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
D7FM65_ECTSI8.200e-3760.61Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5JU78_9PHAE4.710e-3328.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPN3_ECTSI1.100e-2864.00Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
D8LKW6_ECTSI1.460e-2654.48Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig106contigEcto-sp13_S_contig106:33574..37685 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score267.7
Seed ortholog evalue1.1e-68
Seed eggNOG ortholog2880.D7FQP2
Model size3268
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size1467
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462541.1169658-UTR-Ecto-sp13_S_contig106:33573..352521681462541.1169658-UTR-Ecto-sp13_S_contig106:33573..35252Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig106 33574..35252 -
1681462541.1294408-UTR-Ecto-sp13_S_contig106:36096..361051681462541.1294408-UTR-Ecto-sp13_S_contig106:36096..36105Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig106 36097..36105 -
1681462541.1491845-UTR-Ecto-sp13_S_contig106:37572..376851681462541.1491845-UTR-Ecto-sp13_S_contig106:37572..37685Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig106 37573..37685 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462541.139351-CDS-Ecto-sp13_S_contig106:36105..375721681462541.139351-CDS-Ecto-sp13_S_contig106:36105..37572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig106 36106..37572 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig106.557.1prot_Ecto-sp13_S_contig106.557.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig106 36106..37572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig106.557.1

>prot_Ecto-sp13_S_contig106.557.1 ID=prot_Ecto-sp13_S_contig106.557.1|Name=mRNA_Ecto-sp13_S_contig106.557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=489bp
MPVPREDAKKDRVKILGDAADMIIKLMCDRATSRQWAEWLRAPLEHAAGT
ANQDLVQKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALIRAGDG
EDIEAKALGVTPLHVAVATGKEAAARVMMLAGADVNAADRNDDTPLHLAI
GGGGDARIAKDLLLSGANPKARGFARDCPIHLAARQGRHDLVHALAHKGA
DLDARDAEGMTPISLAVEGDHVSTVKVLLAAGADAKRRTDLSKTALHVAA
KCNKAGAIPALIEAGADIEARMSLGQSPLWYAAWKGSCAAMFVLLQLGAD
AKSNDEIGWTCLHAASHNGHADAADLLLRWGADDMAVDRRGVFTPSALMP
AISQAGDRDRPRLERLAALLEKAPQDRAWRRRGFLVLCRAHPERLRLVEE
IPDMAAGSTGQPRERPSQRARTGKVKVEVELGGRHGQGAGAGAAAGSRDA
RAEGRAGHRRPGVGFGVAAAWLMSVADEGVFRKIVGFL*
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mRNA from alignment at Ecto-sp13_S_contig106:33574..37685-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig106.557.1 ID=mRNA_Ecto-sp13_S_contig106.557.1|Name=mRNA_Ecto-sp13_S_contig106.557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4112bp|location=Sequence derived from alignment at Ecto-sp13_S_contig106:33574..37685- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGTAATATCAACTTGTTGCTTTGTGAACCTTCTCGGCTATCGTGCACGA
GGGCCAGTCGTGTGTTGGTGGTGGTGTTGCCTTCGGTGTTCGCACCCGTT
GATCAGTGTCACCATGCCAGTACCAAGAGAAGACGCAAAAAAGGACCGTG
TCAAAATCCTGGGGGATGCAGCAGACATGATAATCAAACTCATGTGCGAC
AGAGCGACATCGCGACAGTGGGCAGAGTGGCTGAGGGCCCCTCTGGAGCA
TGCAGCAGGAACGGCCAACCAAGACTTGGTGCAGAAGTTGCTGAAAGCTG
GAGCAGACGGGAGTGCGGGCTGGCGGGGTTGTGATGACAAAACGTTGCTG
CATGCGGCTGCCGAGGGCGGAAACGAGGAGGTGGTGACGGCTCTCATCAG
GGCTGGTGATGGAGAAGACATTGAGGCCAAAGCCCTGGGGGTGACTCCAC
TTCATGTTGCAGTTGCAACTGGGAAGGAGGCTGCGGCACGGGTGATGATG
CTTGCTGGGGCCGATGTGAATGCGGCAGACCGTAACGACGACACTCCCCT
TCATCTTGCTATCGGAGGTGGGGGTGATGCACGCATCGCGAAAGACCTCT
TGCTCAGTGGAGCCAATCCCAAAGCCCGAGGTTTCGCGCGTGACTGCCCT
ATCCATCTCGCCGCACGCCAAGGTCGGCATGACCTCGTGCATGCCTTGGC
CCACAAGGGCGCGGATCTGGACGCTCGCGATGCTGAAGGCATGACCCCTA
TCAGTCTTGCGGTGGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTG
GCTGCCGGTGCCGATGCGAAGCGTCGGACGGACCTTTCCAAGACCGCTTT
GCATGTTGCCGCCAAGTGCAACAAAGCAGGCGCCATCCCAGCGCTCATCG
AAGCCGGGGCCGACATTGAAGCTCGAATGTCACTTGGACAATCACCACTT
TGGTACGCGGCCTGGAAGGGCTCTTGCGCGGCCATGTTCGTTCTCCTGCA
ACTGGGTGCCGACGCAAAGAGCAACGACGAAATTGGATGGACTTGCTTGC
ACGCGGCGTCCCATAACGGCCATGCCGACGCCGCGGATCTACTTCTGAGA
TGGGGCGCAGATGATATGGCAGTAGACAGAAGGGGCGTATTCACTCCCAG
CGCGCTCATGCCAGCAATTTCTCAAGCTGGCGACAGAGACCGCCCGAGAC
TCGAACGTCTGGCCGCGCTACTGGAGAAGGCTCCACAGGATAGGGCCTGG
CGTCGCCGGGGCTTCCTAGTGTTGTGCCGCGCCCATCCTGAAAGGCTACG
GCTCGTAGAGGAGATTCCCGATATGGCAGCCGGGTCCACGGGGCAACCCC
GCGAGCGCCCGAGCCAACGTGCCAGGACGGGGAAGGTGAAGGTCGAGGTA
GAGTTGGGTGGCCGACACGGCCAGGGTGCGGGTGCGGGGGCGGCGGCGGG
GAGCCGCGACGCACGCGCCGAAGGTAGGGCTGGACATCGCCGCCCAGGTG
TTGGGTTCGGTGTCGCAGCAGCCTGGCTAATGTCAGTGGCGGACGAGGGA
GTGTTCCGCAAGATCGTGGGATTCCTGTAGTGCGAAGAGGTGAGTCGGTG
TAGTTGTGTTGTTCAGCGCAAGCTGCTGTTTTGCTTTTATTTGATTTGTT
CGAGCAGTATACAGCAGTAGCCAGGGATAGGGGAGAGTCGCGTACCTCTG
AAAATGCTGTCATGAATTTTCGACAACGAGGGGAACAGCTGTAGCGAAAT
ATATGGATCGGTTGAAATCCCACACTTGTTGATTCCACGCCGCAGTGTTG
ATTCCCTCTCGTTCATCACACCTACCTTACCATCCGTTCCTCGCCATTAG
AGATGATTCCGGCGGTGCCTCATGCTGCAGACACGAAACGTTCTTCCTAG
GATTAAGAGTTGTTTTCCGCTCTTCCTTCGTCCTCATCATGGGCTCGTTT
GAGATTCGATCCGTCTCAAATTTTTTCCTCGAGTCCACGCTCAAGACTTC
CCAACACCACCCTTTGTGAAGTACATCGGACGACACACTGTACTGTTTTA
TTAAATACCCTCTGCTTGCGCCGTGGTCCTCCTTGCTTGATTTACGGTTG
TTTTTCGCACGCTTGGCCGAGTATTCGTTCACCTCTGCAGAAGGGTTGCG
ACCTTCGAAAATTGGAAAATTGACCCGCGTGTAGCTTTCCGTGTGGATGC
GTGCAGTAGGTCAGCAGATGCACAATATGTATTCGATGACGTAAGAATGC
CCTCTTATGCGTTTTTTTTACCATCGATTATCCTCGGGCGCAATGTTGGC
GCTAATTCTACGACTGTCTCACTGACACCATTCATTGTGGATGTAACCTT
TGAAACGCTTCGCATCTTTCGAACGTTCGTCGGGGACGAGTCCCCCTATT
TTGAACACAGCAGTGCCTGTTTTTTCATCCCAGGTGAATTGAAATTAAGA
CCTCTCCTTCACTATTGAGTTCGTTAGAGACAAGCGAAAAAGGTCCATGG
CTTCGCAACACAAGAAGGGCGAAGAGGAGGAGGCTAGTAGACCACACGCG
GAAGCTGAGCGGCTAGAGAACTGCCGGATAACATCAAAAGAGGATTTCGG
GAAGGACGGGCGGGGAGAAAGACGGAGTACGGAGACGCGCCCTTCGTAGC
AGCTACTGACATTTCTCGTGTGTTTCTCCCAAATTGGATGTGTGCTGCCT
TAAGTCCTCTCATGCTATCTATAGCTTATTTACCCCTGAAGAATGGCGTT
GGCCTGATGATGGTGTCGAGCCCTCCGGCTTTAGGTATCCGTTGGCCTGC
AGTAGCGTGTCAGGGGCGTCCATGTTGCCTGACCGCCCCCGCCAATCTGG
GCGTAACAGGGGTATTTAACCTGGCAAGTGATAGCTCCGACAGTGAAATC
TTAATCACAGGTGCATGGAGATAGTTTCTTGGATGGTGCGTTCCATCTTG
CAAGTGCGTGGCAATTTGTGGCTAATCGTTGAATGAATGGAGTCGATCCC
CACCGTCAGGACGTGGAACGGTGTTGGGCGGTTGGCGGGTCCAACCGGAG
GGTCGTGAGTGGGAATTGATTTTACCGATTACTTGTTCGGAGTCGGAATC
ATAATGGGAAAAGAAATGAGATATTATTTACCTACCAGGTATTCTGGTTT
AACGTTTACTAGCGTGCGAACGGGGGGATGTTTCTCAGACTTGCGCAGAG
GTCCGTAGTATGGATGTGTTTCAGGCTTTGTGCGTGTTATGTCAAATACC
CTGGCTTGTTTGTGATCGTTGGGGTCGAGGAGTGAAATCTGCGCGTAACG
TTATTGGGGGAATGTACCATTTATCTTCGAGTTTGACATGTCCCCCCGGT
CCATGAGGCCCTGTCTGTAAGGGACTCACACGCTGCGCCGCCATCATATT
ACCGCGGGTTTGCAACAGTTGCATGGATGCAGTCGGCAGCAACTTAAGGT
TTAGGGGGCTGGCTTGTGGTTGATGGTACGGGTGTTCGAGAGATCGAGAT
GAATTGACGATGAATGCATGAGAGATGAGAAAACCGGCACCTGCTTCGTG
CGTTGTCTTTTTTTAATTTAGTTTAATCTCTCCGCTTGCTCAGCAGCGGC
TAGTTTTCTGCCGCTTGCGCGGGTGGGCGCTTGATGGCCATCCATTTGAT
TTTTCGTTTTTTTTAATGCTGCTGTACGCGAAGAAACTTTCTATGCATTG
CAGTGTTGCGGTATCCTGGAAATCAGAAACCCACCCCACAACAGATGGTC
CCGTTTCTTGTTGTATCTTTTTGAGATGATGGTGTGTGAGGTGTAAGGTT
GTTACTCGTGATCCAAGTCGAAATAAGGTGGATTTCGGGTGATGGCGAAC
GGAGTGTAACCAAATGGCCTTGATTGTTTTGCCTCGGGCGGACCCTCCTC
CCCAGCCGGGGAAGGGGGCAACGCGGTCACCTTCACAAAGGCGACAATCT
CCCAACGTCTGTCAAGGATGATTCCCTCTTTTCACACTCACATCTTTTTA
TTTTTGTTGGTTGATGATAAGGAGGAGAGTACACACCAACCACCATTGAC
GTGCATCTCGTTGATTATTTTATTGGGTAAGAAGAAATATTCTTTGTGAC
GTAAGTGTTGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig106:33574..37685-

>mRNA_Ecto-sp13_S_contig106.557.1 ID=mRNA_Ecto-sp13_S_contig106.557.1|Name=mRNA_Ecto-sp13_S_contig106.557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig106:33574..37685- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCAGTACCAAGAGAAGACGCAAAAAAGGACCGTGTCAAAATCCTGGG
GGATGCAGCAGACATGATAATCAAACTCATGTGCGACAGAGCGACATCGC
GACAGTGGGCAGAGTGGCTGAGGGCCCCTCTGGAGCATGCAGCAGGAACG
GCCAACCAAGACTTGGTGCAGAAGTTGCTGAAAGCTGGAGCAGACGGGAG
TGCGGGCTGGCGGGGTTGTGATGACAAAACGTTGCTGCATGCGGCTGCCG
AGGGCGGAAACGAGGAGGTGGTGACGGCTCTCATCAGGGCTGGTGATGGA
GAAGACATTGAGGCCAAAGCCCTGGGGGTGACTCCACTTCATGTTGCAGT
TGCAACTGGGAAGGAGGCTGCGGCACGGGTGATGATGCTTGCTGGGGCCG
ATGTGAATGCGGCAGACCGTAACGACGACACTCCCCTTCATCTTGCTATC
GGAGGTGGGGGTGATGCACGCATCGCGAAAGACCTCTTGCTCAGTGGAGC
CAATCCCAAAGCCCGAGGTTTCGCGCGTGACTGCCCTATCCATCTCGCCG
CACGCCAAGGTCGGCATGACCTCGTGCATGCCTTGGCCCACAAGGGCGCG
GATCTGGACGCTCGCGATGCTGAAGGCATGACCCCTATCAGTCTTGCGGT
GGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTGGCTGCCGGTGCCG
ATGCGAAGCGTCGGACGGACCTTTCCAAGACCGCTTTGCATGTTGCCGCC
AAGTGCAACAAAGCAGGCGCCATCCCAGCGCTCATCGAAGCCGGGGCCGA
CATTGAAGCTCGAATGTCACTTGGACAATCACCACTTTGGTACGCGGCCT
GGAAGGGCTCTTGCGCGGCCATGTTCGTTCTCCTGCAACTGGGTGCCGAC
GCAAAGAGCAACGACGAAATTGGATGGACTTGCTTGCACGCGGCGTCCCA
TAACGGCCATGCCGACGCCGCGGATCTACTTCTGAGATGGGGCGCAGATG
ATATGGCAGTAGACAGAAGGGGCGTATTCACTCCCAGCGCGCTCATGCCA
GCAATTTCTCAAGCTGGCGACAGAGACCGCCCGAGACTCGAACGTCTGGC
CGCGCTACTGGAGAAGGCTCCACAGGATAGGGCCTGGCGTCGCCGGGGCT
TCCTAGTGTTGTGCCGCGCCCATCCTGAAAGGCTACGGCTCGTAGAGGAG
ATTCCCGATATGGCAGCCGGGTCCACGGGGCAACCCCGCGAGCGCCCGAG
CCAACGTGCCAGGACGGGGAAGGTGAAGGTCGAGGTAGAGTTGGGTGGCC
GACACGGCCAGGGTGCGGGTGCGGGGGCGGCGGCGGGGAGCCGCGACGCA
CGCGCCGAAGGTAGGGCTGGACATCGCCGCCCAGGTGTTGGGTTCGGTGT
CGCAGCAGCCTGGCTAATGTCAGTGGCGGACGAGGGAGTGTTCCGCAAGA
TCGTGGGATTCCTGTAG
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