mRNA_Ecto-sp13_S_contig10591.549.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10591.549.1
Unique NamemRNA_Ecto-sp13_S_contig10591.549.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: D7FTL9_ECTSI (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL9_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 1.430e-211
Identity = 303/306 (99.02%), Postives = 305/306 (99.67%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSATAG 918
            LEGAKDWAVSRNRFWGTPMPMWVS+D EEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGA+SATAG
Sbjct:  470 LEGAKDWAVSRNRFWGTPMPMWVSEDGEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGAESATAG 775
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: F0ZSZ2_DICPU (Isoleucine--tRNA ligase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZSZ2_DICPU)

HSP 1 Score: 472 bits (1214), Expect = 6.800e-156
Identity = 222/299 (74.25%), Postives = 254/299 (84.95%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEG 897
            L  A DWAVSRNR+WGTP+P+WVS+D +E+VA+GSI EL ELSGV VTDLHRES+DHITIPSKQGKG L+R+E+VFDCWFESGSMPYAQ HYPFENKDKFEK FPA FIAEGLDQTRGWFYTL VL  ALFDKP F+NLIVNGLVLASDGKKMSKRLKNYPDPM+V+  +GAD+LRLYLINSPVV+AE LKF+E+GVQ  +++V LPWFNA+RFFVQ A R E +   +FVP+   A KS NVMD W+ A+ Q L++FV  EM AYRLYTVVP+LV FIE LTNWYVRLNR R KG+ G
Sbjct:  453 LSNATDWAVSRNRYWGTPIPLWVSEDGQEVVAIGSIEELFELSGVRVTDLHRESIDHITIPSKQGKGTLRRIEDVFDCWFESGSMPYAQQHYPFENKDKFEKIFPAHFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLASDGKKMSKRLKNYPDPMEVVSKYGADSLRLYLINSPVVKAEPLKFQEKGVQDMIKDVFLPWFNAYRFFVQNALRFEKSQNTKFVPDINVALKSENVMDKWVLASCQSLIKFVRVEMAAYRLYTVVPKLVRFIEDLTNWYVRLNRKRFKGSNG 751
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: D3BUX1_POLPP (Isoleucine--tRNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BUX1_POLPP)

HSP 1 Score: 470 bits (1209), Expect = 1.550e-154
Identity = 223/303 (73.60%), Postives = 252/303 (83.17%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSA 909
            LE A DWAVSRNR+WGTP+P+WVS+D EE+VAVGS+ EL ELSGV +TDLHRES+DHITIPSKQGKG LKR+EEVFDCWFESGSMPYAQ HYPFENKD FE  FPA FIAEG+DQTRGWFYTL VL  ALFDKP F+NLI NGLVLA+DGKKMSKRLKNYPDPM+VI  +G+DALRLYLI SPVVR E+LKF+E+GV   +++V LPWFNA+RF VQ A R E   G  FVP+   A  STN+MD WI A+ Q L++FV  EM AYRLYTVVPRL +FIEQLTNWYVRLNR R KGA+G D A
Sbjct:  515 LEAATDWAVSRNRYWGTPIPLWVSEDGEEVVAVGSVEELYELSGVRITDLHRESIDHITIPSKQGKGQLKRIEEVFDCWFESGSMPYAQQHYPFENKDHFESIFPAQFIAEGIDQTRGWFYTLLVLSTALFDKPPFQNLIANGLVLAADGKKMSKRLKNYPDPMEVIGKNGSDALRLYLITSPVVRGETLKFQEKGVADVLKDVFLPWFNAYRFMVQNALRHEKVAGKSFVPDINNALASTNIMDRWILASCQSLIKFVREEMAAYRLYTVVPRLTKFIEQLTNWYVRLNRKRFKGAQGEDDA 817
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: W2Q337_PHYPN (Isoleucine--tRNA ligase n=29 Tax=Peronosporaceae TaxID=4777 RepID=W2Q337_PHYPN)

HSP 1 Score: 471 bits (1211), Expect = 2.310e-154
Identity = 224/303 (73.93%), Postives = 253/303 (83.50%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSA 909
            L   KDW +SR RFWGTP+P+WVSDD EE+V VGSIAEL+EL+G +VTDLHRE +DH+TIPSKQGKG L+RV EVFDCWFESGSMPYAQ HYPFENKDKFE NFPADF+AEGLDQTRGWFYTL VL  ALFDKPAFKNLIVNGLVLA DG+KMSK LKN+ DP +++  +GADALRLYLINSPVVRAE LKF+  GV   +RE+ LPWFN+ RFF QQA RL++  G  FVPN EAA  STNVMD+WI A +  L++FVH EMKAYRLYTVVPRLV FI QLTNWYVRLNR RLKG+ G+  A
Sbjct:  459 LVDGKDWNISRGRFWGTPLPLWVSDDYEEVVCVGSIAELEELAGEKVTDLHREFIDHLTIPSKQGKGVLRRVPEVFDCWFESGSMPYAQQHYPFENKDKFEANFPADFVAEGLDQTRGWFYTLMVLSTALFDKPAFKNLIVNGLVLAEDGRKMSKSLKNFTDPEEILQKYGADALRLYLINSPVVRAEPLKFQAPGVLGVIREIFLPWFNSARFFAQQATRLQLETGVAFVPNREAALASTNVMDSWIIAAMHNLIKFVHEEMKAYRLYTVVPRLVSFIGQLTNWYVRLNRPRLKGSAGSAEA 761
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: A0A7S3GN89_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN89_9STRA)

HSP 1 Score: 462 bits (1189), Expect = 3.300e-153
Identity = 221/306 (72.22%), Postives = 250/306 (81.70%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSATAG 918
            L  AKDWA+SRNRFWGTP+P+W+SDD EE+V +GS+ EL +LSGV VTDLH+E VDHITIPSKQGKG LKRV+EVFDCWFESGSMPYAQ+HYPFENK++F   FPADFIAEGLDQTRGWFYTL V+   LFDKPAFKNLIVNGLVLA+DGKKMSKRLKNYP P  V++  GADALRLYLINSPVVRA+ LKF++EGV   VR VLLPWFN FRFF Q   R E   G +FVPN E +  STN +D WI A   GLV+FVH EMKAYRLYTVVPRLV+FI+QLT WY+RLNR R+KG    + A  G
Sbjct:  472 LADAKDWAISRNRFWGTPIPLWISDDLEEIVTIGSVEELYQLSGVRVTDLHKEHVDHITIPSKQGKGLLKRVDEVFDCWFESGSMPYAQMHYPFENKERFTNGFPADFIAEGLDQTRGWFYTLMVISTCLFDKPAFKNLIVNGLVLAADGKKMSKRLKNYPAPEIVVNECGADALRLYLINSPVVRADVLKFQQEGVVEVVRGVLLPWFNTFRFFTQCVDRWESISGTKFVPNVEVSKGSTNDVDVWILAATVGLVEFVHQEMKAYRLYTVVPRLVDFIDQLTKWYIRLNRFRIKGESSQEEALVG 777
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: UPI0006448958 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448958)

HSP 1 Score: 465 bits (1196), Expect = 3.320e-153
Identity = 217/303 (71.62%), Postives = 254/303 (83.83%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSA 909
            L+ A DWAVSRNR+WGTP+P+WVS+D EE+VA+GSI EL ELSGV VTDLHRES+DHITIPSKQGKG LKR+EEVFDCWFESGSMPYAQ HYPFENKD+FE+ FPA FIAEG+DQTRGWFYTL VL  ALFDKP F+NLI NG+VLA+DGKKMSKRLKNYPDPM +I+ +G+DALRLYLI+SPVVR ++LKF+E+GV   +++V LPW+NA+RF VQ A R E   G  FVP+   A  STN+MD WI A+ Q L+ FV  EM AYRLYTVVPRL +FIE+LTNWYVRLNR R KGA+G + A
Sbjct:  455 LKSATDWAVSRNRYWGTPIPLWVSEDGEEVVAIGSIDELAELSGVRVTDLHRESIDHITIPSKQGKGTLKRIEEVFDCWFESGSMPYAQQHYPFENKDRFERIFPAQFIAEGIDQTRGWFYTLLVLSTALFDKPPFQNLIANGMVLAADGKKMSKRLKNYPDPMDIIEKYGSDALRLYLISSPVVRGDTLKFQEKGVSDILKDVFLPWYNAYRFMVQNAMRHEKVAGKPFVPDINNALASTNIMDRWILASCQSLIMFVREEMAAYRLYTVVPRLTKFIEELTNWYVRLNRKRFKGAQGEEDA 757
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: F4Q549_CAVFA (Isoleucine--tRNA ligase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q549_CAVFA)

HSP 1 Score: 464 bits (1194), Expect = 9.540e-153
Identity = 219/303 (72.28%), Postives = 251/303 (82.84%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGADSA 909
            L+ A DWAVSRNR+WGTP+P+W+S+D +EMV +GSI EL ELSGV VTDLHRES+DHITIPSK+G   L+R+EEVFDCWFESGSMPYAQ HYPFENKD+FEK FPA FIAEG+DQTRGWFYTL VL  ALFDKP F+NLIVNGLVLASDGKKMSKRLKNYPDP+ VID  G+DALRLYLI+SPVVRAE+LKF+E GV+  +++V LPWFNA+RF VQ A R E   G +FVP  E A  STN+MD W+ A+ Q L++FV  EM AYRLYTVVPRL  FI +LTNWYVRLNR R KGA G D A
Sbjct:  471 LKNASDWAVSRNRYWGTPIPIWISEDGQEMVVIGSIEELFELSGVRVTDLHRESIDHITIPSKKGGAPLRRIEEVFDCWFESGSMPYAQQHYPFENKDRFEKIFPAHFIAEGIDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLASDGKKMSKRLKNYPDPVTVIDKFGSDALRLYLISSPVVRAETLKFQENGVKDMLKDVFLPWFNAYRFMVQNAHRHEAATGSKFVPTLEVALASTNIMDRWVLASCQSLIKFVREEMAAYRLYTVVPRLTLFINELTNWYVRLNRRRFKGANGEDDA 773
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: UPI0009A2E211 (isoleucine--tRNA ligase, cytoplasmic-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2E211)

HSP 1 Score: 449 bits (1154), Expect = 1.030e-152
Identity = 210/301 (69.77%), Postives = 252/301 (83.72%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGAD 903
            L+ A+DWA+SRNR+WGTP+P+WVS+D EE+V VGS+AEL+ELSG++V DLHRESVD+ITIPS  GKG LKRV EVFDCWFESGSMPYAQ+HYPFENK +FE  FPADFIAEG+DQTRGWFYTL VL  ALF KP F+N+IVNGLVLASDG+KMSKR KNYPDPM V++S+GADALRLYLINSPVVRAE+L+FKEEGV+  +++V LPW+NA+RF VQ  +RL    G +F+ N      S N+MD WI +  Q L+QF   EM+AYRLYTVVPRLV+F++ LTNWYVR+NR RLKG  GA+
Sbjct:  200 LKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSVAELEELSGIQVEDLHRESVDNITIPSNCGKGVLKRVSEVFDCWFESGSMPYAQVHYPFENKREFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFRNVIVNGLVLASDGQKMSKRKKNYPDPMHVVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQRLHKEEGIQFLFNESTIEDSDNIMDKWILSFTQSLIQFFKAEMEAYRLYTVVPRLVKFVDLLTNWYVRMNRKRLKGESGAE 500
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: A0A7S4NT32_9EUKA (Isoleucine--tRNA ligase n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NT32_9EUKA)

HSP 1 Score: 463 bits (1192), Expect = 1.370e-152
Identity = 218/301 (72.43%), Postives = 258/301 (85.71%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGAD 903
            L+GA DWAVSRNRFWGTP+P+WVS+D  E+V VGS++EL+ELSGV V DLHRESVDHITIPSK+G G L+RVEEVFDCWFESGSMPYAQ+HYPFENK+KF+ +FPADFIAEG+DQTRGWFYTL VL  ALFDKPAFKNLIVNGLVLA+DGKKMSKRLKNYPDP+ VID +G+DALRLYLINSPVV A+ L+F+EEGV A +++VLLPWF+A+RF V+ +  L+     +FVPN +   KS NVMD WI A+LQ LV+FV  EMKAYRLYTV+P+LV F+E LTNWY+R NR R+KGA G +
Sbjct:  379 LKGAVDWAVSRNRFWGTPLPLWVSEDFTEVVCVGSVSELEELSGVRVKDLHRESVDHITIPSKKGNGVLRRVEEVFDCWFESGSMPYAQVHYPFENKEKFQNSFPADFIAEGVDQTRGWFYTLMVLSTALFDKPAFKNLIVNGLVLAADGKKMSKRLKNYPDPVGVIDKYGSDALRLYLINSPVVHADDLRFREEGVSAVLKDVLLPWFHAYRFCVETSLSLK-----KFVPNLDIVLKSNNVMDRWIMASLQNLVKFVRDEMKAYRLYTVIPKLVSFVEDLTNWYLRSNRGRMKGAAGEE 674
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Match: A0A8J4V764_9MYCE (Isoleucine--tRNA ligase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V764_9MYCE)

HSP 1 Score: 462 bits (1190), Expect = 2.530e-152
Identity = 217/299 (72.58%), Postives = 250/299 (83.61%), Query Frame = 1 
Query:    1 LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDLHRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEG 897
            L+ A DWAVSRNR+WGTP+P+W+S+D EE+V V S+ EL++LSGV V DLHRES+DHITIPS +GKG L+R+E+VFDCWFESGSMPYAQ HYPFENKDKFEK FPA FIAEGLDQTRGWFYTL VL  ALFDKP F+NLIVNGLVLASDGKKMSKRLKNYPDPM+V+  +GADALRLYLINSPVV+AE LKF E+GVQ  +++V LPWFNA+RFFVQ A R E      FVP  E A  S N+MD WI A+ Q L++FV  EM AYRLYTV+P+LV+FIE+LTNWYVRLNR R KGA G
Sbjct:  451 LKNATDWAVSRNRYWGTPIPLWISEDGEEVVVVSSVDELEKLSGVRVNDLHRESIDHITIPSSKGKGTLRRIEDVFDCWFESGSMPYAQQHYPFENKDKFEKIFPAHFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLASDGKKMSKRLKNYPDPMEVVGKYGADALRLYLINSPVVKAEPLKFNEKGVQDIIKDVFLPWFNAYRFFVQNALRFEKANNSTFVPEIEKAFSSDNIMDKWIMASCQSLIKFVREEMAAYRLYTVLPKLVKFIEELTNWYVRLNRRRFKGATG 749
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10591.549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL9_ECTSI1.430e-21199.02Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
F0ZSZ2_DICPU6.800e-15674.25Isoleucine--tRNA ligase n=1 Tax=Dictyostelium purp... [more]
D3BUX1_POLPP1.550e-15473.60Isoleucine--tRNA ligase n=1 Tax=Polysphondylium pa... [more]
W2Q337_PHYPN2.310e-15473.93Isoleucine--tRNA ligase n=29 Tax=Peronosporaceae T... [more]
A0A7S3GN89_9STRA3.300e-15372.22Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumell... [more]
UPI00064489583.320e-15371.62hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4Q549_CAVFA9.540e-15372.28Isoleucine--tRNA ligase n=1 Tax=Cavenderia fascicu... [more]
UPI0009A2E2111.030e-15269.77isoleucine--tRNA ligase, cytoplasmic-like n=1 Tax=... [more]
A0A7S4NT32_9EUKA1.370e-15272.43Isoleucine--tRNA ligase n=1 Tax=Paramoeba aestuari... [more]
A0A8J4V764_9MYCE2.530e-15272.58Isoleucine--tRNA ligase n=1 Tax=Polysphondylium vi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10591contigEcto-sp13_S_contig10591:956..3980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score619.4
Seed ortholog evalue9.1e-175
Seed eggNOG ortholog2880.D7FTL9
Preferred nameILERS
Model size924
KEGG rclassRC00055,RC00523
KEGG koko:K01870
KEGG ReactionR03656
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0019899,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046686,GO:0050896,GO:0051020,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.Belongs to the class-I aminoacyl-tRNA synthetase family
EggNOG OGsCOG0060@1,KOG0434@2759
EC6.1.1.5
Cds size924
COG Functional cat.J
BiGG ReactioniRC1080.CRv4_Au5_s16_g6096_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10591.549.1prot_Ecto-sp13_S_contig10591.549.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10591 956..3980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462540.378269-CDS-Ecto-sp13_S_contig10591:955..10931681462540.378269-CDS-Ecto-sp13_S_contig10591:955..1093Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 956..1093 +
1681462540.3886786-CDS-Ecto-sp13_S_contig10591:1538..16221681462540.3886786-CDS-Ecto-sp13_S_contig10591:1538..1622Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 1539..1622 +
1681462540.3966339-CDS-Ecto-sp13_S_contig10591:1850..19731681462540.3966339-CDS-Ecto-sp13_S_contig10591:1850..1973Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 1851..1973 +
1681462540.404725-CDS-Ecto-sp13_S_contig10591:2303..24421681462540.404725-CDS-Ecto-sp13_S_contig10591:2303..2442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 2304..2442 +
1681462540.4129043-CDS-Ecto-sp13_S_contig10591:2898..30681681462540.4129043-CDS-Ecto-sp13_S_contig10591:2898..3068Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 2899..3068 +
1681462540.4207048-CDS-Ecto-sp13_S_contig10591:3399..35161681462540.4207048-CDS-Ecto-sp13_S_contig10591:3399..3516Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 3400..3516 +
1681462540.4311044-CDS-Ecto-sp13_S_contig10591:3827..39801681462540.4311044-CDS-Ecto-sp13_S_contig10591:3827..3980Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10591 3828..3980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10591.549.1

>prot_Ecto-sp13_S_contig10591.549.1 ID=prot_Ecto-sp13_S_contig10591.549.1|Name=mRNA_Ecto-sp13_S_contig10591.549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp
LEGAKDWAVSRNRFWGTPMPMWVSDDCEEMVAVGSIAELKELSGVEVTDL
HRESVDHITIPSKQGKGDLKRVEEVFDCWFESGSMPYAQLHYPFENKDKF
EKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLVLASDG
KKMSKRLKNYPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQAT
VREVLLPWFNAFRFFVQQARRLEMTCGDRFVPNPEAAAKSTNVMDNWIQA
TLQGLVQFVHTEMKAYRLYTVVPRLVEFIEQLTNWYVRLNRNRLKGAEGA
DSATAGER
back to top

mRNA from alignment at Ecto-sp13_S_contig10591:956..3980+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10591.549.1 ID=mRNA_Ecto-sp13_S_contig10591.549.1|Name=mRNA_Ecto-sp13_S_contig10591.549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10591:956..3980+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGAAGGTGCGAAGGACTGGGCGGTGTCGCGGAATCGCTTCTGGGGGAC
CCCGATGCCCATGTGGGTCAGCGACGATTGCGAGGAGATGGTGGCGGTAG
GCTCCATCGCCGAGCTCAAGGAGCTCTCCGGGGTGGAGGTGGGTCAGGTT
GAGTGGCATCATATTCACCGTGTCCGTAGATCTATCTCCGTCCTTGCCAC
ACGAGAGAATTCGCGCGGGGGGGGGTGGGGCGGGCTTCCTCATGTGTTGC
ATGCCGTGGTTTAAGTGGGGGGCTCGGGAAGGTACTCGTGTTCGGCATGC
CTTAGCTGTTGGGCCTGATGATTATGCGTCATCGAGAAGGAGGAGAGCGG
GCAGTCTTCTGGCGTTCCCATGGGGTCGTAAGACCCGTTGAAGGGGTGTT
TTGCCCTTCCTCGTTATGGTCGCGACGGGCTTCGGCCAGCCAAGTCACGC
TGGTGTTGTACCAGCCCCCCCCCGTATGTGACATCGCCCTGCTCTCTCGT
TCTCACATCAACGTCTCTCCCCCCGGCTGATCATTGTTTGGCGCGTGCAC
GCACTTGTATCCGTATTGGGGCGACAAACGCAGGTGACTGACCTCCACAG
AGAATCGGTGGATCACATCACGATCCCGTCCAAGCAGGGCAAGGGCGACC
TCAAGCGAGTCGAAGAGGTGAGTGACGGGTGCTGCATTCGGAAAAGCTCT
TACCTGTGTTGTCAGTGATGTGACGTGCTTGCCTACACCCTCTTTGCGTT
TTCCCGACTTGTTCTATCGAACAGTTCACGTCGCGATATTGGGCCAAAAT
ACTGAAAAAATTAGATGTATCCCATCTCAAGAAAAACACCCCGGCCCATG
TTAACCTCTCCTCGTCTCATCGATTCTGTTGCTGCGATATTCCAGGTGTT
CGACTGCTGGTTCGAGTCGGGGTCGATGCCGTACGCTCAGCTACACTACC
CTTTCGAAAACAAGGACAAGTTCGAAAAAAACTTCCCCGCAGACTTTATC
GCCGAGGGGCTTGATCAGGTGTGTGAGCTCACCCTCTCGGGGTGGTACGT
ATGTAGCGTTTGCCCACGGCAAGTGGCATGACTTTATGGGTGCTGTGATC
CGTTGTTGTGCACGGGATTTCGGAACCACTCTGATTGTTGCTTCCTGTGC
ATGTCATGACTGGAAGATTGTTTTCTGCCTCTGATGAAGAAGAGCCAAGA
AGAGCCAATACCAGGACTTGGGTCGGCATCGGCCACTACTTCAAAGTTGG
AGGCGTCCCTCTGTTTCCCGATACATATCCTGGCTTTGTGCCTCGTTTTG
TTTTTCACGCCCCCTCTTCGTGCGTCACGCCTATTTTTGCTTAACCAGAC
GCGCGGTTGGTTCTACACCCTGACGGTGCTTGGCGCGGCCCTCTTCGACA
AGCCGGCCTTCAAGAACCTGATCGTGAACGGCCTGGTGTTAGCCTCCGAC
GGGAAGAAGATGAGCAAACGCCTCAAGAACTACCCCGGTGAGCAAAGCCC
TCGAGAAATCGCCTCGGCGATATATCGCCTCCAGTAGTACCCAGGTTAAG
CGAAAACTCGTGACAGAGGGGGCTACGTGCGCCGTCATCATGGACGCCTT
GAGCTTTTCTTCGGAGAAGTCAAACTTCGGAGACAAGGGGAAGGTGTGAT
GATCATGGTCTAACCTTTTGTGGGGGGCAAGGTGCGCTTGGGTAGGTGAC
GCTCGACGAACATGGGGTTGCACTCTTGACGCTGACAGAGTTCTCATGGT
AATTCCACGAGAAAACGGCATGCGTTACACAAGTCTCACAACATCACCCC
ACTGCTTGCCAACATCTCCTCCCCCACGATGGCCTCCACGAAAGCCCCTC
TCGCAAGTCTCTTCTTACATGACCCCACTACTTGCCAACGTCCCCCCTCC
TCGCGATTGCCATTCACGGAACCCCCCTTCTCGTTTGCGGTAGACCCGAT
GAAGGTGATCGACTCCCACGGCGCGGACGCCCTCCGTCTGTACCTCATCA
ACTCCCCTGTTGTAAGGGCGGAGTCCCTCAAGTTCAAGGAGGAGGGGGTC
CAGGCGACCGTTCGGGAGGTGCTGCTGCCGTGGTTCAACGCCTTCCGGTT
TTTCGTACAGCAGGTACATCACCCCGTATCACTACACTAATACACTGTAC
AAGGTATACTATTTTGCAGTAGGTGAAACAAGAACGAAGATGGGTTCAAG
TGCGATCTACTGGAGGTGGCATTCGTTTTGGTCTCTCGGACAAGCTGTGC
GTGCCATTTGGGGGTTCCCTCCCGGTTACCGCGGGACGTGATGTTTCCAT
TCCACAACCTGGGTGATGGTTGAAAGAATACGTTGCGCTTGTCACATCTC
TGTATGGTCAGGAGAATGAGTCGCGTTTCTCACCTCGTGTTGGTGTCGTT
GCGCGTCGGCTCCAACGTCGCATTCTTCCTTTTGAGTTTTGCAGGCCCGT
CGGCTGGAGATGACGTGCGGCGATCGGTTTGTGCCGAACCCCGAGGCGGC
CGCGAAGTCGACCAACGTGATGGACAACTGGATCCAAGCCACACTTCAGG
GTCTGGTACAGGTACGTACTGTAGCCAGACGTGTCTTGTTGAGGTTCGTC
ACGGCCGTCTTGTTTGTGGCGGCGTGACACGAAATCTGTTATTCACACAC
TGGACACCGGGAGGGAGTTGTGTTTTGAAACTGTGCTCTCTCCCGCGCGT
CTCTTTATTGATTGAGCGCCTTGACATTCGCAGACTGGTGGGGGAAGAAG
AAGGCGTGTTTCGAAACCTGTCGGTTGCGTTTTTTTTGCGCCTGTTACTG
GTGGCTTTCAGCCATGTTGCTCAATTTCCTCCATATCCTCGGTCGTTTTT
TTATTATTTTCCCTTGACTAAGTTTGTTCACACAGAAATGAAGGCGTACC
GACTGTACACGGTCGTCCCTCGACTGGTTGAGTTCATCGAGCAGCTTACG
AACTGGTACGTCCGCCTCAACCGGAACCGCCTCAAGGGCGCGGAGGGGGC
TGACAGCGCCACGGCAGGTGAGAGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10591:956..3980+

>mRNA_Ecto-sp13_S_contig10591.549.1 ID=mRNA_Ecto-sp13_S_contig10591.549.1|Name=mRNA_Ecto-sp13_S_contig10591.549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10591:956..3980+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGAAGGTGCGAAGGACTGGGCGGTGTCGCGGAATCGCTTCTGGGGGAC
CCCGATGCCCATGTGGGTCAGCGACGATTGCGAGGAGATGGTGGCGGTAG
GCTCCATCGCCGAGCTCAAGGAGCTCTCCGGGGTGGAGGTGACTGACCTC
CACAGAGAATCGGTGGATCACATCACGATCCCGTCCAAGCAGGGCAAGGG
CGACCTCAAGCGAGTCGAAGAGGTGTTCGACTGCTGGTTCGAGTCGGGGT
CGATGCCGTACGCTCAGCTACACTACCCTTTCGAAAACAAGGACAAGTTC
GAAAAAAACTTCCCCGCAGACTTTATCGCCGAGGGGCTTGATCAGACGCG
CGGTTGGTTCTACACCCTGACGGTGCTTGGCGCGGCCCTCTTCGACAAGC
CGGCCTTCAAGAACCTGATCGTGAACGGCCTGGTGTTAGCCTCCGACGGG
AAGAAGATGAGCAAACGCCTCAAGAACTACCCCGACCCGATGAAGGTGAT
CGACTCCCACGGCGCGGACGCCCTCCGTCTGTACCTCATCAACTCCCCTG
TTGTAAGGGCGGAGTCCCTCAAGTTCAAGGAGGAGGGGGTCCAGGCGACC
GTTCGGGAGGTGCTGCTGCCGTGGTTCAACGCCTTCCGGTTTTTCGTACA
GCAGGCCCGTCGGCTGGAGATGACGTGCGGCGATCGGTTTGTGCCGAACC
CCGAGGCGGCCGCGAAGTCGACCAACGTGATGGACAACTGGATCCAAGCC
ACACTTCAGGGTCTGGTACAGTTTGTTCACACAGAAATGAAGGCGTACCG
ACTGTACACGGTCGTCCCTCGACTGGTTGAGTTCATCGAGCAGCTTACGA
ACTGGTACGTCCGCCTCAACCGGAACCGCCTCAAGGGCGCGGAGGGGGCT
GACAGCGCCACGGCAGGTGAGAGG
back to top