mRNA_Ecto-sp13_S_contig10585.545.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: D7FMB3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB3_ECTSI) HSP 1 Score: 775 bits (2002), Expect = 9.060e-281 Identity = 407/459 (88.67%), Postives = 415/459 (90.41%), Query Frame = 1
Query: 1 IVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQIGVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAGAAQXXXXGDDRDHPRVGSDDARFPTGFPPKPPFSAGNFRGEAQSVEQNQPPLTRGVLPSPAGLSPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAALQGAIEESEARFKAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTAVGGKAN 1377
+VKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQ+GVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGA XXXX HP VGSDDARFP GFPPKPPFSAGNFRGE Q VEQNQPPL RGV LSPVEE+LVRRMREAFLGYQSYYARERAAHAAEVSDLT QLSA RREETTP QGQA+TR RRAAALQGAI+ESEARF AGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIY KVRA+YAASGDEVRGFGST+RLYLQPLSATRRAGT AAVA +GQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL AVGGKAN
Sbjct: 1 MVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQVGVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAXXXXXXXXXXXXXHPHVGSDDARFPIGFPPKPPFSAGNFRGETQPVEQNQPPLPRGVXXXXXXLSPVEEVLVRRMREAFLGYQSYYARERAAHAAEVSDLTAQLSAVRREETTPCQGQAETRARRAAALQGAIQESEARFNAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIYGKVRAHYAASGDEVRGFGSTTRLYLQPLSATRRAGTGXXXXXXXXXXXXXXXAAVAAEGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLAAVGGKAN 459
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A1S3KHH0_LINUN (E3 ubiquitin-protein ligase TRIM39 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KHH0_LINUN) HSP 1 Score: 89.4 bits (220), Expect = 1.320e-15 Identity = 81/319 (25.39%), Postives = 139/319 (43.57%), Query Frame = 1
Query: 424 SPAGLSPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAA-----LQGAIEESEARFKAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLY-LQPLS--ATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL 1353
SP+ SPVE +L ++++ + ++ YY + H +++ L R E QG A Q EE + + + +D + +P ++LP ++L + + V D L P+ + + ++++ A GD++ FG + + P S + +V + AGG + V L D T+ + + +VV G V KS+ K CF+V F + +VDYFSC C +NW+C C CH ++ P+++NH P WACCYC KK+ +C+L
Sbjct: 108 SPSSFSPVENVLKSHVKKSLVAHERYYQELKREHKQKLAQLDADHQ--RLIEEAKMQGLTDDELEHQIADLSQNYQRHQEELDQELSECSQMVATAYDRYLTEHIPDLTVLPIKISLCILCKNVTVKDVMLKPSDSLKEVTDYLKSHMEAEGDDIIAFGENVKYFCFGPFSKYSIDEMTQKVQSIEAGG----------ISLPDVTLLEDDTRLILRYG----LKPKSTIVVYGSVHCKSDLPKQCFSVNFEANKVY-----KVDYFSCKECGINWVCRPCMEVCHKD-HELVPYIMNHQPTWACCYCPKKK---KCQL 401
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI0003F0E4CC (tripartite motif-containing protein 12A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0E4CC) HSP 1 Score: 86.7 bits (213), Expect = 9.380e-15 Identity = 85/321 (26.48%), Postives = 140/321 (43.61%), Query Frame = 1
Query: 439 SPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAALQGAIEESEAR---FKAGME----ALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYL------QPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTA 1359
SPVEE+L + ++E +++YY R ++ + +L+ + T Q Q Q + L+ E+ E R F + +E L + +D + LP PSLLP V+L++ ++ + F D Q+ P + +I +++ + D + F R L + LS T + V V T + P + F G + ++ G V +S+ K CFA F + + VDYF+C C NW+C C CH V P+++NH P WACCYC KK+ +C L++
Sbjct: 114 SPVEEVLKKHLKEGLAAHENYYQELRTQCNHQIQMIEKELAGS----TAELQKQTQVQTDFEVKLKDLNEKYEYRKQTFLSELENCGRMLSQAYDRYLTEHLPTPSLLPIKVSLVLLNKEITFSDVQIKPNYSISHIQDILKSKMHSRDDPIITFDDDVRFILVGPFVKRSLSETHQLVNDV-----------VQHEVVHTDVVLLPRNCCPILQFGAKSGSEI------IITGRVKSQSDLPKLCFATTFEEGRG-----DSVDYFTCRDCGFNWVCKPCKESCHKDHMTV-PYIMNHHPTWACCYCPKKK---KCVLSS 404
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI001E1E2230 (E3 ubiquitin-protein ligase trul-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E2230) HSP 1 Score: 85.9 bits (211), Expect = 1.710e-14 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTAVG 1365
G +++ G V L+S+ K CF F + QRVDYFSC C W+C SC CH G DV P+++ H PNWACCYC KK+ C++ G
Sbjct: 318 GSVILIYGTVKLESDLPKKCFVEVFKKGDTS----QRVDYFSCNNCSFKWICRSCMEICHSG-HDVVPYIMQHQPNWACCYCPKKK---VCRIQTTG 406
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI001B88E558 (uncharacterized protein LOC121385151 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E558) HSP 1 Score: 82.4 bits (202), Expect = 2.640e-13 Identity = 61/218 (27.98%), Postives = 92/218 (42.20%), Query Frame = 1
Query: 697 FDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQ-PLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHP--LSDATQTVFSQSPGGRVGA--GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
+D + + +P +LP +V++++ + +R D P I V GD V + + R+ L PLS + A G + P D Q + P + G G +V+ + +S+ K CF ++ Q VDYFSC C NW+C SC CH G D KP+++NH P WACCYC KK+
Sbjct: 202 YDRYLQSHIPSLEILPVSVSVLIVEKNIRIPDLIFQPVDCLNVIQGAVERTLQERGDPVLRWDYSGRIILVGPLSRCNQ-----------------TELAAVLSGPIDPDMYPDVHQVTWQTKPIIQFGMKPGTEIVLIQCLKCESDMPKVCFVEQYKTQ-----GSHPVDYFSCTQCGFNWICRSCIQICHQG-HDTKPYVMNHKPTWACCYCPKKK 396
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A8J1TZF6_OWEFU (Ofus.G07337 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TZF6_OWEFU) HSP 1 Score: 79.0 bits (193), Expect = 3.530e-12 Identity = 64/226 (28.32%), Postives = 97/226 (42.92%), Query Frame = 1
Query: 697 FDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWAL------VVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL 1353
+D + + +P ++LP V+L + S+G+ D QL P H E+I ++ GD + +RL + G A S V G +P + PG R +AL + G + +S+ K CFA F + Q+VDYFSC CK+NW+C C CH P ++ H P WACCYC KK+ +C++
Sbjct: 215 YDKYLSEHIPDLAVLPVKVSLSLLSKGITLPDVQLQPFHSVEDIIKMFKSKMVDRGDRIVHIPEDARLIS--FGPFMKKGIFEMEQA---------SREVVNHGAHNP------DILILPPGSRPLLQFALKPSSVIALYGKIQCESDLPKQCFATTFQKDAG-----QKVDYFSCKDCKINWVCRPCMEVCHKE-HSATPHIMGHQPTWACCYCPKKK---KCRM 414
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A2C9L016_BIOGL (RING-type domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L016_BIOGL) HSP 1 Score: 77.4 bits (189), Expect = 8.930e-12 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 1009 VHPLSDATQTVFSQSP--GGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
+H L D ++ P ++ G +V+ +S+ K CF F + Q VDYFSC C + W+C SC CH G V PF++NH PNWACCYC K++
Sbjct: 270 LHNLDDVHSLLWDTRPILQYKMRPGSEIVLQDVFKSQSDIPKRCFVNVFDENTT-----QTVDYFSCNKCSVKWICKSCIQCCHAG-HSVTPFVMNHRPNWACCYCPKRK 373
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI000B45B3A0 (E3 ubiquitin-protein ligase TRIM62-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45B3A0) HSP 1 Score: 77.4 bits (189), Expect = 1.040e-11 Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKL 1341
G + + G ++L+S+ K CF QQ Q VDYF C C W+C SC CH G + P+++NH P WACCYC KK++ L
Sbjct: 315 GSEIAIYGKIILESDMPKKCF-----QQVFEEGNPQSVDYFCCKQCAFQWICRSCMEVCHQG-HETVPYIMNHQPAWACCYCPKKKTCL 397
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI0014589143 (uncharacterized protein LOC117334549 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589143) HSP 1 Score: 76.3 bits (186), Expect = 2.480e-11 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKL 1341
G + + G ++L+S+ K CF +Q Q VDYF C C W+C SC CH G ++ P+++NH P WACCYC KK++ L
Sbjct: 315 GSEIAIYGKIVLESDMPKKCF-----RQVFQDGNPQSVDYFCCKRCGFQWICRSCMEVCHQG-HEIVPYIMNHQPAWACCYCPKKKTCL 397
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A8B8DVN7_CRAVI (uncharacterized protein LOC111129789 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DVN7_CRAVI) HSP 1 Score: 74.7 bits (182), Expect = 5.560e-11 Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 1084 LVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
+V+ G + +S+ K CF F + + Q VDYF C C W+C C CH G DV P+++NH P WACCYC +K+
Sbjct: 270 IVIYGTLRCESDLPKRCFVQTFKKDEE-----QTVDYFQCKQCSFKWICRPCMEVCHKG-HDVVPYIMNHKPEWACCYCPRKK 346 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10585.545.1 >prot_Ecto-sp13_S_contig10585.545.1 ID=prot_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp IVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQIGVIGGEAGLIRNFLVDback to top mRNA from alignment at Ecto-sp13_S_contig10585:2014..3617+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10585.545.1 ID=mRNA_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1604bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10585:2014..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10585:2014..3617+ >mRNA_Ecto-sp13_S_contig10585.545.1 ID=mRNA_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10585:2014..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |