mRNA_Ecto-sp13_S_contig10585.545.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10585.545.1
Unique NamemRNA_Ecto-sp13_S_contig10585.545.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: D7FMB3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB3_ECTSI)

HSP 1 Score: 775 bits (2002), Expect = 9.060e-281
Identity = 407/459 (88.67%), Postives = 415/459 (90.41%), Query Frame = 1
Query:    1 IVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQIGVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAGAAQXXXXGDDRDHPRVGSDDARFPTGFPPKPPFSAGNFRGEAQSVEQNQPPLTRGVLPSPAGLSPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAALQGAIEESEARFKAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTAVGGKAN 1377
            +VKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQ+GVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGA    XXXX     HP VGSDDARFP GFPPKPPFSAGNFRGE Q VEQNQPPL RGV      LSPVEE+LVRRMREAFLGYQSYYARERAAHAAEVSDLT QLSA RREETTP QGQA+TR RRAAALQGAI+ESEARF AGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIY KVRA+YAASGDEVRGFGST+RLYLQPLSATRRAGT                AAVA +GQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL AVGGKAN
Sbjct:    1 MVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQVGVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAXXXXXXXXXXXXXHPHVGSDDARFPIGFPPKPPFSAGNFRGETQPVEQNQPPLPRGVXXXXXXLSPVEEVLVRRMREAFLGYQSYYARERAAHAAEVSDLTAQLSAVRREETTPCQGQAETRARRAAALQGAIQESEARFNAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIYGKVRAHYAASGDEVRGFGSTTRLYLQPLSATRRAGTGXXXXXXXXXXXXXXXAAVAAEGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLAAVGGKAN 459          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A1S3KHH0_LINUN (E3 ubiquitin-protein ligase TRIM39 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KHH0_LINUN)

HSP 1 Score: 89.4 bits (220), Expect = 1.320e-15
Identity = 81/319 (25.39%), Postives = 139/319 (43.57%), Query Frame = 1
Query:  424 SPAGLSPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAA-----LQGAIEESEARFKAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLY-LQPLS--ATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL 1353
            SP+  SPVE +L   ++++ + ++ YY   +  H  +++ L       R  E    QG          A      Q   EE +       + +   +D +    +P  ++LP  ++L +  + V   D  L P+   + +   ++++  A GD++  FG   + +   P S  +      +V +  AGG           +   V  L D T+ +        +     +VV G V  KS+  K CF+V F   +       +VDYFSC  C +NW+C  C   CH    ++ P+++NH P WACCYC KK+   +C+L
Sbjct:  108 SPSSFSPVENVLKSHVKKSLVAHERYYQELKREHKQKLAQLDADHQ--RLIEEAKMQGLTDDELEHQIADLSQNYQRHQEELDQELSECSQMVATAYDRYLTEHIPDLTVLPIKISLCILCKNVTVKDVMLKPSDSLKEVTDYLKSHMEAEGDDIIAFGENVKYFCFGPFSKYSIDEMTQKVQSIEAGG----------ISLPDVTLLEDDTRLILRYG----LKPKSTIVVYGSVHCKSDLPKQCFSVNFEANKVY-----KVDYFSCKECGINWVCRPCMEVCHKD-HELVPYIMNHQPTWACCYCPKKK---KCQL 401          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI0003F0E4CC (tripartite motif-containing protein 12A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0E4CC)

HSP 1 Score: 86.7 bits (213), Expect = 9.380e-15
Identity = 85/321 (26.48%), Postives = 140/321 (43.61%), Query Frame = 1
Query:  439 SPVEEILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQAQTRGRRAAALQGAIEESEAR---FKAGME----ALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYL------QPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTA 1359
            SPVEE+L + ++E    +++YY   R     ++  +  +L+ +    T   Q Q Q +      L+   E+ E R   F + +E     L + +D +    LP PSLLP  V+L++ ++ + F D Q+ P +   +I   +++   +  D +  F    R  L      + LS T +    V                V T   + P +      F    G  +      ++ G V  +S+  K CFA  F + +        VDYF+C  C  NW+C  C   CH     V P+++NH P WACCYC KK+   +C L++
Sbjct:  114 SPVEEVLKKHLKEGLAAHENYYQELRTQCNHQIQMIEKELAGS----TAELQKQTQVQTDFEVKLKDLNEKYEYRKQTFLSELENCGRMLSQAYDRYLTEHLPTPSLLPIKVSLVLLNKEITFSDVQIKPNYSISHIQDILKSKMHSRDDPIITFDDDVRFILVGPFVKRSLSETHQLVNDV-----------VQHEVVHTDVVLLPRNCCPILQFGAKSGSEI------IITGRVKSQSDLPKLCFATTFEEGRG-----DSVDYFTCRDCGFNWVCKPCKESCHKDHMTV-PYIMNHHPTWACCYCPKKK---KCVLSS 404          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI001E1E2230 (E3 ubiquitin-protein ligase trul-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E2230)

HSP 1 Score: 85.9 bits (211), Expect = 1.710e-14
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLTAVG 1365
            G  +++ G V L+S+  K CF   F +        QRVDYFSC  C   W+C SC   CH G  DV P+++ H PNWACCYC KK+    C++   G
Sbjct:  318 GSVILIYGTVKLESDLPKKCFVEVFKKGDTS----QRVDYFSCNNCSFKWICRSCMEICHSG-HDVVPYIMQHQPNWACCYCPKKK---VCRIQTTG 406          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI001B88E558 (uncharacterized protein LOC121385151 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E558)

HSP 1 Score: 82.4 bits (202), Expect = 2.640e-13
Identity = 61/218 (27.98%), Postives = 92/218 (42.20%), Query Frame = 1
Query:  697 FDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQ-PLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHP--LSDATQTVFSQSPGGRVGA--GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
            +D +  + +P   +LP +V++++  + +R  D    P      I   V       GD V  +  + R+ L  PLS   +                    A    G + P    D  Q  +   P  + G   G  +V+   +  +S+  K CF  ++  Q         VDYFSC  C  NW+C SC   CH G  D KP+++NH P WACCYC KK+
Sbjct:  202 YDRYLQSHIPSLEILPVSVSVLIVEKNIRIPDLIFQPVDCLNVIQGAVERTLQERGDPVLRWDYSGRIILVGPLSRCNQ-----------------TELAAVLSGPIDPDMYPDVHQVTWQTKPIIQFGMKPGTEIVLIQCLKCESDMPKVCFVEQYKTQ-----GSHPVDYFSCTQCGFNWICRSCIQICHQG-HDTKPYVMNHKPTWACCYCPKKK 396          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A8J1TZF6_OWEFU (Ofus.G07337 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TZF6_OWEFU)

HSP 1 Score: 79.0 bits (193), Expect = 3.530e-12
Identity = 64/226 (28.32%), Postives = 97/226 (42.92%), Query Frame = 1
Query:  697 FDAHAAAALPPPSLLPCTVTLIVASRGVRF-DTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLYLQPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQSPGGRVGAGWAL------VVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKL 1353
            +D + +  +P  ++LP  V+L + S+G+   D QL P H  E+I    ++     GD +      +RL         + G      A         S  V   G  +P       +    PG R    +AL       + G +  +S+  K CFA  F +        Q+VDYFSC  CK+NW+C  C   CH       P ++ H P WACCYC KK+   +C++
Sbjct:  215 YDKYLSEHIPDLAVLPVKVSLSLLSKGITLPDVQLQPFHSVEDIIKMFKSKMVDRGDRIVHIPEDARLIS--FGPFMKKGIFEMEQA---------SREVVNHGAHNP------DILILPPGSRPLLQFALKPSSVIALYGKIQCESDLPKQCFATTFQKDAG-----QKVDYFSCKDCKINWVCRPCMEVCHKE-HSATPHIMGHQPTWACCYCPKKK---KCRM 414          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A2C9L016_BIOGL (RING-type domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L016_BIOGL)

HSP 1 Score: 77.4 bits (189), Expect = 8.930e-12
Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 1009 VHPLSDATQTVFSQSP--GGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
            +H L D    ++   P    ++  G  +V+      +S+  K CF   F +        Q VDYFSC  C + W+C SC   CH G   V PF++NH PNWACCYC K++
Sbjct:  270 LHNLDDVHSLLWDTRPILQYKMRPGSEIVLQDVFKSQSDIPKRCFVNVFDENTT-----QTVDYFSCNKCSVKWICKSCIQCCHAG-HSVTPFVMNHRPNWACCYCPKRK 373          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI000B45B3A0 (E3 ubiquitin-protein ligase TRIM62-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45B3A0)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-11
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKL 1341
            G  + + G ++L+S+  K CF     QQ       Q VDYF C  C   W+C SC   CH G  +  P+++NH P WACCYC KK++ L
Sbjct:  315 GSEIAIYGKIILESDMPKKCF-----QQVFEEGNPQSVDYFCCKQCAFQWICRSCMEVCHQG-HETVPYIMNHQPAWACCYCPKKKTCL 397          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: UPI0014589143 (uncharacterized protein LOC117334549 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589143)

HSP 1 Score: 76.3 bits (186), Expect = 2.480e-11
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 1075 GWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKL 1341
            G  + + G ++L+S+  K CF     +Q       Q VDYF C  C   W+C SC   CH G  ++ P+++NH P WACCYC KK++ L
Sbjct:  315 GSEIAIYGKIVLESDMPKKCF-----RQVFQDGNPQSVDYFCCKRCGFQWICRSCMEVCHQG-HEIVPYIMNHQPAWACCYCPKKKTCL 397          
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Match: A0A8B8DVN7_CRAVI (uncharacterized protein LOC111129789 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DVN7_CRAVI)

HSP 1 Score: 74.7 bits (182), Expect = 5.560e-11
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 1084 LVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKR 1332
            +V+ G +  +S+  K CF   F + +      Q VDYF C  C   W+C  C   CH G  DV P+++NH P WACCYC +K+
Sbjct:  270 IVIYGTLRCESDLPKRCFVQTFKKDEE-----QTVDYFQCKQCSFKWICRPCMEVCHKG-HDVVPYIMNHKPEWACCYCPRKK 346          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10585.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FMB3_ECTSI9.060e-28188.67RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1S3KHH0_LINUN1.320e-1525.39E3 ubiquitin-protein ligase TRIM39 isoform X1 n=1 ... [more]
UPI0003F0E4CC9.380e-1526.48tripartite motif-containing protein 12A-like n=1 T... [more]
UPI001E1E22301.710e-1442.27E3 ubiquitin-protein ligase trul-1-like n=1 Tax=Me... [more]
UPI001B88E5582.640e-1327.98uncharacterized protein LOC121385151 n=1 Tax=Gigan... [more]
A0A8J1TZF6_OWEFU3.530e-1228.32Ofus.G07337 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A2C9L016_BIOGL8.930e-1236.36RING-type domain-containing protein n=1 Tax=Biomph... [more]
UPI000B45B3A01.040e-1140.45E3 ubiquitin-protein ligase TRIM62-like n=1 Tax=Mi... [more]
UPI00145891432.480e-1139.33uncharacterized protein LOC117334549 n=1 Tax=Pecte... [more]
A0A8B8DVN7_CRAVI5.560e-1139.76uncharacterized protein LOC111129789 n=1 Tax=Crass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10585contigEcto-sp13_S_contig10585:2014..3617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score109.8
Seed ortholog evalue3.5e-21
Seed eggNOG ortholog10224.XP_006811660.1
Model size1392
KEGG koko:K10695
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000151,GO:0000152,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000791,GO:0000792,GO:0000803,GO:0001702,GO:0001739,GO:0003002,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006513,GO:0006807,GO:0006996,GO:0007049,GO:0007275,GO:0007276,GO:0007281,GO:0007369,GO:0007389,GO:0008150,GO:0008152,GO:0008270,GO:0009653,GO:0009790,GO:0009798,GO:0009889,GO:0009890,GO:0009892,GO:0009948,GO:0009952,GO:0009987,GO:0010390,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016604,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019904,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031519,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033522,GO:0034708,GO:0035097,GO:0035102,GO:0035518,GO:0036211,GO:0036353,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043433,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044665,GO:0044703,GO:0045892,GO:0045934,GO:0046872,GO:0046914,GO:0048468,GO:0048519,GO:0048523,GO:0048598,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071339,GO:0071535,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons2
EggNOG free text desc.histone H2A ubiquitination
EggNOG OGsKOG0311@1,KOG0311@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-17_003590.1
EC2.3.2.27
Cds size1392
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462540.0291653-CDS-Ecto-sp13_S_contig10585:2013..28471681462540.0291653-CDS-Ecto-sp13_S_contig10585:2013..2847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10585 2014..2847 +
1681462540.0425828-CDS-Ecto-sp13_S_contig10585:3059..36171681462540.0425828-CDS-Ecto-sp13_S_contig10585:3059..3617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10585 3060..3617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10585.545.1prot_Ecto-sp13_S_contig10585.545.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10585 2014..3617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10585.545.1

>prot_Ecto-sp13_S_contig10585.545.1 ID=prot_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp
IVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQIGVIGGEAGLIRNFLVD
EVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAGAAQGKGKGDDRDHPRVG
SDDARFPTGFPPKPPFSAGNFRGEAQSVEQNQPPLTRGVLPSPAGLSPVE
EILVRRMREAFLGYQSYYARERAAHAAEVSDLTVQLSAARREETTPRQGQ
AQTRGRRAAALQGAIEESEARFKAGMEALLRDFDAHAAAALPPPSLLPCT
VTLIVASRGVRFDTQLLPTHFPENIYAKVRAYYAASGDEVRGFGSTSRLY
LQPLSATRRAGTRVGAAAAGGNGDGKNSAAVATQGQVHPLSDATQTVFSQ
SPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQQQQQQEQRVDYFS
CGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECK
LTAVGGKANGAPT*
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mRNA from alignment at Ecto-sp13_S_contig10585:2014..3617+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10585.545.1 ID=mRNA_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1604bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10585:2014..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATAGTGAAGGACTGCGTGGTGACCCCTTGCGGGCACAGCTTCTGCCGCTC GTGCGCGGGGGATGCCGTGACCCGCAAGCACTGCTGCCCCGTGTGCCAAA TCGGGGTGATAGGGGGCGAGGCCGGCCTGATCCGCAACTTTCTGGTGGAC GAGGTTACCAGCACCCTGCGCAGGGCCACCGAGGATACGGACGTGGCCTA CATGCGCTTGCTGTTCGATACCGCAGCTGGCGGCACGGCTGGGGCTGGCG CTGCCCAGGGGAAGGGAAAAGGCGACGATCGTGATCATCCGCGTGTGGGA TCCGACGACGCCCGCTTTCCTACCGGGTTTCCTCCGAAACCTCCGTTCTC GGCGGGAAATTTCCGCGGGGAAGCACAGTCCGTCGAGCAAAATCAACCTC CTCTAACACGGGGGGTGCTGCCCTCTCCGGCGGGTTTGTCTCCCGTCGAA GAAATTCTCGTCAGACGGATGCGAGAGGCATTTCTTGGGTATCAGTCGTA CTACGCCCGCGAACGCGCGGCGCATGCGGCTGAGGTTAGCGACCTTACAG TGCAGCTATCCGCCGCGCGACGGGAAGAAACGACGCCGCGCCAGGGGCAG GCGCAAACACGTGGGCGTAGGGCGGCTGCGTTGCAAGGAGCCATAGAAGA GAGCGAGGCGAGGTTCAAGGCCGGCATGGAGGCGTTGCTGCGGGACTTCG ACGCGCACGCCGCGGCCGCTCTGCCGCCGCCCAGCCTCTTGCCTTGCACG GTGACGTTGATCGTGGCCTCGAGGGGCGTTCGGTTCGACACTCAGCTGCT CCCCACGCACTTTCCGGAAAACATCTACGCCAAGGTGCTGATCAAACGGT TAGCGGAATTGAGCTCTTTCGTGACTTTTGATGGAAACGGTAGGCAACCG ATACGGCAAACATACATACAGAAAACAGAGGTGCGAGCGCTTGGTTATTT CGTCCCCCTCTGTCGTACGCACGTCCATGCAACAAGTGACCGATTTTTCA CGTGTACTTTCTCCTACGTTCCATTTTGTTTTTTTTACCCACTCAGGTGC GCGCGTACTACGCTGCTTCCGGAGACGAGGTCCGAGGCTTTGGTTCAACC TCGCGTCTCTATTTACAGCCCTTATCTGCAACAAGGAGGGCTGGTACAAG AGTTGGTGCCGCTGCCGCCGGCGGTAACGGCGATGGTAAAAATAGTGCTG CTGTGGCCACGCAAGGACAGGTTCATCCGCTCAGCGACGCTACGCAGACC GTGTTCTCTCAGAGCCCGGGGGGGCGAGTCGGGGCGGGTTGGGCACTGGT TGTGGATGGACCGGTGCTGCTGAAGAGCGAGGAGATTAAGCCGTGCTTCG CCGTGGAGTTTGCTCAGCAGCAGCAGCAGCAACAACAAGAGCAACGGGTG GACTATTTTTCCTGCGGGGCGTGCAAGCTAAACTGGCTTTGCGCCTCCTG CGCGGCGCACTGTCACGGCGGTTGCGGCGACGTGAAGCCATTCATGCTGA ACCACCTGCCCAACTGGGCGTGCTGCTACTGCAGCAAGAAGAGGTCGAAG CTCGAGTGTAAGCTGACCGCGGTCGGAGGGAAAGCAAACGGAGCACCAAC TTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10585:2014..3617+

>mRNA_Ecto-sp13_S_contig10585.545.1 ID=mRNA_Ecto-sp13_S_contig10585.545.1|Name=mRNA_Ecto-sp13_S_contig10585.545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10585:2014..3617+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATAGTGAAGGACTGCGTGGTGACCCCTTGCGGGCACAGCTTCTGCCGCTC
GTGCGCGGGGGATGCCGTGACCCGCAAGCACTGCTGCCCCGTGTGCCAAA
TCGGGGTGATAGGGGGCGAGGCCGGCCTGATCCGCAACTTTCTGGTGGAC
GAGGTTACCAGCACCCTGCGCAGGGCCACCGAGGATACGGACGTGGCCTA
CATGCGCTTGCTGTTCGATACCGCAGCTGGCGGCACGGCTGGGGCTGGCG
CTGCCCAGGGGAAGGGAAAAGGCGACGATCGTGATCATCCGCGTGTGGGA
TCCGACGACGCCCGCTTTCCTACCGGGTTTCCTCCGAAACCTCCGTTCTC
GGCGGGAAATTTCCGCGGGGAAGCACAGTCCGTCGAGCAAAATCAACCTC
CTCTAACACGGGGGGTGCTGCCCTCTCCGGCGGGTTTGTCTCCCGTCGAA
GAAATTCTCGTCAGACGGATGCGAGAGGCATTTCTTGGGTATCAGTCGTA
CTACGCCCGCGAACGCGCGGCGCATGCGGCTGAGGTTAGCGACCTTACAG
TGCAGCTATCCGCCGCGCGACGGGAAGAAACGACGCCGCGCCAGGGGCAG
GCGCAAACACGTGGGCGTAGGGCGGCTGCGTTGCAAGGAGCCATAGAAGA
GAGCGAGGCGAGGTTCAAGGCCGGCATGGAGGCGTTGCTGCGGGACTTCG
ACGCGCACGCCGCGGCCGCTCTGCCGCCGCCCAGCCTCTTGCCTTGCACG
GTGACGTTGATCGTGGCCTCGAGGGGCGTTCGGTTCGACACTCAGCTGCT
CCCCACGCACTTTCCGGAAAACATCTACGCCAAGGTGCGCGCGTACTACG
CTGCTTCCGGAGACGAGGTCCGAGGCTTTGGTTCAACCTCGCGTCTCTAT
TTACAGCCCTTATCTGCAACAAGGAGGGCTGGTACAAGAGTTGGTGCCGC
TGCCGCCGGCGGTAACGGCGATGGTAAAAATAGTGCTGCTGTGGCCACGC
AAGGACAGGTTCATCCGCTCAGCGACGCTACGCAGACCGTGTTCTCTCAG
AGCCCGGGGGGGCGAGTCGGGGCGGGTTGGGCACTGGTTGTGGATGGACC
GGTGCTGCTGAAGAGCGAGGAGATTAAGCCGTGCTTCGCCGTGGAGTTTG
CTCAGCAGCAGCAGCAGCAACAACAAGAGCAACGGGTGGACTATTTTTCC
TGCGGGGCGTGCAAGCTAAACTGGCTTTGCGCCTCCTGCGCGGCGCACTG
TCACGGCGGTTGCGGCGACGTGAAGCCATTCATGCTGAACCACCTGCCCA
ACTGGGCGTGCTGCTACTGCAGCAAGAAGAGGTCGAAGCTCGAGTGTAAG
CTGACCGCGGTCGGAGGGAAAGCAAACGGAGCACCAACTTGA
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