mRNA_Ecto-sp13_S_contig10584.544.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI) HSP 1 Score: 697 bits (1798), Expect = 1.890e-241 Identity = 426/601 (70.88%), Postives = 444/601 (73.88%), Query Frame = 1
Query: 1 VAEAAAAAVVQTTSLADDGQGDTAAVSFDVSFFHCVGGTYWNSSCDSGEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXA-----AARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTAXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXDSARGTASTRRGKGAXXXXXXXXXXXX----RARQGRARPSARRVWRNGPGDESDIEQ 1776
VA+AAAA VVQTTSLADDG+G+ AA SFDVSF HC GTYWN+SCD +SVSCCELCTD+ GDEDGVNC+ GATTRTLPVQPGYWRASLDS YIRQCFNEDACQGG IVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVL V ALLT FVAALLAVYLVGGRGAVS T+TNTRE R LQRRGSGLLR EGTTRRFDF ASGGGS ALKSVGEESDGGESG +G F+G WGRRKSASIGA P SSV D KG GSK DSAG VGAGFVP ARS AA AD SN TVGSSSSG LQ AAPAVRGPG XXXXXXXXXX AAR+GE+L+RLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWM+SAACLTAG+DFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGR+ID +RS A DSARGT XXXXXXXXXXXX RARQGRARPSARRVWRNGPGDESD+EQ
Sbjct: 285 VAKAAAAVVVQTTSLADDGEGEIAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVGGDEDGVNCEIDGATTRTLPVQPGYWRASLDSDYIRQCFNEDACQGGRIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLGVTALLTFFVAALLAVYLVGGRGAVSNTLTNTREWARTLQRRGSGLLRWEGTTRRFDFRASGGGSEGHPTKGSGALKSVGEESDGGESGGTGRFMGVWGRRKSASIGAPPPGATATSAAAATGPLSSVTDIKGGGSKPDSAGAVGAGFVPPARSPAAAAAWDAAAGSALVHPTMRRADKEGE----ADASNNTVGSSSSGSGLQSCAAPAVRGPGSGGKGACGXXXXXXXXXXXXXXXXAARVGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMMSAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRVIDTRARSNASSSGSVSPHAPAAS--------------------DSARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDLEQ 861
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 675 bits (1742), Expect = 1.700e-226 Identity = 431/581 (74.18%), Postives = 451/581 (77.62%), Query Frame = 1
Query: 64 DTAAVSFDVSFFHCVGGTYWNSSCDSGEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGG-GSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGP-----GXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTAXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXDSARGTASTRRGKGAXXXXXXXXXXXXRAR----QGRARPSARRVWRNGPGDESDIEQ 1776
DTAA SFDVSFFHC+ GTYWN+ CD+G +S SCCELCTDLDGDEDGV+C++ GATTRTLPVQ GYWRASLDSVYIRQCFNEDAC+GGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVA+LLTLFV ALLAVYLVGGRGAVS TMTNTRESVRMLQ+RGSGLLRSEGTTRRFDFSASGG S LKSVGEESDGGESG SG F+GAWGRR SASIG PSSSV DSKGAG+K DSAG +GA F+PLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGR LQPSAAPAVRGP G AAARIGE+L+RLPLSKLKIVVVVWQISNAFAE+TKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAG+DFYDKLLIVTIGPVGLLLLLGFTFYLGARPVR GR+IDMS R+ P DSARGTAST XXXXXXXXXXXX QGRARPSARRVWRNGPGDESDIEQ
Sbjct: 572 DTAAASFDVSFFHCLEGTYWNNECDTGGDSDSCCELCTDLDGDEDGVDCEDMGATTRTLPVQSGYWRASLDSVYIRQCFNEDACRGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAVYLVGGRGAVSNTMTNTRESVRMLQKRGSGLLRSEGTTRRFDFSASGGWSSWQHPTKGGDPLKSVGEESDGGESGGSGRFMGAWGRRMSASIGVPMRGAAITCAAAATGPSSSVNDSKGAGNKLDSAGTMGADFLPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XSGRGLQPSAAPAVRGPRGDGKGARGGQQQGMGGGDRKKKTAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNTSTSVSSATAATLAAYDSGISGSVRPRAGAS----DSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQ 1145
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 661 bits (1705), Expect = 7.180e-215 Identity = 474/600 (79.00%), Postives = 486/600 (81.00%), Query Frame = 1
Query: 1 VAEAAAAAVVQTTSLADDGQGDTAAVSFDVSFFHCVGGTYWNSSCDSGEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASG-GGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTAXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXDS---ARGTASTRRGKGAXXXXXXXXXXXX----RARQGRARPSARRVWRNGPGDESDIEQ 1776
VAE AAA VVQTTSLAD G+ +TA SFDVSF C GTYWN+SCD+ E + CCELCTD+ GDEDGVNCDE GATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCA GYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGT RRF+FSASG G S ALKSVGEESDGGESG SG FLGAWGRRKS IGA XXXXXXXXXXXXXX SV DSKGAGSK+DSAG V AGF PLARSRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXAAARIGE+L+RLPLSKLKIV+VVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRI+DMSSRSTA P XXXXXXXX ARGT XXXXXXXXXXXX RARQGRARPSARRVWRNGPGDESDIEQ
Sbjct: 1014 VAETAAAGVVQTTSLADVGERETATASFDVSFVRCESGTYWNNSCDAKESA--CCELCTDVGGDEDGVNCDENGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCAPGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTNRRFNFSASGDGSSGEHPSKSGGALKSVGEESDGGESGGSGRFLGAWGRRKSTRIGAPXXXXXXXXXXXXXXXXXSVNDSKGAGSKSDSAGTVVAGFAPLARSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARIGEMLARLPLSKLKIVIVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIVDMSSRSTASDSVSSATVATLEAYDSGSSRSVRPQXXXXXXXXXXXXXARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQ 1611
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 640 bits (1651), Expect = 1.500e-208 Identity = 431/598 (72.07%), Postives = 441/598 (73.75%), Query Frame = 1
Query: 1 VAEAAAAAVVQTTSLADDGQGDTAAVSFDVSFFHCVGGTYWNSSCDSGEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXX-ALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXA-----AARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTAXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXDSARGTASTRRGKGAXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQ 1776
VAEAAAA VVQTTSLADDG+G+TAA SFDVSF HC GTYWN+SCD +SVSCCELCTD+DGDEDGVNCDE GATTRTLP+Q GYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRF FSASGGGS ALKSVGEESDGGESG SG FLGAWGRRKSASIGA PSSSV D KGAGSKADSAG VGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R LQPSAAPAVRGP XXXXXXXXXXXXXXXXXX AARIGE+L+RLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAG+DFYDKLL RGKGA RARQGRARPSARRVWRNGPGDESD+EQ
Sbjct: 901 VAEAAAAVVVQTTSLADDGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVDGDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVND-KGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL----------------------------------------------------------------------------------RGKGASRTAMAAAAAAERARQGRARPSARRVWRNGPGDESDLEQ 1412
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 274 bits (701), Expect = 3.970e-76 Identity = 181/474 (38.19%), Postives = 243/474 (51.27%), Query Frame = 1
Query: 76 VSFDVSFFHCVGGTYWNSSCDSGE-ESVSCCELCTD-LDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPS--SSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVS---NKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRK 1476
V+ V + C G++WNSS + + C+LCT+ +DG +GV+C GATT+ LP++ GYWRA + S+ IR+C NE+AC+GG+ VA QEYCN GY GPQCAVC +G+G+GVA CH CTA F+GGMYF+LA YLVGG+ AVS+T+ +T+ES +Q RGS LL TR+ + ++GR +S PS SS + +K G++ +A DVS ++ G+ +G D A P R+ +L+ LPLSKLKIV+VVWQI++AFA+ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT G+DFYDKLLIVTIGP+ L LG TF++G+RP ++
Sbjct: 1002 VTVSVEHYLCDEGSFWNSSVSGADLDPTVACKLCTESIDGAVEGVDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLL-----TRK---------------------------------------VSSFGRARS------------DFGDLTEGPSVESSAVSTKAWGTEGKAA--------------------------------------------PTDVSVGGSRGQGTGGTGNDRDDDAPPT--------------------------RVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKE 1349
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 261 bits (666), Expect = 1.550e-71 Identity = 181/481 (37.63%), Postives = 234/481 (48.65%), Query Frame = 1
Query: 76 VSFDVSFFHCVGGTYWNSSCDSGE-ESVSCCELCTD-LDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTA 1512
V+ V ++ C G +WNSS + + C LCT+ +DG +GV+C GATT LP++ GYWRA++ S+ IR+CFNE AC+GG+ VA QEYCN GY GPQCAVC +G+G+G+A+ CH CTA FKGGMYF+LAV +YLVGG+ AVS+T+ NT+ES +Q RGS LL R DF G SDG G S + G A+ P S S+G G +S +G D A+P R+ +L+ LPLSKLKIV+ +ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT G+DFYDKLL+VTIGP+ L LG TF++G+RP +K +MS +TA
Sbjct: 782 VTVGVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQEYCNEGYVGPQCAVCETGFGKGMADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKSAVSSTVVNTKESALRIQHRGSVLLTRSVDNARPDF---------------------GGLSDGPPIGGSAVSTNSPGTEHKAA-----------------PPEVSAGQSRGQG------------------------------------------------------------NSRAGNDKDDDASPR--------------------------RVANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKK---TNMSPNTTA 1125
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 252 bits (644), Expect = 1.180e-68 Identity = 190/484 (39.26%), Postives = 250/484 (51.65%), Query Frame = 1
Query: 76 VSFDVSFFHCVGGTYWNSSCDSGE-ESVSCCELCTD-LDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLL-RSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPS--SSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTA 1512
V+ V ++ C G +WNSS + + C LCT+ +DG +GV+C GATT LP++ GYWRA++ S+ IR+CFNE AC+GG+ VA Q+YCN GY GPQCAVC +G+G+GVA+ CH CTA FKGGMYF+LAV +YLVGG+ AVS+T+ +T+ES +Q RGS LL RS G+ R A G+ ++G PS SS + +K G++ G V + +SR XXXXXXXXXXXX D +P+ R+ +L+ LPLSKLKIV+ +ITK PFPP+YEKFLSIIGIFSFDLGW++SAACLT G+DFYDKLLIVTIGP+ L LG TF++G+RP ++ +MS +TA
Sbjct: 818 VTISVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQDYCNEGYVGPQCAVCDTGFGKGVADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKRAVSSTVVSTKESALRIQHRGSVLLTRSVGSVGR-------------------ARSDFGDLTEG--------------------------------------PSVESSAVSTKARGAQ----GKAAPTDVSVGQSRGQXXXXXXXXXXXX--------------------------------DARPT------------------------------RVANLLAALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRPAKE---TNMSPNATA 1165
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE) HSP 1 Score: 206 bits (525), Expect = 4.110e-54 Identity = 229/418 (54.78%), Postives = 244/418 (58.37%), Query Frame = 1
Query: 556 MTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGG-GSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSG-RDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXX-----AAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIIDMSSRSTAXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXDSARGT----ASTRRGKGAXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQ 1776
MTNTRESVRMLQ+RGSGLLRS+ TTRR DF ASGG S ALK++GEESDGGESG SG FLGAWGRRKSASIG + +GA + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX R LQPSAAPAVRGP XXXXXXXXXXXXXXXXXX AA RIGE+L+RLPLSK AFAEITKVPFPPVYEKFLSIIG FSF LGW+ISAACLTAG DFYDKLL+ + L I S R+ A D ARGT A+TRRGKG XXXXXXX RARQGRARPSARRVWR+GPGDESDIEQ
Sbjct: 1 MTNTRESVRMLQKRGSGLLRSDSTTRRLDFGASGGWSSWRHPIEGGDALKNLGEESDGGESGGSGRFLGAWGRRKSASIG---------------------VPMRGAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXXXXXXXXXXXXXXXXTAAVRIGEMLARLPLSKDCR-------RCAFAEITKVPFPPVYEKFLSIIGTFSFGLGWVISAACLTAGNDFYDKLLVSSATAATL--------------AAYDSGISGSVRTRAGAS-------------------------------DPARGTTSTTATTRRGKGPSRTAXXXXXXXERARQGRARPSARRVWRSGPGDESDIEQ 345
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.740e-38 Identity = 138/451 (30.60%), Postives = 197/451 (43.68%), Query Frame = 1
Query: 142 GEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTAS-----FKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGRDLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVLSRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKG 1479
GE++ CE C ++G E G++C+ GAT +LPV+ GYWR+ +S+ I QC AC G + ++S Q+YC GY+GP CAVCA G+GRG N+CH C + G F L + L+ L VA YLVGG AV GL RS T+ D S G +S ++G+S S SIG +S ++ +GA +A G VP++ DVS +SS +A P VRG G +I +RLP+ K+KI+VVVWQI + F IT V FPP Y +FLS I + SFDL ++SA+C+ +DFY +LL+ T+ P+G+ ++L T+++ R G
Sbjct: 858 GEDTTFSCEQCASVNGAE-GLDCEIPGATLASLPVREGYWRSGGESLTIHQCSPSSACVGAAQISSAQDYCGEGYQGPYCAVCAEGFGRGAGNSCHSCEGTKSRLLIAAGSLFALVILLLIILTVA-----YLVGGLDAVE------------------GLRRSLSTSFVGDRSVLSG-----------------RDSSSHKTGSS-----------SKSIGRDRLADSVAPTFKV----TSEVEERGA---EGAASRKGVTSVPVSE---------------------------------VDVSEMKSDASSDTDTEDDNAPPMVRGGGQPGCCGH------------GEKIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRAGSG 1204
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 148 bits (374), Expect = 1.030e-33 Identity = 147/489 (30.06%), Postives = 211/489 (43.15%), Query Frame = 1
Query: 25 VVQTTSLADDGQGDTAAVSFDV--SFFHCVGGTYWNSSCDSGEESVSCCELCTDLDGDEDGVNCDEKGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFDFSASGGGSXXXXXXXXXALKSVGEESDGGESGASGGFLGAWGRRKSASIGAXXXXXXXXXXXXXXXPSSSVIDSKGAGSKADSAGNVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVSNKTVGSSSSGR---DLQPSAAPAVRGPGXXXXXXXXXXXXXXXXXXAAARIGEVL----SRLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGAR 1464
VV T TA V +V +F+ C Y + GEE V+C E C LDG E GV+C+ GAT +LPV+ G+WR+S +S+ I C + DAC G + + + +YC+ GYEGP CAVCA GYG+GV N CH CT S + +V L+ AV+L+GG AV++ + S+R+ G R+E + F A + V + + +SG GG + + G S ID A N+ +PLA + A +VG D AAPA G + +GE + SR+PL KLKI+VVVWQI F IT V +PP Y +FLS I + +FD+G + SA+C + FY++LL+ T+ P+GL +L T+++ R
Sbjct: 861 VVATVGSGTSADSATAGVGLEVETAFYLCEAFEY---AMPDGEEQVTC-EQCVLLDGAE-GVDCELPGATQTSLPVRAGHWRSSEESLVIHGCLHSDACVGATEIVTSDDYCDGGYEGPYCAVCAEGYGKGVGNTCHSCTGSKARLLIAAGSVFFLVAXXXXXXAAVFLIGGLDAVASVRGSVARSLRVP---GKTTTRAE---QPFPPPGPTLPERSASARNISASRQVDDPAVEFDSGEVGGPI---------TGGGFDAPDDLFGYDNGEDKSDGSIDFSDA--------NL---VLPLAIA----------------------------GKDAAFCERFSVGGGGGSHPPVDADADAAPAEAVAGGQS---------------GSRGLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAKR 1275 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10584.544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10584.544.1 >prot_Ecto-sp13_S_contig10584.544.1 ID=prot_Ecto-sp13_S_contig10584.544.1|Name=mRNA_Ecto-sp13_S_contig10584.544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=592bp VAEAAAAAVVQTTSLADDGQGDTAAVSFDVSFFHCVGGTYWNSSCDSGEEback to top mRNA from alignment at Ecto-sp13_S_contig10584:738..5770- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10584.544.1 ID=mRNA_Ecto-sp13_S_contig10584.544.1|Name=mRNA_Ecto-sp13_S_contig10584.544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5033bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10584:738..5770- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10584:738..5770- >mRNA_Ecto-sp13_S_contig10584.544.1 ID=mRNA_Ecto-sp13_S_contig10584.544.1|Name=mRNA_Ecto-sp13_S_contig10584.544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1776bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10584:738..5770- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |