mRNA_Ecto-sp13_S_contig10583.542.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI) HSP 1 Score: 485 bits (1249), Expect = 8.940e-166 Identity = 238/251 (94.82%), Postives = 243/251 (96.81%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIFAFDDAAASRSQILA 754
TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGA+TS DSRRAARDLRTGKA LAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVL QLTGDPVYREWGWEIFR ++ RHCR+GVAYGSHPDVENPGL+AKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF FDDAAA RSQILA
Sbjct: 505 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA--LAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLHQLTGDPVYREWGWEIFRAIE-RHCRVGVAYGSHPDVENPGLEAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIFTFDDAAAGRSQILA 752
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A6H5L0M9_9PHAE (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M9_9PHAE) HSP 1 Score: 338 bits (866), Expect = 6.500e-109 Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAARDLRTGKAS-ALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVD 514
TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGA+TS DSR AARDLRTGKAS ALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVL QLTGDPVYREWGWEIFRHVD
Sbjct: 505 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSPDSRGAARDLRTGKASVALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLHQLTGDPVYREWGWEIFRHVD 676
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S1YR71_9STRA (alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR71_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.420e-87 Identity = 136/240 (56.67%), Postives = 172/240 (71.67%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARG-LTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSAD---SRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKI 709
+ GA+GDSFYEYLLKVW+QGG++E++YRRMY+ AMDGV + LVQ+ G LTY++E N R +MDHL+CF+ G LAL A T+ D S RA RDLR GKA LAYTCYQMY ++ TG++PE V F+ D++ A +YILRPE E+FF+L LTGDP YREWGWEIF+ +++ HC+ + Y S DV NP D MESFF ETLKYL+LL PD +DL E NTEAHPL++
Sbjct: 175 SLGAMGDSFYEYLLKVWLQGGKKEDNYRRMYDKAMDGVHKYLVQEQPGVLTYIAEMNNGRINRKMDHLSCFMGGTLALRAYTNPDGLNSDRAQRDLRLGKA--LAYTCYQMYAQSNTGIAPEYVRFSDKNDLQLSKHAPYYILRPEAAETFFILHTLTGDPTYREWGWEIFQAIEH-HCKTDIGYASLVDVNNPEAGQNDKMESFFLAETLKYLFLLQDPDTELDLEERVFNTEAHPLRL 411
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK) HSP 1 Score: 280 bits (715), Expect = 3.750e-87 Identity = 141/242 (58.26%), Postives = 167/242 (69.01%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTS---ADSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF 712
TFGALGDS+YEYLLK W+QGGRRE R MY+ A+ GV + LVQ+ G YL++ G R +H+MDHLACF+A LALGA T ADS RA RD++ K L +TCYQMY RTATGLSPE VEF D+ A FYILRPE +E+ F L T D YREW WEIF+ ++ +HCR +AYG+HPDV N G K D MESFF ET KYLYL+ PD PIDL EY NTEAHP+K+F
Sbjct: 378 TFGALGDSYYEYLLKTWLQGGRREGYLREMYDAAVQGVHDKLVQRTTPSGFLYLADLEGGRVKHKMDHLACFMAATLALGAHTDPQGADSPRARRDMQVAKE--LGHTCYQMYRRTATGLSPEFVEFRAGQDIVNPSSASFYILRPEAVEALFYLYWFTKDHTYREWSWEIFQAIE-KHCRTSIAYGAHPDVRNTGRKPDDRMESFFLAETFKYLYLIQDPDQPIDLYEYVFNTEAHPMKVF 616
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.270e-86 Identity = 136/242 (56.20%), Postives = 168/242 (69.42%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAA---RDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF 712
TFGALGDSFYEYLLKVW+QGG++E YR MY+ AMDG+ L++ L Y+S+W+G R H+MDHL CF+ G LALGA +S +R A RDL+ KA LAYTCYQMY R ATGLS E VEF G D A +A FYILRPE ES F+L QLTG+P+YREWGW +F+ ++ R+ ++ YG+HPDV + D MESFF ETLKYLYLL PDH + L + NTEAHPL ++
Sbjct: 288 TFGALGDSFYEYLLKVWLQGGKKEGMYREMYDRAMDGMTNKLLKTTTPSNLMYVSDWDGNRNVHKMDHLVCFVPGMLALGAYSSDGTRGAGNKWRDLKNAKA--LAYTCYQMYARMATGLSAEYVEFRGGQDFVAAPRAPFYILRPEASESLFILHQLTGNPIYREWGWRMFQAIE-RYTKVEYGYGAHPDVRDTARTPDDRMESFFLAETLKYLYLLQSPDHDVSLENFVFNTEAHPLSVW 526
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S2PJG9_9STRA (alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PJG9_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.060e-84 Identity = 137/244 (56.15%), Postives = 177/244 (72.54%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSE-WNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
+FGA DS YEY++K+++QGGR+EE YR+M++ AM+GV E L+QK+ GLTY+++ NG R H+MDHLACF+ G+LALGA T DS RA RDL+T KA L YTCYQMY RT TG+SPE V+F G D + A FYILRPE +E+F+ L LTGDP+YREWGWE+F+ ++ ++C+ YGS DV P +K +D MESFF ETLKYLYLL PD ID++ ++ NTEAHP KIF
Sbjct: 497 SFGACSDSAYEYMIKIYVQGGRKEEMYRKMWDKAMNGVHEQLLQKSTPNGLTYIADRLNGGRLDHKMDHLACFMGGSLALGAYTDPSGIDSSRAKRDLKTAKA--LTYTCYQMYARTQTGISPEFVQFRGGNDFKVPSSAPFYILRPEVVEAFYYLSVLTGDPIYREWGWEVFQSIE-KYCKTEYGYGSLHDVNEPSMKPEDRMESFFLAETLKYLYLLFDPDSEIDILNKHVFNTEAHPFKIF 737
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S2UB93_9STRA (alpha-1,2-Mannosidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB93_9STRA) HSP 1 Score: 274 bits (700), Expect = 4.260e-84 Identity = 138/249 (55.42%), Postives = 175/249 (70.28%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQ--KARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIFAFDDAA 730
TFGA+GDS YEY+LK+W+QGG+ E YR MY++AM G+ E+L+Q K L Y+++ N H+MDHL CF+ G+L LGA T DS RA RDL+ GK LAYTCYQMY RT TG+SPEVV F G D A FYILRPET+E+FF+L LTGDP+YREWGWE+F+ ++ R C+ +AYGS DV N G +D MESFF ET+KYLYLL PD ID++ ++ NTEAHP++IF+ D A
Sbjct: 460 TFGAMGDSIYEYMLKIWLQGGKTEPLYRTMYDNAMQGMHEMLLQYSKPSNLAYIADQNSGNLDHKMDHLVCFMGGSLVLGAYTDPLGLDSERAQRDLKVGKQ--LAYTCYQMYARTKTGISPEVVRF-GEHDFSTDHGAPFYILRPETVETFFILNHLTGDPIYREWGWEVFQSIE-RFCKTKIAYGSLHDVNNDGQGPEDRMESFFLAETMKYLYLLQDPDTEIDILHKHVFNTEAHPVRIFSEMDKA 704
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: B8C1C0_THAPS (alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C0_THAPS) HSP 1 Score: 266 bits (681), Expect = 4.900e-84 Identity = 131/243 (53.91%), Postives = 174/243 (71.60%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSAD---SRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
+FG +GDS YEY LK W+QGGR+E+SYR +++ +++G+ L+QK+ GLTY++E NG + H+M HL CF+AG+LALG+ T D S RA RDL+ KA LAYTCYQMY R+ TG+SPE V FNG D A Y+LRPE +ESF+ L LTGDP+YREWGWE+F+ ++ ++CR YGS +V+ P ++ +D MESFF ETLKYLYLL PD ID++ ++ NTEAHPLKIF
Sbjct: 203 SFGGMGDSAYEYFLKAWLQGGRKEKSYRDLWDRSVNGMHRNLLQKSSPNGLTYIAEKNGKKMDHKMGHLTCFMAGSLALGSYTDPDGFDSPRAQRDLKAAKA--LAYTCYQMYARSKTGISPEYVNFNGCDDFHISVSAPNYVLRPEVVESFYYLSVLTGDPIYREWGWEVFQSIE-KYCRAQYGYGSLKNVDLPSMQPQDEMESFFLAETLKYLYLLFDPDSEIDILNKHVFNTEAHPLKIF 442
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: B8C1C1_THAPS (alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C1_THAPS) HSP 1 Score: 266 bits (680), Expect = 6.740e-84 Identity = 130/243 (53.50%), Postives = 172/243 (70.78%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
+FGA+GDS YEY++K+W+QGGR+E+ YR M++ +M GV E L+QK+ GL+Y+++ R H+MDHL CF+ G LA+GA T DS RA RDL+T KA L YTCYQMY R+ TG++PE V F G D A FYILRPET+E+F+ L LTGDP+YREWGWEIF+ ++ ++CR+ YGS V+N + +D MESFF ETLKY YLL PD ID++ ++ NTEAHP+KIF
Sbjct: 203 SFGAMGDSTYEYMIKMWLQGGRKEQKYRDMWDHSMSGVHEQLLQKSSPNGLSYIADRVSGRIDHKMDHLVCFMGGALAIGAYTDPLGFDSPRAQRDLKTAKA--LTYTCYQMYARSKTGIAPEFVRFAGGNDFEIPSSAPFYILRPETVEAFYYLSVLTGDPIYREWGWEIFQSIE-KYCRVQYGYGSLKHVDNVNMNPEDRMESFFMAETLKYFYLLFDPDSEIDILNKHVFNTEAHPMKIF 442
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S4N8K7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8K7_9STRA) HSP 1 Score: 266 bits (679), Expect = 8.880e-83 Identity = 133/243 (54.73%), Postives = 172/243 (70.78%), Query Frame = 2
Query: 2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFN-GAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKI 709
+FGA+GDSFYEY+LK+W+QGG++E YR MY+ ++ G+ + L+ K+ GLTY+++ R H+MDHL CF+ G LALGA T DS RA RDL+T K L YTCYQMY R TG+SPE V F + D A FYILRPET+ESFFVL QLTGDP YREWGWE+F+ ++ R+CR +AYGS +V NPG +D MESFF ET+KYLYLL PD +D++ ++ NTEAHP++I
Sbjct: 277 SFGAMGDSFYEYMLKIWLQGGKKESMYREMYDRSIQGMHDELLFKSTPTGLTYIADKVSGRVDHKMDHLVCFMGGLLALGAYTDPQGFDSTRAQRDLKTAKE--LTYTCYQMYARMKTGISPEFVAFGKDSNDFTVGHNAAFYILRPETVESFFVLNQLTGDPAYREWGWEVFQSIE-RYCRTDIAYGSLTNVNNPGAAPEDRMESFFLAETIKYLYLLFDPDTEVDIVNKHVFNTEAHPMRI 516 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10583.542.1 >prot_Ecto-sp13_S_contig10583.542.1 ID=prot_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp YLWGLGRLVLRVPVESVDAGRPSRRELPQDVRRCHGRCSGAPRPEGPRSNback to top mRNA from alignment at Ecto-sp13_S_contig10583:2014..4458- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10583.542.1 ID=mRNA_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10583:2014..4458- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10583:2014..4458- >mRNA_Ecto-sp13_S_contig10583.542.1 ID=mRNA_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10583:2014..4458- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |