mRNA_Ecto-sp13_S_contig10583.542.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10583.542.1
Unique NamemRNA_Ecto-sp13_S_contig10583.542.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 8.940e-166
Identity = 238/251 (94.82%), Postives = 243/251 (96.81%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIFAFDDAAASRSQILA 754
            TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGA+TS DSRRAARDLRTGKA  LAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVL QLTGDPVYREWGWEIFR ++ RHCR+GVAYGSHPDVENPGL+AKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF FDDAAA RSQILA
Sbjct:  505 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA--LAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLHQLTGDPVYREWGWEIFRAIE-RHCRVGVAYGSHPDVENPGLEAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIFTFDDAAAGRSQILA 752          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A6H5L0M9_9PHAE (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M9_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 6.500e-109
Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAARDLRTGKAS-ALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVD 514
            TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGA+TS DSR AARDLRTGKAS ALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVL QLTGDPVYREWGWEIFRHVD
Sbjct:  505 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSPDSRGAARDLRTGKASVALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLHQLTGDPVYREWGWEIFRHVD 676          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S1YR71_9STRA (alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR71_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.420e-87
Identity = 136/240 (56.67%), Postives = 172/240 (71.67%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARG-LTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSAD---SRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKI 709
            + GA+GDSFYEYLLKVW+QGG++E++YRRMY+ AMDGV + LVQ+  G LTY++E N  R   +MDHL+CF+ G LAL A T+ D   S RA RDLR GKA  LAYTCYQMY ++ TG++PE V F+   D++    A +YILRPE  E+FF+L  LTGDP YREWGWEIF+ +++ HC+  + Y S  DV NP     D MESFF  ETLKYL+LL  PD  +DL E   NTEAHPL++
Sbjct:  175 SLGAMGDSFYEYLLKVWLQGGKKEDNYRRMYDKAMDGVHKYLVQEQPGVLTYIAEMNNGRINRKMDHLSCFMGGTLALRAYTNPDGLNSDRAQRDLRLGKA--LAYTCYQMYAQSNTGIAPEYVRFSDKNDLQLSKHAPYYILRPEAAETFFILHTLTGDPTYREWGWEIFQAIEH-HCKTDIGYASLVDVNNPEAGQNDKMESFFLAETLKYLFLLQDPDTELDLEERVFNTEAHPLRL 411          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK)

HSP 1 Score: 280 bits (715), Expect = 3.750e-87
Identity = 141/242 (58.26%), Postives = 167/242 (69.01%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTS---ADSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF 712
            TFGALGDS+YEYLLK W+QGGRRE   R MY+ A+ GV + LVQ+    G  YL++  G R +H+MDHLACF+A  LALGA T    ADS RA RD++  K   L +TCYQMY RTATGLSPE VEF    D+     A FYILRPE +E+ F L   T D  YREW WEIF+ ++ +HCR  +AYG+HPDV N G K  D MESFF  ET KYLYL+  PD PIDL EY  NTEAHP+K+F
Sbjct:  378 TFGALGDSYYEYLLKTWLQGGRREGYLREMYDAAVQGVHDKLVQRTTPSGFLYLADLEGGRVKHKMDHLACFMAATLALGAHTDPQGADSPRARRDMQVAKE--LGHTCYQMYRRTATGLSPEFVEFRAGQDIVNPSSASFYILRPEAVEALFYLYWFTKDHTYREWSWEIFQAIE-KHCRTSIAYGAHPDVRNTGRKPDDRMESFFLAETFKYLYLIQDPDQPIDLYEYVFNTEAHPMKVF 616          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.270e-86
Identity = 136/242 (56.20%), Postives = 168/242 (69.42%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSADSRRAA---RDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIF 712
            TFGALGDSFYEYLLKVW+QGG++E  YR MY+ AMDG+   L++      L Y+S+W+G R  H+MDHL CF+ G LALGA +S  +R A    RDL+  KA  LAYTCYQMY R ATGLS E VEF G  D  A  +A FYILRPE  ES F+L QLTG+P+YREWGW +F+ ++ R+ ++   YG+HPDV +      D MESFF  ETLKYLYLL  PDH + L  +  NTEAHPL ++
Sbjct:  288 TFGALGDSFYEYLLKVWLQGGKKEGMYREMYDRAMDGMTNKLLKTTTPSNLMYVSDWDGNRNVHKMDHLVCFVPGMLALGAYSSDGTRGAGNKWRDLKNAKA--LAYTCYQMYARMATGLSAEYVEFRGGQDFVAAPRAPFYILRPEASESLFILHQLTGNPIYREWGWRMFQAIE-RYTKVEYGYGAHPDVRDTARTPDDRMESFFLAETLKYLYLLQSPDHDVSLENFVFNTEAHPLSVW 526          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S2PJG9_9STRA (alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PJG9_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.060e-84
Identity = 137/244 (56.15%), Postives = 177/244 (72.54%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSE-WNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
            +FGA  DS YEY++K+++QGGR+EE YR+M++ AM+GV E L+QK+   GLTY+++  NG R  H+MDHLACF+ G+LALGA T     DS RA RDL+T KA  L YTCYQMY RT TG+SPE V+F G  D +    A FYILRPE +E+F+ L  LTGDP+YREWGWE+F+ ++ ++C+    YGS  DV  P +K +D MESFF  ETLKYLYLL  PD  ID++ ++  NTEAHP KIF
Sbjct:  497 SFGACSDSAYEYMIKIYVQGGRKEEMYRKMWDKAMNGVHEQLLQKSTPNGLTYIADRLNGGRLDHKMDHLACFMGGSLALGAYTDPSGIDSSRAKRDLKTAKA--LTYTCYQMYARTQTGISPEFVQFRGGNDFKVPSSAPFYILRPEVVEAFYYLSVLTGDPIYREWGWEVFQSIE-KYCKTEYGYGSLHDVNEPSMKPEDRMESFFLAETLKYLYLLFDPDSEIDILNKHVFNTEAHPFKIF 737          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S2UB93_9STRA (alpha-1,2-Mannosidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB93_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.260e-84
Identity = 138/249 (55.42%), Postives = 175/249 (70.28%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQ--KARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIFAFDDAA 730
            TFGA+GDS YEY+LK+W+QGG+ E  YR MY++AM G+ E+L+Q  K   L Y+++ N     H+MDHL CF+ G+L LGA T     DS RA RDL+ GK   LAYTCYQMY RT TG+SPEVV F G  D      A FYILRPET+E+FF+L  LTGDP+YREWGWE+F+ ++ R C+  +AYGS  DV N G   +D MESFF  ET+KYLYLL  PD  ID++ ++  NTEAHP++IF+  D A
Sbjct:  460 TFGAMGDSIYEYMLKIWLQGGKTEPLYRTMYDNAMQGMHEMLLQYSKPSNLAYIADQNSGNLDHKMDHLVCFMGGSLVLGAYTDPLGLDSERAQRDLKVGKQ--LAYTCYQMYARTKTGISPEVVRF-GEHDFSTDHGAPFYILRPETVETFFILNHLTGDPIYREWGWEVFQSIE-RFCKTKIAYGSLHDVNNDGQGPEDRMESFFLAETMKYLYLLQDPDTEIDILHKHVFNTEAHPVRIFSEMDKA 704          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: B8C1C0_THAPS (alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C0_THAPS)

HSP 1 Score: 266 bits (681), Expect = 4.900e-84
Identity = 131/243 (53.91%), Postives = 174/243 (71.60%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSAD---SRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
            +FG +GDS YEY LK W+QGGR+E+SYR +++ +++G+   L+QK+   GLTY++E NG +  H+M HL CF+AG+LALG+ T  D   S RA RDL+  KA  LAYTCYQMY R+ TG+SPE V FNG  D      A  Y+LRPE +ESF+ L  LTGDP+YREWGWE+F+ ++ ++CR    YGS  +V+ P ++ +D MESFF  ETLKYLYLL  PD  ID++ ++  NTEAHPLKIF
Sbjct:  203 SFGGMGDSAYEYFLKAWLQGGRKEKSYRDLWDRSVNGMHRNLLQKSSPNGLTYIAEKNGKKMDHKMGHLTCFMAGSLALGSYTDPDGFDSPRAQRDLKAAKA--LAYTCYQMYARSKTGISPEYVNFNGCDDFHISVSAPNYVLRPEVVESFYYLSVLTGDPIYREWGWEVFQSIE-KYCRAQYGYGSLKNVDLPSMQPQDEMESFFLAETLKYLYLLFDPDSEIDILNKHVFNTEAHPLKIF 442          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: B8C1C1_THAPS (alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C1_THAPS)

HSP 1 Score: 266 bits (680), Expect = 6.740e-84
Identity = 130/243 (53.50%), Postives = 172/243 (70.78%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKIF 712
            +FGA+GDS YEY++K+W+QGGR+E+ YR M++ +M GV E L+QK+   GL+Y+++    R  H+MDHL CF+ G LA+GA T     DS RA RDL+T KA  L YTCYQMY R+ TG++PE V F G  D      A FYILRPET+E+F+ L  LTGDP+YREWGWEIF+ ++ ++CR+   YGS   V+N  +  +D MESFF  ETLKY YLL  PD  ID++ ++  NTEAHP+KIF
Sbjct:  203 SFGAMGDSTYEYMIKMWLQGGRKEQKYRDMWDHSMSGVHEQLLQKSSPNGLSYIADRVSGRIDHKMDHLVCFMGGALAIGAYTDPLGFDSPRAQRDLKTAKA--LTYTCYQMYARSKTGIAPEFVRFAGGNDFEIPSSAPFYILRPETVEAFYYLSVLTGDPIYREWGWEIFQSIE-KYCRVQYGYGSLKHVDNVNMNPEDRMESFFMAETLKYFYLLFDPDSEIDILNKHVFNTEAHPMKIF 442          
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Match: A0A7S4N8K7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8K7_9STRA)

HSP 1 Score: 266 bits (679), Expect = 8.880e-83
Identity = 133/243 (54.73%), Postives = 172/243 (70.78%), Query Frame = 2
Query:    2 TFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAVTSA---DSRRAARDLRTGKASALAYTCYQMYLRTATGLSPEVVEFN-GAGDMRARDQARFYILRPETLESFFVLQQLTGDPVYREWGWEIFRHVDYRHCRIGVAYGSHPDVENPGLKAKDHMESFFPGETLKYLYLLMQPDHPIDLM-EYTLNTEAHPLKI 709
            +FGA+GDSFYEY+LK+W+QGG++E  YR MY+ ++ G+ + L+ K+   GLTY+++    R  H+MDHL CF+ G LALGA T     DS RA RDL+T K   L YTCYQMY R  TG+SPE V F   + D      A FYILRPET+ESFFVL QLTGDP YREWGWE+F+ ++ R+CR  +AYGS  +V NPG   +D MESFF  ET+KYLYLL  PD  +D++ ++  NTEAHP++I
Sbjct:  277 SFGAMGDSFYEYMLKIWLQGGKKESMYREMYDRSIQGMHDELLFKSTPTGLTYIADKVSGRVDHKMDHLVCFMGGLLALGAYTDPQGFDSTRAQRDLKTAKE--LTYTCYQMYARMKTGISPEFVAFGKDSNDFTVGHNAAFYILRPETVESFFVLNQLTGDPAYREWGWEVFQSIE-RYCRTDIAYGSLTNVNNPGAAPEDRMESFFLAETIKYLYLLFDPDTEVDIVNKHVFNTEAHPMRI 516          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10583.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS40_ECTSI8.940e-16694.82alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L0M9_9PHAE6.500e-10997.09alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S1YR71_9STRA1.420e-8756.67alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii... [more]
A0A7S3XK61_HETAK3.750e-8758.26alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S1GA01_9STRA2.270e-8656.20alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2... [more]
A0A7S2PJG9_9STRA1.060e-8456.15alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi ... [more]
A0A7S2UB93_9STRA4.260e-8455.42alpha-1,2-Mannosidase n=1 Tax=Attheya septentriona... [more]
B8C1C0_THAPS4.900e-8453.91alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudo... [more]
B8C1C1_THAPS6.740e-8453.50alpha-1,2-Mannosidase n=1 Tax=Thalassiosira pseudo... [more]
A0A7S4N8K7_9STRA8.880e-8354.73alpha-1,2-Mannosidase n=1 Tax=Odontella aurita Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10583contigEcto-sp13_S_contig10583:2014..4458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size756
Hectar predicted targeting categoryother localisation
Exons5
Cds size504
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10583.542.1prot_Ecto-sp13_S_contig10583.542.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10583 3112..4458 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462539.7585824-UTR-Ecto-sp13_S_contig10583:2013..22021681462539.7585824-UTR-Ecto-sp13_S_contig10583:2013..2202Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10583 2014..2202 -
1681462539.767182-UTR-Ecto-sp13_S_contig10583:2472..25201681462539.767182-UTR-Ecto-sp13_S_contig10583:2472..2520Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10583 2473..2520 -
1681462539.7753-UTR-Ecto-sp13_S_contig10583:3098..31111681462539.7753-UTR-Ecto-sp13_S_contig10583:3098..3111Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10583 3099..3111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462539.783465-CDS-Ecto-sp13_S_contig10583:3111..33201681462539.783465-CDS-Ecto-sp13_S_contig10583:3111..3320Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10583 3112..3320 -
1681462539.7916267-CDS-Ecto-sp13_S_contig10583:3724..38831681462539.7916267-CDS-Ecto-sp13_S_contig10583:3724..3883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10583 3725..3883 -
1681462539.7999046-CDS-Ecto-sp13_S_contig10583:4322..44581681462539.7999046-CDS-Ecto-sp13_S_contig10583:4322..4458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10583 4323..4458 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10583.542.1

>prot_Ecto-sp13_S_contig10583.542.1 ID=prot_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
YLWGLGRLVLRVPVESVDAGRPSRRELPQDVRRCHGRCSGAPRPEGPRSN
VPQRVERYEAAASDGPSSVLLGGEPGPRCRDLSRLTKGSEGSEDWKGECL
SVHLLPDVPPHRHRPLSRGGGVQRSGRHEGARPGSLLHPQARDTGELLRA
ATAHRRSGVQGVGLGDL*
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mRNA from alignment at Ecto-sp13_S_contig10583:2014..4458-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10583.542.1 ID=mRNA_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10583:2014..4458- (Ectocarpus species13 EcNAP12_S_4_19m)
TACCTTTGGGGCCTTGGGAGACTCGTTTTACGAGTACCTGTTGAAAGTGT GGATGCAGGGAGGCCGTCGAGAAGAGAGCTACCGCAGGATGTACGAAGAT GCCATGGACGGTGTAGCGGAGCTCCTCGTCCAGAAGGTGCGACCGTCCGA ACCTCTCCCATCAATCTGGGGATGCCTCCCTGCCTGGCAGACAATCAAGA ACATTTGGTGCATGATTCCTGCCGCCTACAACTCGACTGCCATCCTCACC ACAAGAAGAAACTTCAACACACGCTACTGTTTTCGGTGAATCTTTCATAC CTCGACTCCAACCGGAGTTAAATTTCACCACAACGCCGTGGTCGACAACT CGTCCTTGTCCTCAGCGGGGGGAGGACCTACTATTTGCTAATAGCATACG GAGGGCCGCCTTTGCCGGCGCTGTTGAGTTATGTGTTTTGAGTTCTGTTT GTTAGAAAAGATGTTTGTCGTTGTTTCCTTTCGCTGGCGTGCTTTCTCTC GTTTCACTCACCCCTCCCCTCATCTCTCCCTACTGCACTGCTCTGTCGCA CGCCACCTGCCGTACTGGCATCCAGGCCCGCGGTCTAACGTACCTCAGCG AGTGGAACGGTACGAGGCGGCAGCATCGGATGGACCATCTAGCGTGCTTC TTGGCGGGGAACCTGGCCCTCGGTGCCGTGACCTCAGCCGACTCACGAAG GGCAGCGAGGGATCTGAGGACTGGAAAGGCGAGTGTTGTCTGAGCAATAA CGGGAGAATGGGCGACGATGACTACCAAATACAACAACAATAACAACAGC AGCAGCAACAGCAGCAGCACAAACACGCCGTTGCATGCAACGCTGAAAAA CAGAAATTGATAGCGAGTTTGCACTCTCAATAGCTTCTGAGCTAAAAGCT CATTGCCACTAGTTTCTTGAACTTCAGAGTATCGTCCATCTCTCAGAAGA CGCCGGTTGCAAGGTTCTTTGCGCGGGGTACGAGGAGGGGTTGGAGGTGA GGTTGGGTCAATTTCTCCTCCAGAACAGACCTCCTTTCGACCATCTCCCA CTCCACTTCGTCAGTGACCGCGCCATCAACTTGGGAATATTGCAGTCAGC CGACACTCTTTTTTCTTCGCCCAATATGCCAATTCCAGGCCTTAGCGTAC ACCTGTTACCAGATGTACCTCCGCACCGCCACCGGCCTCTCTCCCGAGGT GGTGGAGTTCAACGGAGCGGGAGACATGAGGGCGCGCGACCAGGCTCGCT TCTACATCCTCAGGCCCGAGACACTGGAGAGCTTCTTCGTGCTGCAACAG CTCACCGGAGATCCGGTGTACAGGGAGTGGGGTTGGGAGATCTTTAGGCA TGTAGACTATGTCTATCTACAGTACATGTTGATGTTCCTGTTTCGACAGC CCATAGTGTGAGGCGCACAACGTCGAGGTTTGGTTCGGGTGGTTGATTTT TTCGTCGTGAAGTCTTGGTTTCCTCACCGGGTATCGATGTGGTAGGCTCA TACTTAACGTTTTTCGTGTCTACTGCTCTTAGGGACGATCCTGCTGAGCG CAGGCTGAGATTGCTGAAGGGTTCTACGGCCTTACACACTGACTGGCATT GGTTGCCGTTCAACCATTTATATGGAGGAAAAAGAGTAAAACAGAGTTGC TTGGTACCGAGAAGCTTCTAGCACCACCGAGAACGTTCGAACATTGCTAC TGCATTGCTACCACCAGAACTAAGAGAGACCACGTGCTATCTCGAAGGTG TGCATTGTCAACGTCTTCCCCCCGACCAAGATATTTCCAAGCAAATAATT GCGTTTTTTCCTCTGATGACGATCTTCTAAGCGTTGACATGAAAAACGCT GACGTCCCCCACCCGTTGGTTTGTGTGTGCTTCACATCGTGTGGATATTG CCGGCGATCGCTGTTTTCACTCGTCAAGGGCAATCGAGAGACATTGCCGG ATCGGAGTGGCATACGGTTCTCATCCAGACGTAGAGGTGAGGACGTGTAA CAGCGGAAGCAGCAGCAGTTACCGCAAACTAGCTAAAGAAAATGTAAAGT GCACCTGGTACTAAGGGGACACTTGCGTTGTCGCCATGCGTTCTGGCAAC AACGGACCGACTCGAGGGCATATCTAGGGTGAACATAGAAGCAGAGTTCT GCTTCGTCTGATCATGGAGGCGTGTCCTCCGAACGAACAATTTTTTCCCC TCCCCCCTCCCCCGCGCGATCCCTTGTGTACATGCATTTGTTCGGTGTCC TTGAAGAACCCTGGGCTCAAGGCGAAGGACCACATGGAGTCGTTCTTTCC GGGAGAGACCCTCAAGTACCTCTACCTCCTCATGCAGCCAGACCATCCCA TCGATCTCATGGAGTATACCCTTAACACGGAGGCCCACCCGCTCAAGATC TTCGCGTTCGATGACGCCGCAGCCAGTCGTAGCCAAATCCTTGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10583:2014..4458-

>mRNA_Ecto-sp13_S_contig10583.542.1 ID=mRNA_Ecto-sp13_S_contig10583.542.1|Name=mRNA_Ecto-sp13_S_contig10583.542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10583:2014..4458- (Ectocarpus species13 EcNAP12_S_4_19m)
TACCTTTGGGGCCTTGGGAGACTCGTTTTACGAGTACCTGTTGAAAGTGT
GGATGCAGGGAGGCCGTCGAGAAGAGAGCTACCGCAGGATGTACGAAGAT
GCCATGGACGGTGTAGCGGAGCTCCTCGTCCAGAAGGCCCGCGGTCTAAC
GTACCTCAGCGAGTGGAACGGTACGAGGCGGCAGCATCGGATGGACCATC
TAGCGTGCTTCTTGGCGGGGAACCTGGCCCTCGGTGCCGTGACCTCAGCC
GACTCACGAAGGGCAGCGAGGGATCTGAGGACTGGAAAGGCGAGTGCCTT
AGCGTACACCTGTTACCAGATGTACCTCCGCACCGCCACCGGCCTCTCTC
CCGAGGTGGTGGAGTTCAACGGAGCGGGAGACATGAGGGCGCGCGACCAG
GCTCGCTTCTACATCCTCAGGCCCGAGACACTGGAGAGCTTCTTCGTGCT
GCAACAGCTCACCGGAGATCCGGTGTACAGGGAGTGGGGTTGGGAGATCT
TTAG
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