mRNA_Ecto-sp13_S_contig10582.541.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 292 bits (748), Expect = 2.220e-94 Identity = 139/158 (87.97%), Postives = 148/158 (93.67%), Query Frame = -1
Query: 1 TTPQILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 474
TTPQILIAEV D GS NGTL ATYKSDFPG+YLVY+DEVE S+K EG+PILGSPFSLTIAGDAPTLDVNSLPVCS+H+DAN +IADTFWR GTWLSS+VAS AHGV+RNGWVFQPKSCVFDTFSYEDLMLLASLD EPTWLLVLGGSVQRGVFLTLID
Sbjct: 10 TTPQILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLID 167
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 291 bits (746), Expect = 3.390e-94 Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
QILIAEVVDGGS NGTL ATYKSDFPG+YLVY+DEVE S+K EG+PILGSPFSLTIAGDAPTLD+NSLPVCS+HEDAN IADTFWR GTWLSSNVAS AHGV+RNGWVFQPKSCVFDTFSYEDLMLLASLD EPTWLLVLGGSVQRGVFLTL+D
Sbjct: 109 QILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVD 263
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.860e-92 Identity = 136/155 (87.74%), Postives = 143/155 (92.26%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
+ILIAEV DGGS NGTL ATYKSDFPG+YLVY+DEVE S+K EG+PILGSPFSLTIAGDAPTLDVNSLPVCS+HED N I DTFWR GTWLSSNVAS AHGV+RNGWVFQPKSCVFDTFSYEDLMLLASLD EPTWLLVLGGSVQRGVFLTLID
Sbjct: 92 EILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLID 246
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 275 bits (704), Expect = 5.920e-87 Identity = 127/159 (79.87%), Postives = 145/159 (91.19%), Query Frame = -1
Query: 1 CTTPQILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 477
C+ QILIAEVV GS+NGTL ATY+SDFPG+YLV+V+EV+PS++ EGLPI+GSPFSLTI GD PTLDV+SLPVC S +D +N IADTFWRPGTWLSSNVAS AHGV+RNGWVFQPKSCVFDTFSY+DLMLLASLD EPTWL+V+GGSVQRGVFLTL+D
Sbjct: 35 CSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVD 193
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 275 bits (703), Expect = 6.150e-87 Identity = 131/155 (84.52%), Postives = 142/155 (91.61%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
QIL AEVVDGG +GTL ATYKSDFPGNY V+++EV+ S+K EG+PILGSPFSLTIAGDAPTL+VNSLPVCSS EDAN IADTFWRPGTWLSSNVAS AHGV+RNGWVFQPKSCVFDTFSYEDLMLLAS+ EPTWLLVLGGSV+RGVFLTLID
Sbjct: 116 QILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKKGEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLID 270
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 270 bits (690), Expect = 8.140e-86 Identity = 128/155 (82.58%), Postives = 141/155 (90.97%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
QILIAE+V G + GTL ATYKSDFPG+YLVYV+EV+PSE+ EGLPI+GSPFSL IAGD PTLDVNSLPVC S ED +N IADTFWRPGTWLSSNVAS AHGV+RNGWVFQPKSCVFDTFSY+DLMLLASLD EPTWL+V+GGSVQRGVFLTL+D
Sbjct: 129 QILIAEIV-GDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQGEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVD 282
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 265 bits (678), Expect = 7.080e-84 Identity = 124/155 (80.00%), Postives = 140/155 (90.32%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
QILIAEVV GS+NGTL ATYKSDFPG+YLV+V+EV+PSE+ EGLPI+GSPFSL IAGD PTLDV+SLPVC S +D + IADTFWRPGTWLS+NVAS AHGV+R GWVFQPKSCVFDTFSY+DLMLLAS D EPTWL+V+GGSVQRGVFLTL+D
Sbjct: 54 QILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVD 208
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 206 bits (524), Expect = 3.020e-62 Identity = 108/155 (69.68%), Postives = 109/155 (70.32%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
QILIAEVVD GS NGTL ATYKSDFPG Y VY+DEVE S K DANN IADTFWRPGTWLSSNVAS AHGVLRNGWVFQP SCV DTFSYEDLMLLASLD EPTWLLVLGGSVQRGVFLTLID
Sbjct: 49 QILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRK----------------------------------DANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLID 169
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 175 bits (443), Expect = 8.180e-50 Identity = 92/170 (54.12%), Postives = 118/170 (69.41%), Query Frame = -1
Query: 1 TTPQILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEV------------EPSEKSEGLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 474
+T +L A VVD G +GTL ATY+S +PG+YLV+V +V P E+++ I+ SPF LTI+G+ +DV+ LP+C + E DTFWR G+W+SS AS HGVLR+GWVFQPK+CV DTFSY+DLMLLA+ EPTWLL+LG SVQRGVFLTL+D
Sbjct: 13 STDHVLHAAVVDNG--DGTLTATYESPYPGDYLVHVQDVCTDMSVVGRGKKRPGERAKA--IVDSPFRLTISGEI-AVDVDDLPLCDA-EHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVD 176
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 178 bits (451), Expect = 9.460e-50 Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = -1
Query: 1 QILIAEVVDGGSDNGTLIATYKSDFPGNYLVYVDEVEPSEKSE---GLPILGSPFSLTIAGDAPTLDVNSLPVCSSHEDANNHIADTFWRPGTWLSSNVASTAHGVLRNGWVFQPKSCVFDTFSYEDLMLLASLDNEPTWLLVLGGSVQRGVFLTLID 465
+ +A V + G NGTL A Y+S FPG+YLV+V++V + G PI+GSPFSLT++GD P +DV++LPVC E +A ++WR G+W+SSN+A+ HGVLR+GWVFQPK+CV++ FSY+DLMLLA LD EP WLL LG S+ RG+FLT++D
Sbjct: 131 NVFVAGVRNNG--NGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGG-EGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPAWLLALGNSILRGIFLTILD 283 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10582.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10582.541.1 >prot_Ecto-sp13_S_contig10582.541.1 ID=prot_Ecto-sp13_S_contig10582.541.1|Name=mRNA_Ecto-sp13_S_contig10582.541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp VYQGQKHAPLDRTPQHQKPCRLVVQAGKEHEILVRKRVENTRFRLKHPPVback to top mRNA from alignment at Ecto-sp13_S_contig10582:2850..3332+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10582.541.1 ID=mRNA_Ecto-sp13_S_contig10582.541.1|Name=mRNA_Ecto-sp13_S_contig10582.541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10582:2850..3332+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10582:2850..3332+ >mRNA_Ecto-sp13_S_contig10582.541.1 ID=mRNA_Ecto-sp13_S_contig10582.541.1|Name=mRNA_Ecto-sp13_S_contig10582.541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10582:2850..3332+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |