mRNA_Ecto-sp13_S_contig1058.538.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A6H5KHM1_9PHAE (HAMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHM1_9PHAE) HSP 1 Score: 1066 bits (2758), Expect = 0.000e+0 Identity = 569/621 (91.63%), Postives = 589/621 (94.85%), Query Frame = 1
Query: 1 MSSRAATAACKPCLNKKYPLRKQLLLSFLALAAVSLLLALGVVMGTTAYIGNKAESEARDSLEAQIERHLRDASAEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLILAGGGEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVPVDLSRSVWYYADAESYTVEVPA-DEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGTSPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWDRNTAENVTTVCDLGNGICSGDEGDSWEDLLLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIRESTTEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSVAATWGGRRDGSSGAGGSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAKEFQLMITGLGRRGAAAEATGLAEASAYPKNPFTTEYIRPPPTNPTAPDATPGRPSAPEQAS 1860
MSS AATAACKPCLNKKYPLRKQLLLS L+LAAVSLLLALGVVMGTTAYIG+KAESEARDSLEAQIERHLRDAS EAAATIGERFRKIQYGVLDVTAFALRDAFQEDL+LAGG EGYPLSPAHTDLRDIEITESSEANLVGFSRQDV VDLSRSVWYYADAES TVEV A ++QLKINQSARLDLLWPAMYINSNDTKGILLG ELS T Q+FRYFPGTDLSAVEGSAFACE+V+++GTSPCY+P ERDWY AD AV DSET LG AIVTPPYTDAVGSENDWLVTLARAVY NSGTTSGSLLGVVGVD+RLEQVQESVE INFLETGYSILATA+EGVVLAAGAAWDR+TAEN+T VCDLGNGICSGDEGDSWEDLLLET NGGIKTFKAVSTTGXXXXXX IAAPI TTFGTAVSGGEG VTHYILSAVPRDEIFQPVDGMADLIRESTTEI+VTTAIVAC TLVAVALSVYFLAGSITRPIVKMT AARSI+KDGAKTDVFGSVAATWGGRRDGSSGAG SIDSRTAGRYTMNRTACLDYLLCRGDDEISTLA+EFQLMITGLGRRGAAAEATGLAEAS YPKNPFTT++IRPPPTNPTAPDATPGRPSAP QAS
Sbjct: 1 MSSHAATAACKPCLNKKYPLRKQLLLSSLSLAAVSLLLALGVVMGTTAYIGDKAESEARDSLEAQIERHLRDASVEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLVLAGGEEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVLVDLSRSVWYYADAESNTVEVSAAEDQLKINQSARLDLLWPAMYINSNDTKGILLGVELSTTNQMFRYFPGTDLSAVEGSAFACEDVQEDGTSPCYDPTERDWYELADAAVMDSETFLGGAIVTPPYTDAVGSENDWLVTLARAVYRNSGTTSGSLLGVVGVDMRLEQVQESVEGINFLETGYSILATADEGVVLAAGAAWDRDTAENITKVCDLGNGICSGDEGDSWEDLLLETKNGGIKTFKAVSTTGXXXXXXXXXIAAPITTTFGTAVSGGEGKVTHYILSAVPRDEIFQPVDGMADLIRESTTEIMVTTAIVACSTLVAVALSVYFLAGSITRPIVKMTSAARSISKDGAKTDVFGSVAATWGGRRDGSSGAGDSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAREFQLMITGLGRRGAAAEATGLAEASVYPKNPFTTDFIRPPPTNPTAPDATPGRPSAPGQAS 621
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: D8LT17_ECTSI (Methyl-accepting chemotaxis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT17_ECTSI) HSP 1 Score: 794 bits (2051), Expect = 1.480e-276 Identity = 428/605 (70.74%), Postives = 489/605 (80.83%), Query Frame = 1
Query: 16 ATAACKPCLNKKYPLRKQLLLSFLALAAVSLLLALGVVMGTTAYIGNKAESEARDSLEAQIERHLRDASAEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLILAGGGEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVPVDLSRSVWYYADAESYTVEVPADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGT-SPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWDRNTAENVTTVCDLGNGICSGDEGDSWEDLLLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIRESTTEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSVAATWGGRRDGS--SGAGGSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAKEFQLMITGLGRRGAAAEATGLA-EASAYPKNPFTTEYI-RPPPTNPTA 1815
A + CKPCLNKKYPLR QLLLSFLALAAVSLLLAL VVMGTTA+IG+KA+SEARDSLE QI+RHL +AS E+A + E FR +QYGVLDVTAFALRDA QE+L+L GG EGYPL+PAHTDLRD EI S+EANL FSR VDLSRS WYYADAESYTVEVP DE I Q+ARLDLLWPA+YINS DTKG+ +G ELS TG+ RYFPGTDLS VEGS FACE VE++G+ +PC++P R WY A++A DS TSLG AI++ PY DA+ +++WL++LARAVYS+SG+T G+LLGVVG+DVRLEQVQESVE INFL TGYSILATA +G+VLAAG WD++ E TVC +GNGICSG +GD W DLL E NGGIK+F + ST G IL+AAP+ F TA SGG GTVTHYILSAVPR+EIF+PV GMAD IR+ST +IIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMT AARSIA DGAKTDVFGSV ATWG RRD + S G ID T GR+T+NRTACLDYLLCRGDDEISTL +EF LMITGLGRRG+AAEATGL E + YPKNP+ + RPPPT P+A
Sbjct: 5 AVSLCKPCLNKKYPLRTQLLLSFLALAAVSLLLALAVVMGTTAFIGDKAKSEARDSLENQIKRHLTNASEESATAVREWFRNLQYGVLDVTAFALRDARQENLVLDGGNEGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYQGAEDAAVDSGTSLGAAIISDPYKDAI--DDEWLLSLARAVYSDSGSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATA-DGIVLAAGV-WDKDATEEAPTVCAIGNGICSGSDGDEWVDLLAEIENGGIKSFTSTSTAGVDEEW--ILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADSIRDSTVQIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVMATWGARRDSARDSADGRGIDVSTPGRFTVNRTACLDYLLCRGDDEISTLGREFSLMITGLGRRGSAAEATGLMDERAGYPKNPYAATIVKRPPPTGPSA 603
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: D8LT16_ECTSI (HAMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT16_ECTSI) HSP 1 Score: 744 bits (1921), Expect = 4.550e-257 Identity = 405/585 (69.23%), Postives = 465/585 (79.49%), Query Frame = 1
Query: 28 CKPCLNKKYPLRKQLLLSFLALAAVSLLLALGVVMGTTAYIGNKAESEARDSLEAQIERHLRDASAEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLILAGGGEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVPVDLSRSVWYYADAESYTVEVPADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGT-SPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWDRNTAENVTTVCDLGNGICSGDEGDSWEDLLLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIRESTTEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSVAATWGGRRDGSSGAGGSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAKEFQLMITGLGRRGAAAEATGLAEASA-YPKNPFT 1776
CKPCLN+ YPLRKQLLLSFLA A SLLLAL VV+GTTA+IG+KA AR SLE QI+RHL +AS EAA TIG RFRK+QYGVLDVTAFALRD QEDL+LAGG EGYPL+PAHTDLRD EI S+EANL F+R + VDLSRS WYYADAESYTVEVP DE I Q+ARLDLLWPA+YINS +TKG+ +G ELS TG+ FRYFPGTDLS VEGS FACE VE++G+ +PC++P R WY +A++ DSET LG AI+T P+ A+ ++DWLV LARAVYSNSGTTSGSLLGVVG+DVRLE+VQESVEAINFL+TGYSILATA+EGVVLAAG WD + +E TVCDLG GICSG +GD W DL+ +T NG +K+F + ST G IL+AAP+ TF TA+SGG GTVTHYILSAVPR+EIF+ V GM D+I +ST +II+ TAIVAC TLVAVALSVYFLAGSI RPIVKMTKAARSI DGA+TDVFGSVAA WG ++D + G GG GR+ LDYLLCRGDDEISTL +EFQLMITGLG+RG AAEA GL E A YP NPFT
Sbjct: 9 CKPCLNQAYPLRKQLLLSFLAFATASLLLALAVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGDEGYPLTPAHTDLRDTEIATSAEANLQNFTRMNFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYETKGVYVGVELSTTGRTFRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYETAEDEDYDSETFLGPAIITDPFKGAI--DDDWLVALARAVYSNSGTTSGSLLGVVGMDVRLEEVQESVEAINFLDTGYSILATADEGVVLAAGV-WDEDASEEAPTVCDLGIGICSGRDGDGWTDLIADTENGEVKSFTSKSTDGVDEEW--ILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFETVVGMVDVIWDSTIQIIIPTAIVACCTLVAVALSVYFLAGSIVRPIVKMTKAARSITADGAETDVFGSVAADWGIKKDSARGVGG-------GRF-------LDYLLCRGDDEISTLGREFQLMITGLGKRGLAAEAIGLMEERAGYPMNPFT 574
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A6H5KHM8_9PHAE (HAMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHM8_9PHAE) HSP 1 Score: 627 bits (1618), Expect = 3.040e-211 Identity = 375/618 (60.68%), Postives = 429/618 (69.42%), Query Frame = 1
Query: 130 MGTTAYIGNKAESEARDSLEAQIERHLRDASAEAAATIGERFRKIQYGVLDVTAFALRDAFQE-------------------------DLILAGGGEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVPVDLSRSVWYYADAESYTVEVPADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGT-SPCYNPIERDWYTS-----------ADEAVE---DSETSLG----------EAIVTPPYTDAVGSENDWLVTLARAVYSN-SGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWDRNTAENVTTVCDLGNGICSGD-EGDSWEDLLLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIRESTTEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSVAATWGGRRDGS--SGAGGSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAKEFQLMITGLGRRGAAAEATGLAEA-SAYPKNPFTTEYI-RPPPTNPTA 1815
MGTTA+IG+KA+SEARDSLE QI+RHL AS E+A I E FR +QYGVLDVT FALRDA QE DL+L G EGYPL+ AHTDLRD EI S+EANL FSR VDLSRS WYYADAES TVEVP DE I Q+ARLDLLWP +YINS DTKG+ +G ELS TG+ RYFPGTDLS VEGS FACE VE++G+ +PC++P R WY A+ AV+ + +T+L E P YT A E + + + +SN S +T G+LLGVVG+DVRLEQVQESVE INFL TGYSILATA +G+VLAAG WDR+ E G G GD +GD W DLL E NGGIK F + ST G IL+AAP+ F TA SGG GTVTHYILSAVPR+EIF+PV GMADLIR+ST +IIVTTAIVACFT+VAVALSVYFLAGSITRPIVKMT AARSIA DGAKTDVFGSV ATWG RRD + S G D T GR+T+NRTACLDYLLCRGDDEISTL +EFQLMITGLGRRG+AAEATGL + + YPKNP+ + RPPPT P+A
Sbjct: 1 MGTTAFIGDKAKSEARDSLENQIKRHLTIASEESATAIREWFRNLQYGVLDVTTFALRDARQEKRPSIDTLLPAKGPTFHVIRRREPQDLVLDSGNEGYPLNLAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEDEMTTITQTARLDLLWPTVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYAVESGLKGPKAIYANLAVDGGVNKKTALTAPRRIAPINCENFEKPVYTQASSKEQGFEADVHK--FSNDSDSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATA-DGIVLAAGV-WDRDGTEKAPE----GKGRTLGDSDGDEWVDLLAEIENGGIKRFTSTSTAGVDEEW--ILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADLIRDSTVQIIVTTAIVACFTMVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVTATWGARRDSARDSARGCGTDISTPGRFTVNRTACLDYLLCRGDDEISTLGREFQLMITGLGRRGSAAEATGLMDKRTGYPKNPYAAMIVKRPPPTGPSA 608
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A6H5JHX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX1_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 6.420e-143 Identity = 267/453 (58.94%), Postives = 319/453 (70.42%), Query Frame = 1
Query: 469 YYADAESYTVEVPADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGT-SPCYNPI----ERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWDRNTAENVTTVCDLGNGICSGDEGDSWEDLLLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIREST----------------TEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSVAATWGGRRDGSSGAGGSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAKEFQLMITGLGRRGAAAEATGLAEA-SAYP 1761
Y ADAES TVEVP DE I Q+ARLDLLWPA+YI S +TKG +G ELS TG+ +RYFPGTDLS V+GS FACE VE +G+ +PC++P ER WY +A++ DSET L AI+T P+ ++ ++DWLV LARAVYS LLGVVG+DVRL Q+QESVEAINFL+TGYSILATA+EGVVLAA A WD + ++ TVCDL GI SG +GD W DL +T NG +K+F + T IL+AAP+ TF TA+SGG GTV HYILSAVPR+EIF+PV GM LI +ST +II+ TAIVAC TLVAVAL+VYFLAGSITRPIVKMTKAARS DGA+ DVFGSVAA G ++D GAGG+ R+ LDYLLCRGDDEISTL +EFQLMITGLG+RG+AAEA G+ E + YP
Sbjct: 8 YNADAESNTVEVPEDEMAAITQTARLDLLWPAVYITSYETKGAYVGVELSTTGRTYRYFPGTDLSGVKGSRFACEYVEVDGSIAPCFDPTVPPWER-WYETAEDPDYDSETFLAPAIITDPFKGSI--DDDWLVALARAVYS--------LLGVVGMDVRLGQLQESVEAINFLDTGYSILATADEGVVLAA-AEWDEDASQEALTVCDLRIGISSGRDGDGWTDLKADTENGEVKSFTSSPPTASTEW---ILVAAPVEGTFDTAISGGAGTVAHYILSAVPRNEIFEPVVGMMGLIWDSTIQEFHVHLLSLFSSLHVQIIIPTAIVACCTLVAVALAVYFLAGSITRPIVKMTKAARSTTADGAEHDVFGSVAADRGIKKDSVRGAGGA-------RF-------LDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGVMEEHTGYP 431
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A3M1VNS1_9EURY (HAMP domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1VNS1_9EURY) HSP 1 Score: 66.2 bits (160), Expect = 1.910e-7 Identity = 89/345 (25.80%), Postives = 149/345 (43.19%), Query Frame = 1
Query: 508 ADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGTSPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATANEGVVLAAGAAWD---RNTAENVTTVCDLGNGICSGDEGDSWEDL--LLETANGGIKTFKAVSTTGXXXXXXSILIAAPIMTTFGTAVSGGEGTVTHYILSAVPRDEIFQPVDGMADLIRESTTEIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTKAARSIAKDGAKTDVFGSV 1527
AD I +SA LDL++ ++ + + + + + VFR FPG + ++++E YNP DWY A +A G + +PPY D +V+L +AVY G+L+GVVG+D ++ +++ V +N L+ GY+ L E L A WD + + + T+ D I G S E+L L NG I+ K + G I A + F V E +L++V R + + + S + I ++ V L +L+ ++T+PI K+T+AA+ I + K D+F +V
Sbjct: 141 ADMNQTIQRSAYLDLVFRPIHEQNREYVWLYVAF----SNGVFRNFPGGFV-----------DLKRE-----YNPPLEDWYIEAVQA-------RGAVVYSPPYFDIT---QGLVVSLTQAVY-----VEGNLIGVVGLDFKITTIRDKVLKVNILDQGYASLFQ-KEDFTLLAHPEWDAENHDINQELPTINDFETNI-DGSPALSIENLQELKNKTNGTIEFEK--NGEGFILTFSQISTAQGPLYDFAVVVKVAE------VLASVAR------IQNDMNQKQSSLQRNLFLFFIFITLAILGVGL---YLSNAVTKPIGKLTQAAKQITLNATKEDLFENV 431
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A7C7RYC4_9CHLR (HAMP domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7RYC4_9CHLR) HSP 1 Score: 64.7 bits (156), Expect = 6.030e-7 Identity = 78/315 (24.76%), Postives = 127/315 (40.32%), Query Frame = 1
Query: 58 LRKQLLLSFLALAAVSLLLALGVVMGTTAYIGNKAESEARDSLEAQIERHLRDASAEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLILAGGGEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVPVDLSRSVWYYADAESYTVEVPADEQLK--INQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGTSPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSIL 996
+R +LL+ L++ +S+L + + + +G +A+ + D+L AQ E +LR + A ++Q V +A R F GG P + VG Q + + S + D V DE+L + SA ++L+ P +Y + +T + L A+ +V Y+P +L A+ P + +R WY A A + +P Y DA G +VT A VY T G +GVVG+DV L+ + S+E L +GYS L
Sbjct: 17 IRTRLLILLLSMTTISVLAVGYLGINSVQSMGEQAQRISADALRAQAEEYLRQVTEGDARRNDLILERVQRDAEKVAQYAAR-VFGNPDAFVGGAYWRP----------------EDHMFVGPDGQFMNDETDVSSIFVPDF------VEIDEELLEVLEMSAHMNLILPPVYDSDPNTVAVYLAAKQ----EVTCYYPNINLGAI--------------VPPDFQVTQRPWYVGAAPANNPERR----VVWSPVYADATG--KGLMVTAAAPVY----TDRGEFVGVVGIDVTLQDISASIEENRLLGSGYSFL 280
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A7C3JDF0_9CHLR (HAMP domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3JDF0_9CHLR) HSP 1 Score: 61.2 bits (147), Expect = 1.050e-5 Identity = 47/168 (27.98%), Postives = 74/168 (44.05%), Query Frame = 1
Query: 493 TVEVPADEQLKINQSARLDLLWPAMYINSNDTKGILLGAELSPTGQVFRYFPGTDLSAVEGSAFACEEVEKEGTSPCYNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSIL 996
T + + + I A LDL PA+ + D + E +V RY+P +L AV P + +R WY + S +G + PY DA G + T A+AV +G LLGV+G+DV L ++ +VE+++ L TGY+ +
Sbjct: 137 TTSLDENARRDIELGAYLDLAMPAIMERNPDVVALYYATE----NEVTRYYPNINLGAV--------------LPPDFTVTQRPWYLGST-----SPQKIGSPYWSSPYVDATG--KGLVTTAAQAVVDRNG----KLLGVIGIDVTLNNLKSAVESMSVLGTGYTFM 275
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Match: A0A556PMR8_9BACI (Methyl-accepting chemotaxis protein n=2 Tax=Allobacillus TaxID=1400133 RepID=A0A556PMR8_9BACI) HSP 1 Score: 58.9 bits (141), Expect = 4.890e-5 Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 724 YNPIERDWYTSADEAVEDSETSLGEAIVTPPYTDAVGSENDWLVTLARAVYSNSGTTSGSLLGVVGVDVRLEQVQESVEAINFLETGYSILATAN 1008
Y+P ERDWY A E S GE IVTPPY DA +EN +VT+A+A SG VVG+DV+LE+++ + E GY IL N
Sbjct: 135 YDPTERDWYIQAME-------SPGEVIVTPPYQDA-DTEN-MVVTVAQATNDQSG--------VVGIDVKLEELETLANTMQIGEEGYVILIDQN 212 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1058.538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1058.538.1 >prot_Ecto-sp13_S_contig1058.538.1 ID=prot_Ecto-sp13_S_contig1058.538.1|Name=mRNA_Ecto-sp13_S_contig1058.538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=621bp MSSRAATAACKPCLNKKYPLRKQLLLSFLALAAVSLLLALGVVMGTTAYIback to top mRNA from alignment at Ecto-sp13_S_contig1058:29..9677- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1058.538.1 ID=mRNA_Ecto-sp13_S_contig1058.538.1|Name=mRNA_Ecto-sp13_S_contig1058.538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1058:29..9677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1058:29..9677- >mRNA_Ecto-sp13_S_contig1058.538.1 ID=mRNA_Ecto-sp13_S_contig1058.538.1|Name=mRNA_Ecto-sp13_S_contig1058.538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1058:29..9677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |