mRNA_Ecto-sp13_S_contig10573.533.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: D8LB24_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB24_ECTSI) HSP 1 Score: 727 bits (1877), Expect = 3.240e-264 Identity = 372/387 (96.12%), Postives = 375/387 (96.90%), Query Frame = 1
Query: 1 MKITAALVSALLLPASSFAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASPDAAGVGVGXXXXSSLRGSAAEASAIGVGGKKTGKFRRFLSSLLTCSCLSSRRAARDDDEPAAGEFTTITDPTSAHKGAAHPQGAMETGGGGVGGSSGWQQGTPVPDVGVGLGSETVSGARGGGGTHARRGRPQQQSGLAAHNANKGRGVGWTRTR 1161
MKITAALVSALLLPAS FAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASPDAAGVGVG SSLRGSAAEASAIGVGGKK GKFRRFLSSLLTCSCLSSRRA R+DDEPAAG+ TTITDPTSAHKGAAHPQGAMETGGGGVGG+SGWQQGTP PDV VGLGSETVSGARGGGGTHARRG PQQQSGLAAHNA KGRGVGWTRTR
Sbjct: 1 MKITAALVSALLLPASCFAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASPDAAGVGVGGGGASSLRGSAAEASAIGVGGKKPGKFRRFLSSLLTCSCLSSRRAVREDDEPAAGDVTTITDPTSAHKGAAHPQGAMETGGGGVGGASGWQQGTPAPDVVVGLGSETVSGARGGGGTHARRGWPQQQSGLAAHNAKKGRGVGWTRTR 387
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A835YZQ7_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ7_9STRA) HSP 1 Score: 306 bits (784), Expect = 1.680e-98 Identity = 150/223 (67.26%), Postives = 181/223 (81.17%), Query Frame = 1
Query: 46 SSFAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASN-GVSFCFRRMACFGSPSFDDK-QAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASPDAAG 708
+S AGL+++WRHSA+I+RDGFLT++F V+G+ M VRQVPGDGNCLFH+ISACL+HA +HPSL L++L+PKSA LRK+AVDYLV + + LYLE E+VPV ELL+VVA QYNMT + YC+ MR +VWGGGPEIVALSN L RPIHVYELA+ G FCFRRMACFGSP FD + + IHILSAD+RFPNL PG+QLANGNHFL LFPC + A +A G
Sbjct: 18 TSHAGLNAMWRHSAQIQRDGFLTEAFPVEGLPVQMQVRQVPGDGNCLFHSISACLEHADTSSHPSLHLNDLLPKSAVLRKMAVDYLVADPDRVLYLEGGETVPVNELLTVVATQYNMTVDAYCKHMRLPAVWGGGPEIVALSNCLRRPIHVYELAAGAGRRFCFRRMACFGSPLFDGECEPIHILSADARFPNLAPGQQLANGNHFLCLFPCAPSDALSEACG 240
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A7S3L1U5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1U5_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.250e-65 Identity = 118/224 (52.68%), Postives = 142/224 (63.39%), Query Frame = 1
Query: 73 WRHSAKIKRDGFLTDSF--------------AVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLD--LSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELA--------SNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
W S I+ DGFL D F Q + T +RQVPGDGNCLFH+IS CL HA NGTH + L +L S LR+ AVD L K+ L+L+ E++ EL+ A QY +T+E YC+ M Q VWGGGPEIVALSN L RPIHVYELA S+G +F RRMACFGSP FD ++A+HILSADSRFP+L PG QL+ GNHFLA+FP
Sbjct: 18 WNTSPHIRYDGFLRDEFRRIPGEWEEEVRLRTRQRLETKCRIRQVPGDGNCLFHSISLCLQHATNGTHWDVSKCLEDLYTHSQTLRQQAVDCLRQPHKR-LFLQGRETLKSGELVQAAAQQYGLTSEEYCQAMEQDCVWGGGPEIVALSNLLQRPIHVYELATSSSSSKPSSGNTFVLRRMACFGSPRFDRREALHILSADSRFPDLLPGEQLSAGNHFLAVFP 240
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: B7G567_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G567_PHATC) HSP 1 Score: 209 bits (531), Expect = 7.780e-61 Identity = 107/189 (56.61%), Postives = 131/189 (69.31%), Query Frame = 1
Query: 154 VRQVPGDGNCLFHAISACLDHACNGTHPSLDLSE------LMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV----------SFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
+RQVPGDGNCLFH+IS CL +A NGTH L+ S+ L S LR+ AV+ L + ++ L+L+ ES+ +EL+ A QYN++ E YC M+Q SVWGGGPEIVAL N L RPIHVYELAS SF RRMACFGSP FD +Q +HILSADSRFP++ PG+QLA+GNHFLALFP
Sbjct: 93 IRQVPGDGNCLFHSISLCLQYAANGTHWDLNTSDRRGLDALYEHSQTLRRKAVEVL-QHSQRRLFLQGRESLRAHELVQAAAQQYNLSPEEYCASMQQDSVWGGGPEIVALCNVLQRPIHVYELASTTTRSSRNDDERQSFVLRRMACFGSPKFDRRQPLHILSADSRFPDVTPGQQLASGNHFLALFP 280
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A1Z5JTL4_FISSO (OTU domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTL4_FISSO) HSP 1 Score: 203 bits (516), Expect = 7.550e-59 Identity = 113/228 (49.56%), Postives = 139/228 (60.96%), Query Frame = 1
Query: 73 WRHSAKIKRDGFLTDSF--------------AVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLD--LSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELA--SNGV----------SFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
W SA I GFL F V + +RQVPGDGNCLFH++S CL HA NGTH + L EL S +LR AV L N K+ L+L+ +ES+ EL++ A QY++T E YC M + VWGGGPEIVALSN L RPIHVYELA S G +F +RMACFGSP FD K+A+HILSADSRFP+++PG Q+ GNHFL++FP
Sbjct: 49 WNPSALIDEKGFLKGLFRRKKGDWEEEFPMRTVYHTNHPCQIRQVPGDGNCLFHSLSLCLQHAVNGTHWDMPNRLDELYEHSRSLRAKAVACLRQN-KRKLFLQGKESMRAIELVTSAAQQYDLTPEEYCATMEEDCVWGGGPEIVALSNILQRPIHVYELAMESPGAEDATDQPKKPTFILKRMACFGSPRFDGKRALHILSADSRFPDIQPGEQMVAGNHFLSVFP 275
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A7S1V4T9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4T9_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.500e-58 Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 1
Query: 154 VRQVPGDGNCLFHAISACLDHACNGTH-PSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELAS---NGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
VRQVPGDGNCLFHA+S CL + +G H P DL +L S +LR+ AVDY+ ++ L+L+ E + +L+ AAQY +T + Y E MRQ S WGGGPEIVALSN L RPIHVYEL + N F RRM CFGSP FD ++A+HILSADSRFP+++PG+Q GNHFLA+FP
Sbjct: 1 VRQVPGDGNCLFHALSVCLYKSEHGCHFPFGDLGKLQQCSKSLRQRAVDYVKKKPRRLLFLQAREFLRAKDLIDSSAAQYGVTGDEYLETMRQDSTWGGGPEIVALSNMLRRPIHVYELYAPNRNVQDFRLRRMCCFGSPKFDRQEALHILSADSRFPDVQPGKQKKEGNHFLAIFP 177
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A6U9WPR4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9WPR4_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.100e-54 Identity = 116/264 (43.94%), Postives = 141/264 (53.41%), Query Frame = 1
Query: 49 SFAGLSSIWRHSAKIKRDGFLTDSF-AVQG-------------ISTNMA---VRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMP----KSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELA---------------------------------SNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCP 678
S G W S I +GFL + V G IS + + +RQVPGDGNCLFH+IS HA NGTH + + M SA LR++AVD L + +K L+L+ E + +L+ AAQY +T YC++MRQ S WGGGPEIVAL N L RPIHVYEL S SF RRMACFGSP FD A+HILSADSRFP+L+PG QL +GNHFLA+FP P
Sbjct: 49 SMCGHYPPWNPSPNIDENGFLVPKYNRVSGEWEKEVKLRKKDRISLHNSPAMIRQVPGDGNCLFHSISVAWAHATNGTHLEMKSPDTMEWLYRTSANLRQLAVDCLEER-RKLLFLQGHEHLKATDLVEAAAAQYGITGSEYCDLMRQESYWGGGPEIVALCNVLQRPIHVYELHVPEDDNDDDKQRHSRKGKMRSYYRKGYSLSSADSPHSSFVLRRMACFGSPKFDRSPALHILSADSRFPDLRPGEQLESGNHFLAIFPEP 311
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: A0A7S2PB71_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB71_9STRA) HSP 1 Score: 192 bits (488), Expect = 7.680e-54 Identity = 101/188 (53.72%), Postives = 124/188 (65.96%), Query Frame = 1
Query: 154 VRQVPGDGNCLFHAISACLDHACNGTHPSLDLSE----LMPKSAALRKVAVDYLVDNLKK---TLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELA--------SNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
VRQVPGDGNCLFH++S CL +A +H L + E L +S LR AV L + +K L+++ +E + ELLS A+QYN++ E YCE M Q WGGGPEIVAL NAL RPIHVYEL+ SN F RMACFGSP FD ++ +HILSADSRFP++ PGRQ +GNHFLALFP
Sbjct: 141 VRQVPGDGNCLFHSLSLCLHYAERQSHFPLKVPESFRELFRRSKKLRNTAVQILQQSTEKGDKLLFMQGQEFLTCSELLSAAASQYNISPEEYCEAMLQDCTWGGGPEIVALVNALRRPIHVYELSVHEELPNGSNSKEFHLSRMACFGSPKFDKREPLHILSADSRFPDITPGRQKKSGNHFLALFP 328
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: B8C8S4_THAPS (OTU domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8S4_THAPS) HSP 1 Score: 188 bits (477), Expect = 1.770e-51 Identity = 102/235 (43.40%), Postives = 135/235 (57.45%), Query Frame = 1
Query: 73 WRHSAKIK-RDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLD----LSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASN------------------------GVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVA 690
W A I+ + G + ++ + + +RQVPGDGNCLFH+I+ CL NGTH S+D + +L +S LR AVD L + +K L+L+ EE + ELL AAQ+ + E YCE+MR+ S WGGGPEIVAL N L RPIH+YEL F RRMACFGSP +D ++ +HILSADSRFP+++P + GNHFLALFP + A
Sbjct: 120 WEPLANIRGKHGPRSRTYPKSLVDIPVEIRQVPGDGNCLFHSIAVCLYKVVNGTHISMDSPRSIHQLRCQSLHLRNCAVDVLQNVPRKRLFLQGEEYLEANELLGAAAAQFELDGEEYCELMRKESYWGGGPEIVALCNYLQRPIHIYELIPTQQKTTDXXXXXXXXXSQPEHAQPTSTQFTLRRMACFGSPKYDRREPLHILSADSRFPDIEPRKIRKVGNHFLALFPVTTSAA 354
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Match: K0SP19_THAOC (OTU domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SP19_THAOC) HSP 1 Score: 180 bits (457), Expect = 3.790e-49 Identity = 111/261 (42.53%), Postives = 145/261 (55.56%), Query Frame = 1
Query: 73 WRHSAKIKRDGFLTDSFA-VQGISTNMA-----------------------VRQVPGDGNCLFHAISACLDHACNGTHPSLDLSE----LMPKSAALRKVAVDYL-----------VDNL----KKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYEL------ASNGVS------------FCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFP 672
W S++I GFLT+S+ V G ++A +RQVPGDGNCLFH+I+ CL A NGT +D E L +S ALR AVD L +D++ ++ L+L+ +E + +ELL+ AAQ+++ E YC +MR+ S WGGGPEIVAL N L RPIH+YEL AS+ S F RRMACFGSP FD K+ +HILSADSRFP+++ R GNHFLAL P
Sbjct: 88 WNPSSRIDTQGFLTESYLRVNGEWESLANIRGKHGPRNRRNFERMKEQPVRIRQVPGDGNCLFHSIAVCLYRAVNGTDIPMDSHECIGRLRDQSLALRNAAVDVLQQQPTKPGVQFIDSIGPKTRRVLFLQGDEYLEAHELLNAAAAQFDLDGEEYCNLMRKESYWGGGPEIVALCNYLQRPIHIYELIPSDEKASSRASQEKYKKLKVSNQFSLRRMACFGSPKFDRKEPLHILSADSRFPDVEARRM---GNHFLALHP 345 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10573.533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10573.533.1 >prot_Ecto-sp13_S_contig10573.533.1 ID=prot_Ecto-sp13_S_contig10573.533.1|Name=mRNA_Ecto-sp13_S_contig10573.533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp MKITAALVSALLLPASSFAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMback to top mRNA from alignment at Ecto-sp13_S_contig10573:780..5305+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10573.533.1 ID=mRNA_Ecto-sp13_S_contig10573.533.1|Name=mRNA_Ecto-sp13_S_contig10573.533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4526bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10573:780..5305+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10573:780..5305+ >mRNA_Ecto-sp13_S_contig10573.533.1 ID=mRNA_Ecto-sp13_S_contig10573.533.1|Name=mRNA_Ecto-sp13_S_contig10573.533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10573:780..5305+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |