mRNA_Ecto-sp13_S_contig10566.527.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.530e-78 Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1
Query: 1 FGVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCPVDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRHR 369
FGVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCPVDIAV FPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRHR
Sbjct: 1435 FGVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCPVDIAVSFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRHR 1557
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.510e-34 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCPVDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAY 360
GV+P L+F+ V LPVVPL V S A F+V N GFS++EV+YRL P ++ V FP+GR LG G + VE++F+S KP SFS LDVFD++ G Y + + GCADNCLLTN+PFV A+
Sbjct: 665 GVYPRLSFSCDEVVLPVVPLGVRSAARFLVVNQGFSELEVTYRLLPQSPPELRVDFPDGRTLGVGRPSLFVEVTFQSDKPASFSVPLDVFDSENGQYSVTVTGCADNCLLTNWPFVAAH 783
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A024UTG8_9STRA (Calponin-homology (CH) domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTG8_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.720e-29 Identity = 54/122 (44.26%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRH 366
G+ P L+F+ + V+LP VPL +TS A F + + G+ ++E+SYRLP V IAV FP+G+ +G ++ V++SF STK ++F+ L+ FD +G + LP+ G DNC+LTNF FV+A+R+
Sbjct: 1228 GIHPHLSFSVARVDLPTVPLGITSTATFFICSTGYDNLELSYRLPIDLSRVPIAVTFPDGKSIGIANPKVQVDISFVSTKSIAFNAKLEFFDVEGNQFDLPLSGATDNCILTNFGFVEAHRN 1349
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A2R5GBW7_9STRA (Cilia-and flagella-associated protein 65 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBW7_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.460e-29 Identity = 57/121 (47.11%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYR 363
GV+P L F S V LP VPL V ++ VF ++N+G+ +++ YRLP V +A+ FPEG+ +G QIPVE++F S KP+SF+ +D D DG + + I G A+NCLLT FPFV A R
Sbjct: 1450 GVYPKLRFDTSEVVLPTVPLGVKAKGVFYIQNDGYDSLDLRYRLPAETQRVPLAISFPEGKNIGLSRPQIPVEVTFTSRKPMSFTAKVDFVDTDGNAFGIYITGTAENCLLTAFPFVAAVR 1570
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A6A4ZVD0_9STRA (Calponin-homology (CH) domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVD0_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.250e-28 Identity = 52/122 (42.62%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRH 366
G+ P L+F+ V+LP VPL +TS A F + + G+ ++E+SYRLP V I V FP+G+ +G ++ +++SF STK ++F+ L+ FDA+G + +P+ G DNC+LTNF FV+A+R+
Sbjct: 264 GIHPHLSFSVPRVDLPTVPLGITSTATFFIYSTGYDNLELSYRLPIDLSRVPITVTFPDGKAIGIANPKVQIDISFMSTKSIAFNAKLEFFDAEGSQFDVPLSGATDNCVLTNFGFVEAHRN 385
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: W4GNF4_9STRA (Calponin-homology (CH) domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNF4_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.290e-28 Identity = 52/122 (42.62%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRH 366
G+ P L+F+ V+LP VPL +TS A F + + G+ ++E+SYRLP V I V FP+G+ +G ++ +++SF STK ++F+ L+ FDA+G + +P+ G DNC+LTNF FV+A+R+
Sbjct: 1230 GIHPHLSFSVPRVDLPTVPLGITSTATFFIYSTGYDNLELSYRLPIDLSRVPITVTFPDGKAIGIANPKVQIDISFMSTKSIAFNAKLEFFDAEGSQFDVPLSGATDNCVLTNFGFVEAHRN 1351
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A485LET0_9STRA (Aste57867_20364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LET0_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.450e-28 Identity = 52/122 (42.62%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAYRH 366
G+ P L+F+ V+LP VPL +T+ A F + + G+ ++E+SYRLP V I V FPEG+ +G ++ ++LSF TK ++F+ L+ FDA+G + LP+ G DNC+LTNF F++A+R+
Sbjct: 1224 GIHPHLSFSVPRVDLPTVPLGITTTASFFIHSTGYDNLELSYRLPIDLSRVPITVTFPEGKSIGIANPKVQIDLSFCCTKSIAFNAKLEFFDAEGSQFDLPLSGATDNCVLTNFGFLEAHRN 1345
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: A0A329S381_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S381_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.190e-25 Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAY 360
G++P L+F+ + V LP VPL VT+ A F V G+ +E++ R+P + VLFP G+ L +PVEL F ST V+F+ ++ FDADG + LP+ GCA+NCL TN+ F+ A+
Sbjct: 1416 GIYPHLSFSTNRVVLPTVPLGVTASAKFQVYATGYDHLELNCRVPLDTSRAPLTVLFPRGKTLSMACPSLPVELRFSSTSSVAFNARVEFFDADGNSFTLPVAGCAENCLFTNYTFLQAH 1535
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: W2QTD5_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QTD5_PHYPN) HSP 1 Score: 107 bits (267), Expect = 1.410e-24 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAY 360
G++P L+F+ + V LP VPL +T+ A F V G+ +E++ R+P + VLFP G+ L +PVEL F ST V+F+ ++ FDADG + LP+ GCA+NCL TN+ F+ +
Sbjct: 567 GIYPHLSFSTNRVVLPTVPLGMTANAQFHVYATGYDHLELNCRVPLDTSRAPLTVLFPRGKTLSMACPSLPVELRFSSTSSVAFNARVEFFDADGNSFALPVAGCAENCLFTNYSFLQTH 686
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Match: V9FWK4_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FWK4_PHYPR) HSP 1 Score: 107 bits (267), Expect = 1.430e-24 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 4 GVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCP-VDIAVLFPEGRQLGAGVEQIPVELSFRSTKPVSFSCMLDVFDADGGHYPLPIRGCADNCLLTNFPFVDAY 360
G++P L+F+ + V LP VPL +T+ A F V G+ +E++ R+P + VLFP G+ L +PVEL F ST V+F+ ++ FDADG + LP+ GCA+NCL TN+ F+ +
Sbjct: 1407 GIYPHLSFSTNRVVLPTVPLGMTANAQFHVYATGYDHLELNCRVPLDTSRAPLTVLFPRGKTLSMACPSLPVELRFSSTSSVAFNARVEFFDADGNSFALPVAGCAENCLFTNYSFLQTH 1526 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10566.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10566.527.1 >prot_Ecto-sp13_S_contig10566.527.1 ID=prot_Ecto-sp13_S_contig10566.527.1|Name=mRNA_Ecto-sp13_S_contig10566.527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp FGVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSYRLPQHCPback to top mRNA from alignment at Ecto-sp13_S_contig10566:5147..5762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10566.527.1 ID=mRNA_Ecto-sp13_S_contig10566.527.1|Name=mRNA_Ecto-sp13_S_contig10566.527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10566:5147..5762+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10566:5147..5762+ >mRNA_Ecto-sp13_S_contig10566.527.1 ID=mRNA_Ecto-sp13_S_contig10566.527.1|Name=mRNA_Ecto-sp13_S_contig10566.527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10566:5147..5762+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |