mRNA_Ecto-sp13_S_contig1055.517.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI) HSP 1 Score: 1132 bits (2929), Expect = 0.000e+0 Identity = 594/644 (92.24%), Postives = 607/644 (94.25%), Query Frame = 2
Query: 62 MRRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPETDLQGTAGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLTPGSRATQRDAGGGNGKGNTSTTRSRTVDIPGGGEPPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLVSGRGSIASFLRVLPPPSPPPQQXXXXXTSPFKKLGSKGVKPNAKEALAASPSGQAGGGSSLPEGDDEDVPGRETAEASTGLREVPRVGGKDGSRVDRSRNFEPSSHLAGDARDEKTAPSALRPGHERCPKCGKVLAQEDLPEHLDFHYAEGLQERYTREGDVARDMAARMSDRRGLPKRKVHEAGGGKGAKSQTKRPATGPRIDSFFRPT 1993
M RSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRT AAKQKCPQITLVHVETIGADDELDDAGTR+DKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQE EAGNARDVADSPETDLQGTAG+RVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAE ASDLKRFSQQDLVGNFGTKTGEWLWRACRGMD+EPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISL PGSRA QRDAGGGNGK NTSTTRSRTVDIPGGGE PTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGL+SGRGSIASFLR LP XXXXXTSP +K GSKGVKP+AK+ALA PSGQAGGG SLPEGDDEDVPG ETAEAS G R+VPRVG KD SRVDRSRNF+PSSHLAG A DE+TAPS LRPG+ERCPKCGKVLA EDL EHLDFHYAEGLQERYTREGDVARDMAARMSDR GLPKRK+ EAGGGK AKSQTKRPA G RIDSFF+PT
Sbjct: 1 MLRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTTAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAEKASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDDEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKSNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLISGRGSIASFLRALPXXXXXXXXXXXXXTSPLEKWGSKGVKPDAKQALAVDPSGQAGGGRSLPEGDDEDVPGTETAEASIGPRDVPRVGSKDDSRVDRSRNFQPSSHLAGAACDERTAPSPLRPGYERCPKCGKVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEAGGGKRAKSQTKRPAAGLRIDSFFKPT 644
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC) HSP 1 Score: 343 bits (881), Expect = 2.240e-105 Identity = 212/455 (46.59%), Postives = 271/455 (59.56%), Query Frame = 2
Query: 89 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDE---LDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVAD------SPETDLQGTAGYRVD----PTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLTPGSRATQRDAGGGNGKGNTSTTRSRTVDIPGGGEPPTTAS---LVSEAMAVFAKT--DNALPCSRLALTAHEFCGLVSGRGSIASFLR 1396
RV+ H DLD FYCQVEH RL I VPLAVQQWDGLIAVNY AR +GV+RGDRTA AK KCP + LVHVETI +D DD R+D+ KVSL+RYRTAS IMAIF HC +VERASIDEAYLDLT++ + G +A+ + ++ L G +D ++ + +L+ GA L A +R AV E FTVSAGI+ NK+L+K AS+ +KPN+QT+VP + DM+ +PLR VRGLGGKLGE V + A TA DL+ S ++L F TG WLWR CRGMD+E V+PNLKPKSL KSF PVR E + W+ +L E+ R+ D EA RRA L Q L+ + RSR+ +P G +P S LV+ +A+ K D LPCSR+ + A +F + S SI S+ +
Sbjct: 17 RVVAHLDLDAFYCQVEHRRLNIARDVPLAVQQWDGLIAVNYPARAAGVRRGDRTAVAKGKCPDLVLVHVETISSDGRHPGSDDPADRHDRQREKVSLDRYRTASAEIMAIFSRHCPKVERASIDEAYLDLTQQVQAELKRVVGGGGPSLAELVDAEGTRDSTLLAVDGSVLDVDKVSLDSPEASLVVGAVLIARLRKAVLDETQFTVSAGISHNKMLSKQASAKHKPNRQTLVPTSSIDDMMGHLPLRDVRGLGGKLGEAVSRVFPDATTAKDLQAHSLEELKRTFNDGTGTWLWRVCRGMDDEQVSPNLKPKSLLAFKSFRPVRKMEDLERWLGVLAEEVCDRMQADTEAHRRRAKTLMAQHRGLSGAA-------------------RSRSGPMPRGKDPHGLLSKDELVAAGLALLRKLPEDELLPCSRIGMGAQDFEDIDSQTASITSYFK 452
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA) HSP 1 Score: 318 bits (814), Expect = 4.700e-95 Identity = 243/716 (33.94%), Postives = 338/716 (47.21%), Query Frame = 2
Query: 92 VIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGAD--------DELDDAGTRN----------DKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPE-TDLQGTAGYRVDPTNAF-DRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAET---------ASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQ----------------------------------MISL------TPGSRATQRDAGGGNGKGNTSTTRSRTVDI-PGGGEPPTT---------ASLVSEAMAVFAKTDN-----ALPCSRLALTAHEFCGLVSGRGSIASFLRVLPPPSPPPQQXXXXXTSPFKKLGSKGVKPNAKEALAASPSGQAGGGSSLPEGDDEDVPGRETAEASTGLREVPRVGGKDGSRVDRSRNFEPSSHLAGDARDEKTAPSALRPGHERCPKCGKVLAQEDLPEHLDFHYAEGLQERYTREGDVARDMAARMSDRRGLPKRKVHEAGGGKGAKSQTKRPATGPRIDSFFR 1987
VI+H DLDCFYCQVEH RL IP S PLAVQQW+GLIAVNY AR GV+RGDR AK KCP + VHVETIG D +E GT D+ CKVSLERYR+ASF ++ + A C VERASIDE Y D+TE A + + D+ SPE T+ Q G +DPT+ D LL GA +R + +E FTVSAGIA K+ AK+AS+ +KPNKQT+VP ++ +++ T+ L +RGLGGKLGE V ++ +++ A L+ ++ L+ FG KTG WL R CRG+D +PV+PNL+PKS++ KSF+ + +L W+ +LC EL+ RIA D + RR LTLQ ++SL + S+ +R + G + + + D P G E TT A L S A V +K +N LPCSR+AL +FC ++ FL+ P + + E+ A E+++ TG R G GS P+ AGD +T C +CG +A + + EH+DFH+A +Q+++ A+ + + + G ++K A S RIDSFF+
Sbjct: 1 VILHLDLDCFYCQVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIGEDGAAGLPSGEETHHRGTVGAPSAGQAQAPDRETCKVSLERYRSASFEVLRVIDAACPAVERASIDEVYCDVTEAALRRLKS-------DMPPSPEQTETQVVGGCPLDPTDTHGDALLLMGATFADELRRKIREETTFTVSAGIAHGKMFAKIASAKHKPNKQTIVPFASTEELMRTIELSDIRGLGGKLGEEVSTFLRSQDTPKTDGTFRAIALQAVPERLLIRQFGEKTGRWLHRICRGLDTDPVSPNLRPKSINCFKSFSTITAMAPLLRWLDVLCGELTDRIAADHALFKRRPRVLTLQHRSTLRPDHLKNWKAGVTSELTGMRSRSAALPPSLVSLILACYSSKQSKKRKRQSVDGAATPLVDSIQVHSGDAEPLGSEGETTPLTSSPAFPAELQSLARLVMSKLENDSGVPTLPCSRIALGVSDFCSESKASRVLSDFLKAQP------------------------CRKTSAESSA------------------------ESSDGHTGPRPGHDAVGDSGS---------PAQAAAGDGNLVRTT----------CERCGASIALDAIQEHMDFHFAADVQQQWR--SQEAKQSSDKQQRKPGPVRKKATTKTKTGAASSGLASHGPFSRIDSFFQ 640
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A7S3C888_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C888_9CHLO) HSP 1 Score: 265 bits (678), Expect = 1.250e-77 Identity = 154/352 (43.75%), Postives = 210/352 (59.66%), Query Frame = 2
Query: 89 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPETDLQGTAGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMIS 1141
RVI+H DLD FYCQVEH RLGI +VPLAVQQW GLIAVNY AR +GV R AK CP + LVHVETIG +KG K SL RYR ASF ++ + + ++ERASIDE Y+D+T + +G+ D ++ G ++P++ D L+ GA++ +R A++ E + +SAGI+ NK+L+KLAS++NKPNKQT+VP A ++ T+ + + GLGGKLG+ +V + +TA DL+ ++DLV G KT WL + CRG + V PNL PKSL+ CKSF P + +V W+ +L ELS RI D E + R L L S
Sbjct: 5 RVILHLDLDAFYCQVEHKRLGIDRNVPLAVQQWAGLIAVNYPARANGVGRFCDINEAKTACPDLRLVHVETIGNTKGGKVGAVEANKGTSKASLARYRRASFEVINVMKRFSDKIERASIDEVYIDVTALVDDRLRR--SGDFSDGGGLEWSESHVAEGAALNPSSEHDIRLIMGAKVCKEIRDAIKAETEYEMSAGISHNKLLSKLASAMNKPNKQTIVPTSAVPSLMSTLEYKQINGLGGKLGDRLVQLFPGLKTALDLQGVPREDLVRGLGEKTAGWLQQLCRGDCDSDVKPNLLPKSLNACKSF-PASELGAVKKWLLILAEELSDRILEDHEDFGRTPRLLVLHARS 353
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A0U9HQB4_KLENI (Putative Y-family DNA polymerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HQB4_KLENI) HSP 1 Score: 276 bits (705), Expect = 1.450e-76 Identity = 166/359 (46.24%), Postives = 211/359 (58.77%), Query Frame = 2
Query: 89 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPET-------------DLQGTAGYRV-----DPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRR 1111
RVIVH DLD FY VE VRLG+P PLAVQQW+GLIAVNY AR GV R A AKQKCP + LVHVE IG ++ ++G KVSLERYR AS I+ IF E+ASIDEAYLDLT + L ++ V D+PET +Q + V DP+N +DR LLAGA + A MR AV ELG+T SAGIA NK+LAKLAS++NKP KQTVV A ++ P+R +R LGGK+G+ + ETA D+++ + L+ G K G W++RA RG+ +EPV KS+ KS++ E V +W+RLL EL+ RI D + RR
Sbjct: 3 RVIVHVDLDAFYAAVEQVRLGLPLDQPLAVQQWEGLIAVNYAARAKGVTRFMAIAEAKQKCPDLRLVHVEVIGG-------SSKREEG--KVSLERYRQASANILPIFHRFSPLCEKASIDEAYLDLTAQVEALLNQSPEPETAPVYDNPETASASEKSEPISMASVQSRSDVIVLDGPLDPSNEYDRRLLAGATIVAQMREAVFHELGYTCSAGIAPNKLLAKLASAMNKPYKQTVVTPRAIPGLMKDFPMRKIRNLGGKMGKELCDTLGCETAGDVQKIPEAVLIEKLGDKMGPWVFRAVRGIHDEPVQTRQISKSMLAAKSYSLTNSIEDVRHWLRLLSMELAARIEYDVKLNKRR 352
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A2R6VZP2_MARPO (UmuC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZP2_MARPO) HSP 1 Score: 266 bits (680), Expect = 4.090e-74 Identity = 154/355 (43.38%), Postives = 206/355 (58.03%), Query Frame = 2
Query: 74 HAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLT--------------EEAAKLCQEAEAGNARDVADSPETDLQGTAGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDRE 1096
H H V++H DLDCFY VEHVRLGIP VPLAVQQW+GLIA+NY AR +G+ R +R A +KCP++ VHVETIG D +R G KVSLERYR AS + IF+ E+ASIDEAYLD+T +E +L E G+ V D P + P N++DR +LAGA + +R AV ELG+T S GIA+NK+LAK+AS+ NKP+KQT+VP A ++ ++PLR V+ LGGKLGE + TA + + LVG FG + G ++W A RG+ N+ V KS+ K+F ++ + W+ +L ELS R+ D E
Sbjct: 14 HNTHSSVVLHVDLDCFYAAVEHVRLGIPREVPLAVQQWEGLIAINYAARAAGITRHERVHQAMRKCPELKCVHVETIGDGSGNVDGTSR---GHAKVSLERYRQASANVFKIFRRFSDLCEKASIDEAYLDVTSRVEKMMIQGCNWDQELHRLIGNQEEGSEMIVLDGP-----------LVPFNSYDRRMLAGAIIAEKIRAAVRSELGYTCSVGIATNKLLAKIASAKNKPDKQTLVPPRAVPYLMQSMPLRKVKLLGGKLGEEMTEKWGVSTAGEAQAVPLPALVGCFGERLGNYVWNAVRGIQNDKVQVKQVSKSMLAAKTFHSTKELSDIRMWLSILAEELSVRMLRDFE 354
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A7S3EFR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFR3_9RHOD) HSP 1 Score: 254 bits (649), Expect = 1.420e-72 Identity = 167/441 (37.87%), Postives = 237/441 (53.74%), Query Frame = 2
Query: 89 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPETDLQGT----AGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLTPGSRATQRDAGGGNGKGNTSTTRSRTVDIPGGGEPPTTASLVSEAMAVFAKTDN-ALPCSRLALTAHEFCGLVSGRGSIASFLR 1396
RVI H DLD FY QVE VRLG+ PL VQQW+G+IAVNY ARK GV R D+ K+KCP+ LVHVE + +E +D ++ KVSL RYR AS I + RVERASIDEAYLDLT+ K R + D+ E + + G +DP+ D +L+ G+ +T+ +R + +ELG+T SAG+A NK LAKLAS++NKPN QT+VP +++ +P R +R LGGKLG + + ETA ++ + ++L FG K +++ RG+D V P KPKS+ KS +D + V W+R+L +EL R+ D E R A L + S G+ T S+T+ +P G + A ++ E ++ T + + P + L LTA F + SI FL+
Sbjct: 7 RVIAHVDLDAFYAQVEMVRLGVDEDAPLCVQQWEGVIAVNYPARKRGVTRFDKAGEVKKKCPECILVHVEVLT--EEREDG---KEQPKAKVSLARYREASARIFKLILREIERVERASIDEAYLDLTDMVKKR---------RVIRDNDENLGRASDCIVLGEELDPSRKDDLSLIIGSEITSDLRRMIREELGYTCSAGVAHNKTLAKLASAMNKPNCQTLVPNSCVQGLMEKLPFRKIRQLGGKLGVELEALG-VETAGQVQCYKLEELSRRFGQKNAHFVFDIVRGIDRSEVVPRSKPKSMLAAKSLPGEQDWDGVNRWLRMLASELHDRMLFDEEVNVREARNLVISFKS------------------GSVPRTTSKTLPMPRG-QSNRLARMLEEIQSLLRITPSFSFPIAFLGLTATNFEEKPADNESINKFLK 413
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A1X2HCH0_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HCH0_SYNRA) HSP 1 Score: 256 bits (654), Expect = 1.980e-72 Identity = 176/479 (36.74%), Postives = 238/479 (49.69%), Query Frame = 2
Query: 50 VPYNMRRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQE----AEAGNARDVADSP------------------------ETDLQGTAGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTP-VRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLTPGSRATQRDAGGGNGKGNTSTTRSRTVDIPGGGEPPTTASLVSEAMAVFAKTDNALPCSRLALTAHEF-CGLVSGRGSIASFLR 1396
+P N+R S RVIVH DLDCFYCQVE VR G+PT VP AVQQW GLIAVNY AR +GV R A++ CP+I L+HV T ++ R + KVSL+ YR AS I IF+ HC V++ +DE ++DLTE +L + A D+ D P + D DP D L GA L AA+R + EL +T SAGIA NKV+AKL SS NKPNKQT++ A++ + P +R LGGKLG V + + A DL +++ DL FG TG WL+ RG+DNE V PKS+ KSF P V+ E + W L EL R+ ++ + + LT+ R+TQ +T R+R+ +P + + L A+ +F K ++ALPC L+L A G SI+ F +
Sbjct: 5 LPRNLRGS-----RVIVHIDLDCFYCQVEQVRRGVPTHVPAAVQQWQGLIAVNYAARAAGVTRHANIEDARKACPEIQLLHVATYAENETEWKYHARPSRATHKVSLDPYREASKKIFTIFKRHCDTVQKIGLDECFMDLTETVNELMTKRYPTAALAADDDLCDQPIDWNKLGVTIASEDESERRRQLDNDVDADHEEESWRDPATWQDLQLAIGAELAAAIRQEIYDELSYTCSAGIAHNKVVAKLCSSKNKPNKQTILRHCATAAFMRDTPFTKIRNLGGKLGTEVETELNIDKAGDLWKYTVNDLQQRFGESTGLWLYNVARGIDNEEVTVTKAPKSIMASKSFRPPVKSSEEMQRWFATLAAELHTRMMLNFDEFDAWPKTLTIHY-------RSTQ-----------DTTYRTRSCAMPRRTDLTSPDKLAQRAIILFGKAEDALPCVGLSLNAVAMQSSQTVGNHSISEFFK 460
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A2K1JJV7_PHYPA (UmuC domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JJV7_PHYPA) HSP 1 Score: 257 bits (657), Expect = 7.990e-72 Identity = 149/348 (42.82%), Postives = 211/348 (60.63%), Query Frame = 2
Query: 83 HGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQ-----EAEAGNARDVADSPETDLQGTA-----GYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDRE 1096
H V++HADLDCFY VE VRLGIPT PLAVQQWDGLIAVNY AR G+ R +R + A +KCP + LVHVETIG D + + +G K SLERYR AS + IF+ + + ERASIDEAYLD++E+ ++ + E+E + S ET +G G + NA+DR LLAG+ + MR +V ELG+T+S GIASNK+LAK+AS+ NKP++QT++P A ++ +PL+ ++ LGGKLGE + TA + ++ LV FG + G + W+A +G+ E V KS+ KSF + + + W+ +L +L+ R++ D E
Sbjct: 6 HTSVVLHADLDCFYAAVEQVRLGIPTEQPLAVQQWDGLIAVNYAARAVGIVRHERVSEALRKCPDLHLVHVETIGGD-KPGTPESLGPRGNAKASLERYRQASAKVFNIFRRYSKLCERASIDEAYLDVSEQVEEMLEKDMDWESELHRLLEPTGS-ETTSKGVPVMLIEGGSLAIYNAYDRRLLAGSIIADRMRASVRNELGYTISVGIASNKLLAKIASAKNKPDRQTLIPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWGCTTAGEAQQIPHAALVACFGDRLGTYAWKAVQGLKAEQVQVKDLVKSMLASKSFGAINELAGIRRWLSVLSHDLAIRMSRDFE 351
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Match: A0A5B8MBX0_9CHLO (DNA polymerase eta/iota n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBX0_9CHLO) HSP 1 Score: 252 bits (644), Expect = 1.420e-71 Identity = 154/350 (44.00%), Postives = 209/350 (59.71%), Query Frame = 2
Query: 89 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRNDKGACKVSLERYRTASFAIMAIFQ--AHCRRVERASIDEAYLDLTEEAAKLCQEAEAGNARDVADSPETDLQGTAGYRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDNEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTL 1129
+VI+H DLD FY QVEH RLGI SVPLAVQQW GLIAVNY AR GV R AK +CP + LVHVETIG + G +K K L RYR+AS ++ Q + +ERASIDE Y+D T + + E G + + D E+ + G ++ + D L+ GA+L +R AV+ E + +SAGI+ NK+L+KLAS++NKPN QT+VP+ A ++D + + GLGGKLGE + + + +T+ DL+ Q+DL + G KTG W+ CRG +EPV PNL PKSL+ CKSF P E V W+ +L EL+ RI DR+ ++R L L
Sbjct: 5 KVILHLDLDAFYAQVEHRRLGIDRSVPLAVQQWAGLIAVNYAARSRGVGRFCDIQEAKSRCPDLKLVHVETIGNTSDGRMGGVAANKATSKACLNRYRSASTEVLKAMQRFSDVLLIERASIDEWYIDATALVEERLEGVEEGGSCSL-DWRESHV--CKGASLNASLDCDVRLIVGAKLCKEIRDAVKAETEYEMSAGISHNKMLSKLASAMNKPNMQTIVPSSAVEALMD-LDYTEINGLGGKLGEKLKTLYPNLKTSRDLQTIGQEDLARSLGQKTGAWIHALCRGEVDEPVKPNLLPKSLNACKSF-PASPIEQVHKWLLILAEELADRIEQDRQDFARMPRFLVL 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1055.517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1055.517.1 >prot_Ecto-sp13_S_contig1055.517.1 ID=prot_Ecto-sp13_S_contig1055.517.1|Name=mRNA_Ecto-sp13_S_contig1055.517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=645bp MRRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYback to top mRNA from alignment at Ecto-sp13_S_contig1055:12674..18943+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1055.517.1 ID=mRNA_Ecto-sp13_S_contig1055.517.1|Name=mRNA_Ecto-sp13_S_contig1055.517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1055:12674..18943+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1055:12674..18943+ >mRNA_Ecto-sp13_S_contig1055.517.1 ID=mRNA_Ecto-sp13_S_contig1055.517.1|Name=mRNA_Ecto-sp13_S_contig1055.517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1935bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1055:12674..18943+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |