mRNA_Ecto-sp13_S_contig1055.516.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: D7FVN2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN2_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 8.380e-164 Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 2
Query: 107 MRHRASAISEQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVVAERLLKTCAEPKRDLAKIAAEIADLRSRTSALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVPAKSKKPLSLVFAKEPDLEGELAKLRVAGDKKEDKKKK 874
MRHRASAISEQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADV+AERLLKTCAEPKRDL KIAAEIADLRSRTSALKPAQSYELGK+WRLVFASDDDAISVVGTGLHKLPLTRMQDFF+TLEGG+NTARNIVTIEVLRVIGPFPNLRNTLSG CKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESV AKSKKPLSLVFAKEPDLEGELAKLRVAGDKK+DKKKK
Sbjct: 1 MRHRASAISEQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFITLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGGCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAKEPDLEGELAKLRVAGDKKDDKKKK 256
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A835YNB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB0_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.740e-44 Identity = 105/223 (47.09%), Postives = 136/223 (60.99%), Query Frame = 2
Query: 176 GKKRKKMEKDALKYADGINKNVARETQKEADVVAERLLKTCAEPKRDLAKIAAEIADLRSRTSALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKE-TGGSQTGEQDRVVDVDVAFVGQGVLVLESVPAKSKKPLSLVFAKEPDLEGELAKLRV 841
GKK++ +E D DG + E +K D +A +LL C RD A I A+ DL S+ A+KPAQS EL K+WRLV+ S D + +G+GLHKLPLTRM+D F++ G R I T EVLRVIGPFPN++N LSG KS G L I YTSMIDGTGKE T G+ D V ++V FVG ++V A + + +V+ +E DLEG L +LRV
Sbjct: 52 GKKKRALEVDE----DGTVQQSKAELKK-LDELAAQLLNLCTTNARDTAAIQAQARDLGSK--AVKPAQSAELSKDWRLVYVSSGDVLGALGSGLHKLPLTRMEDQFVSFAGSRGLGREITTTEVLRVIGPFPNVKNVLSGTYKSMGTSELLINYTSMIDGTGKEITSGNAA--MDGNVSIEVVFVGSDIMVTAPRDASGARQV-MVYQREEDLEGALKRLRV 264
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S2UVC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC0_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.380e-41 Identity = 95/223 (42.60%), Postives = 139/223 (62.33%), Query Frame = 2
Query: 182 KRKKMEKDALKYADGINKNVARETQKEADVVAERLLKTCAEPKRDLAKIAAEIADLRSRTSALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKET-GGSQTGEQDRVVDVDVAFVGQGVLVLESVPAKSKKPLSLVFAKEPDLEGELAKLRVAG 847
K+KK + + KNV ++EA +VA+ LL+ C KRD KI++ + +L+ T ++ PAQS L +W +VF +D DA+ VGTGL KLPLT+M+ F++ +G + R+I E+LR++GPFPN++N LSG K+ GA SL+I+Y MIDGTGKE GS T DR + ++V FVG+ LV ++P+ +V +E DL+ L KLRV G
Sbjct: 58 KKKKSRSNGTEEKTLKKKNV----EQEAGIVADGLLELCTAEKRDTEKISSVVEELKKYTDSIMPAQSSNLRGDWEVVFVTDADALDHVGTGLRKLPLTKMEAMFLSFDGSRSVGRSIEASEILRILGPFPNVKNKLSGTYKAQGARSLSIKYDLMIDGTGKEVKSGSAT--TDRSISINVEFVGEKALVA-TIPSSQH---IMVLKREVDLDEALRKLRVDG 270
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S3YGC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGC3_HETAK) HSP 1 Score: 109 bits (273), Expect = 6.900e-25 Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 2
Query: 401 NWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGD--CKSTGAGSLNIRYTSMIDGTGK--ETGGSQTGEQDRVVDVDVAFVGQGVLVLESVPAKSKKPLSLVFAKEPDLEGELAKLRV 841
+WRL + S + +GTGLHKLPLTRM+D F++ G R EVLRV+GPFPNLRN LSGD S+G G ++++YT MIDGTGK E+G DR ++ V + G LV+ +K +LVF +E +L+ L LRV
Sbjct: 1 DWRLAYVSAAAGLDEIGTGLHKLPLTRMEDLFLSFSGSKAAGRAAACTEVLRVLGPFPNLRNKLSGDFGISSSGTG-ISLKYTQMIDGTGKMLESGNGM----DRKNNLQVIYSGLDGLVM-----LTKTGCALVFQRETNLQAALKALRV 141
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A8J2STN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STN9_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.330e-22 Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 2
Query: 266 DVVAERLLKTCAEPKRDLAKIAAEIADLRSRTSALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVPAKSKKPLSLVFAKEPDLEGELAKLRVAGDKKED 862
D A ++L+ C E RD I A + DL + + P + +WRLV+A D+ + +GTGLH++PL ++D F++LE + A EV+RVIGPFPN++N L+G + G +L + YT +IDGTG E T Q R V + +A + + +LV+ + + LVF +E D L +LRV + ED
Sbjct: 75 DEKASKVLELCKEENRDFDAIDAAVKDLAALPAY--PDIGFRARGDWRLVWAKSDEGVGFIGTGLHRVPLANLEDQFLSLEADGSCALT----EVIRVIGPFPNVKNLLTGT-STVGPSTLRLTYTKVIDGTGAEL----TSSQARSVKLRLAALSKSLLVVAAASIDADD--WLVFEREDDFADALERLRVPPNTPED 260
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S1VIR5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIR5_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.230e-21 Identity = 65/171 (38.01%), Postives = 97/171 (56.73%), Query Frame = 2
Query: 365 ALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGS-----LNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVL-------ESVPAKSKKPLSLVFAKEPDLEGELAKLRV 841
+L+P + + ++RL +A D+ + VGTGLHK+PL RMQ+ F++L+G I +EV+ ++GPFPN+RNTL GDC AG +++ SMIDGTG E +G + R V + + F + LV +S P LVF +E DL+G+LA+ RV
Sbjct: 240 SLRPLTTSKTKLDYRLAWAGSDETLCHVGTGLHKVPLARMQEVFLSLKG----RNEIEVLEVISILGPFPNVRNTLQGDCMDMKAGDGSFTEWTVKWESMIDGTGNEI---LSGGEARKVPLHMYFSDKNALVAVVPNDDNDSDPLGENGKNVLVFVREKDLDGKLAENRV 403
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S2I456_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I456_9STRA) HSP 1 Score: 105 bits (261), Expect = 5.420e-21 Identity = 76/225 (33.78%), Postives = 115/225 (51.11%), Query Frame = 2
Query: 254 QKEADVVAERLLKTCAEPKRDLAKIAAEIADLRSRTS--------ALKPAQSYELGKNWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCK---------STGAGSLNIRYTSMIDGTGKETGGSQTGEQD--RVVDVDVAFVGQGVLVLESVPAKSKK---PLS------LVFAKEPDLEGELAKLRVA 844
QK V +++ P DL ++ + I L +T+ AL+ KN+R+V+ D+A+ +GTGLHK+PL R+++ F+ LE T + +EV+R++GPFPN+RNTL GD G I Y SMIDGTGKE G++D ++VD+DV F V+V P + ++ PL L+F +E + +L KLR A
Sbjct: 180 QKVITTVVDQIETLLESPNTDLNELLSLIRTLTDKTASQTGSIAGALRNLSISPQSKNYRMVWVGSDEAVCHIGTGLHKVPLARLEEVFLCLEKKT-----VQVLEVIRILGPFPNVRNTLMGDSSVIKPPGGTGEKGKTKFRIEYNSMIDGTGKEI---LAGKEDNVKIVDLDVLFADDKVMVCVVPPVEGEEKQDPLGENGSKVLLFFQEDYMNDKLEKLRAA 396
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S1D965_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D965_CYCTE) HSP 1 Score: 101 bits (251), Expect = 1.360e-20 Identity = 65/161 (40.37%), Postives = 91/161 (56.52%), Query Frame = 2
Query: 401 NWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTI-EVLRVIGPFPNLRNTLSGDCKS----TGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLV---------LESVPAKSKKPLSLVFAKEPDLEGELAKLRV 841
++RL + D+AI +GT HK+PL RMQ+ F+ L+G RN + + EV+ ++GPFPN+RNTL G C++ +G G I Y SMIDGTGKE + E R VD+ V +V L S P + +LVF +E DL+ +L KLRV
Sbjct: 104 SYRLAWVGSDEAICHIGTSQHKVPLARMQEVFLLLQG-----RNRLEVYEVISLLGPFPNIRNTLQGSCQTVNNKSGGGVWKITYDSMIDGTGKELLAGKE-ENVRWVDLQVCCADSNAIVAVVPNEDGSLRSNPLEDNGKHALVFVREDDLDTKLDKLRV 258
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S2XKB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKB3_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.580e-20 Identity = 71/193 (36.79%), Postives = 103/193 (53.37%), Query Frame = 2
Query: 311 RDLAKIAAEIADLRSRTSALKPAQSYELGKN--WRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRV--VDVDVAFVGQGVLVLESVPAKSKKPLS------------LVFAKEPDLEGELAKLRV 841
RDL I ++ +L A + + G+N +R+ + DDA+ VGTGLHK+PL R+QD FMT+ G N + EV+R++GPFPN+RNTLSGD + G L Y M+DG GK+ + G D V + +++ F +V +VP K K L+F +EP+LE +L LRV
Sbjct: 155 RDLDSILGKLKELSQLEGATRGLRVLAAGENVDYRMAWVGSDDAVCHVGTGLHKVPLARLQDVFMTV--GKN---RVEVFEVIRILGPFPNVRNTLSGDVAMS-KGQLQFSYDMMMDGLGKQL---EAGTDDNVRKLKLNILFADSNAIVA-TVPNKDAKATDVDDIMGENGANVLLFVREPELETKLEILRV 337
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Match: A0A7S2KRS1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRS1_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.730e-20 Identity = 64/159 (40.25%), Postives = 94/159 (59.12%), Query Frame = 2
Query: 401 NWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGTNTARNIVTIEVLRVIGPFPNLRNTLSGDCK-STGAGS--LNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVG-QGVLVLESVPA-------KSKKPLSL-VFAKEPDLEGELAKLRV 841
++++V+A D A+ VGTGLHK+PL R+Q+ F+++ + + EV+R++GPFPN++N L G+ K S G G L Y+SMIDGTGKE S G + R VD+ V + Q ++ S+ +S SL VF +E DL+GEL LRV
Sbjct: 38 DYKMVWAGSDAAVCHVGTGLHKVPLARLQEVFLSIG-----KKRVEINEVIRILGPFPNVKNMLQGNVKVSVGGGESVLTFTYSSMIDGTGKEL--SAAGSEQRKVDLKVLYAADQAIVCTTSIDDDGAVDYFESDNGASLLVFFREKDLDGELDALRV 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1055.516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1055.516.1 >prot_Ecto-sp13_S_contig1055.516.1 ID=prot_Ecto-sp13_S_contig1055.516.1|Name=mRNA_Ecto-sp13_S_contig1055.516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp MRCTWLQASCISLGVLRLSLVSKGFIVTGTSRLMRHRASAISEQRDRCATback to top mRNA from alignment at Ecto-sp13_S_contig1055:7992..11894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1055.516.1 ID=mRNA_Ecto-sp13_S_contig1055.516.1|Name=mRNA_Ecto-sp13_S_contig1055.516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1055:7992..11894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1055:7992..11894+ >mRNA_Ecto-sp13_S_contig1055.516.1 ID=mRNA_Ecto-sp13_S_contig1055.516.1|Name=mRNA_Ecto-sp13_S_contig1055.516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1055:7992..11894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |