mRNA_Ecto-sp13_S_contig10549.514.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: D7FL27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL27_ECTSI) HSP 1 Score: 734 bits (1895), Expect = 3.800e-260 Identity = 379/434 (87.33%), Postives = 391/434 (90.09%), Query Frame = 1
Query: 1 MTDGAAQSKGVLPMEAKNAAKHSPCAPQGTPIGPTNSVGEGEAVGATSGSSTAGSCPAADDAVGVTSEQLIGGADGTAGATANEDTTGVLGEHGDGIGRDGKAVGFVRLIPGDENNSGRVGEQHSSSDCQKDVDGAAVDAASNTRPNLGGLGKSAGHVVERSKEAQDTVAVKAGVSQLPVRSERMGPQVSKAAPAAGGTRKGQWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ 1302
M DGAAQSKG+LPMEAKNAAK PCAPQG PI PTNSVGE VGATSGSSTAG C AADD VG + QL GGA+GTA AN+DTTGV GE+GDG+GRDGKAV FV+L PG ENNSG +GE+HSSSDCQKD +GAAVDAA NTRPN GLGKS+GHVV+RS EAQD VAVKAGVSQLPVRSE MG QVSKAAPAAGGTRKGQW FKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWI DSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEK SGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVA VREKRPTSLQTNAQ V MVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ
Sbjct: 1 MMDGAAQSKGILPMEAKNAAKPGPCAPQGAPIEPTNSVGE---VGATSGSSTAGGCAAADDVVGANAGQLTGGAEGTARVAANKDTTGVAGENGDGVGRDGKAVCFVKLNPGAENNSGHIGEEHSSSDCQKDAEGAAVDAALNTRPNTDGLGKSSGHVVDRSNEAQDAVAVKAGVSQLPVRSENMGSQVSKAAPAAGGTRKGQWTFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWISDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKASGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVALVREKRPTSLQTNAQ-------VSMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ 424
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A024G075_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G075_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.050e-66 Identity = 121/240 (50.42%), Postives = 152/240 (63.33%), Query Frame = 1
Query: 610 WAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTG-GKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHG 1320
W K KCRFCGG C RCSE AL + + GLH+ WI D I+GM RPSSRLIK Y I QF R +TA+FNLT PGEHP CGDGL +SGFPY PE FM + I YNF WEDMT P ++L+ DI++V S L+ G K+AVHCHAGYGRTGL IA +L+ M+ + P++A+ VR RP S+QT+ QA V EF ++ +V + H T+ Q + QQ L+HG
Sbjct: 10 WEQKLTIKCRFCGGPQCKRCSENAALAKTDSPIPGLHADWITDRILGMMRPSSRLIKQYQITDQFHRHHITAVFNLTIPGEHPFCGDGLG-SSGFPYDPENDFMAQKIQFYNFGWEDMTVPPLSLMMDIVKVMTSMLQDGMQKVAVHCHAGYGRTGLAIACVLLFMHGISPERAIHIVRRDRPGSIQTSGQA-------TFVHEFCEYMNSAKVTFALPFIHEPFTIAQAIEQQNRLMHG 241
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: D0MYX7_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYX7_PHYIT) HSP 1 Score: 231 bits (589), Expect = 4.680e-65 Identity = 121/246 (49.19%), Postives = 154/246 (62.60%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHF-TDHARVTLGQHLAQQAFLLHGQESVN 1335
+W + KCR CGG C RCSE AL + + V GLH+ W+ D + M RPSSRL+ Y I QF + +TA+FNLT PGEHP+CGDGL TSGFPY PE M E I YNF WEDMTTP++A + DI++V S L TG K+AVHCHAGYGRTG+ IA L+ ++N+PP+ A+ VR RP S+QT Q V V +F ++ RVV+ T H R TL + + Q LHG +VN
Sbjct: 9 EWEKTLKVKCRLCGGLRCKRCSESAALAKQDSPVKGLHADWVADCALAMMRPSSRLMNEYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMAENIRFYNFGWEDMTTPALAFMMDIVKVIASVLLTGRHKVAVHCHAGYGRTGIAIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPTIHDRFTLAETVEHQNRRLHGAGAVN 246
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A6A3FGH6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FGH6_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.710e-65 Identity = 117/246 (47.56%), Postives = 153/246 (62.20%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
+W + KCR CGG C RCSE AL + V GLHS W+ D + M RPSSRL+ Y I QF++ +TA+FNLT PGEHP+CGDGL SGFPY PE M + I YNF WEDMTTP+++ + DI++V S L TG ++AVHCHAGYGRTG+ IA L+ ++N+PP+ A+ VR RP S+QT Q V V +F ++ RVV+ H R TL + + Q LHG+ +VN
Sbjct: 9 EWEKTLKVKCRLCGGARCKRCSESAALAKSDSPVRGLHSDWVADYALAMMRPSSRLMNEYKIAEQFQKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAQNIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPKVHDRFTLAETVEHQNRRLHGEGAVN 246
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: K3WRR2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRR2_GLOUD) HSP 1 Score: 230 bits (587), Expect = 1.140e-64 Identity = 122/252 (48.41%), Postives = 162/252 (64.29%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQAFLLHGQESVNLRW-LPK 1353
+W KCR CGG C RCSE AL + V GLH+ W+ + I+GM RPSSRL+K Y I QF++ ++A+FNLT PGEHP+CGDGL SGFPY PE M E I YNF WEDMTTP++ + DI++V S L+ G KI+VHCHAGYGRTGL IA +L+ M+N+PP+QA+ VR RP S+QT+AQA+ V E+ N + V + + DH T+ + + Q ++HG++S R LPK
Sbjct: 9 EWEKTLTVKCRLCGGAKCKRCSESAALAKTNSPVLGLHADWVTNRILGMMRPSSRLMKDYQIAQQFQKLRISAVFNLTLPGEHPYCGDGLA-ASGFPYDPEKDLMVENIHFYNFGWEDMTTPTLPFMMDIVKVMASILQDGHQKISVHCHAGYGRTGLAIACVLIFMHNIPPEQAIKIVRRDRPGSIQTSAQAK----FVRSFHEYINTSKVVFALPYIHDH--FTIAEMIEHQNRMVHGEKSSGTRVALPK 253
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A835ZAS9_9STRA (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS9_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.610e-64 Identity = 124/233 (53.22%), Postives = 147/233 (63.09%), Query Frame = 1
Query: 784 YDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVRE----------------------------KRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQAFLLHGQESVNLRWLPKAVALATRMLVILGEG 1398
Y ++ +FK G+T + NLTEPGEHPHCGDGLE +SGFPYLPET M GI NF+WEDMTTP +ALL++I+RV +S + GGK AVHCHAGYGRTGLVIAS LV NL +AVA VR KRP S+QT AQ +V FA FVR RVVYHF++HA VTLGQ+L QQ+FLL G LRW+P+ +ALA RML L G
Sbjct: 46 YGLMDKFKAAGITVVLNLTEPGEHPHCGDGLEASSGFPYLPETLMAAGIQFVNFAWEDMTTPPLALLANIVRVLVSHVGLGGKAAVHCHAGYGRTGLVIASSLVYSQNLTADEAVAIVRSILVRVSSALSRPNECMRTCVIGHSAPSRKRPGSVQTPAQQD-------IVARFAEFVRETRVVYHFSEHATVTLGQYLQQQSFLL-GPGDTALRWVPRPIALAARMLQALSAG 270
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: W2R319_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2R319_PHYPN) HSP 1 Score: 229 bits (583), Expect = 8.790e-64 Identity = 119/246 (48.37%), Postives = 154/246 (62.60%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
+W + KCR CGG C RCSE AL + + V GLH+ W+ D + M RPSSRL+ Y I QF + +TA+FNLT PGEHP+CGDGL TSGFPY PE M E I YNF WEDMTTP+++ + DI++V S L TG K+AVHCHAGYGRTG+ IA L+ ++N+PP+ A+ VR RP S+QT Q V V +F ++ RVV+ H R TL + + Q LHG+ +VN
Sbjct: 9 EWEKTLKVKCRLCGGIRCKRCSESAALAKQDSPVKGLHADWVVDCALAMMRPSSRLMNEYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHKVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPKIHDRFTLAETVEHQNRRLHGEGAVN 246
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: F0W109_9STRA (Uncharacterized protein AlNc14C5G789 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W109_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.920e-63 Identity = 120/256 (46.88%), Postives = 156/256 (60.94%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGK----------------IAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHG 1320
+W K KCRFCGG C RCSE AL + ++GLH+ W+ D I+GM RPSSRLIK Y I+ QF R +TA+FNLT PGEHP CGDGL +SGFPY PE FM + I YNF WEDMT P+++L+ DI++V S L+ G + +AVHCHAGYGRTGL IA L+ M+ + P++A+ VR RP S+QT +QA + V EF ++ R+ + H TL Q + QQ L+HG
Sbjct: 9 EWEQKLTIKCRFCGGPQCKRCSEHAALAKIDSPISGLHADWVTDRILGMMRPSSRLIKQYHIIDQFHRHRITAVFNLTIPGEHPFCGDGLG-SSGFPYDPEIDFMAQKIQFYNFGWEDMTVPTLSLMMDIVKVMTSMLQDGMQKVGAVFIPSKVLNFCQVAVHCHAGYGRTGLAIACALIFMHGISPERAIHIVRRDRPGSIQTPSQA-------IFVREFCEYMSCARLTFALPFIHEPFTLSQAIEQQNRLIHG 256
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: G5AEU0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AEU0_PHYSP) HSP 1 Score: 224 bits (570), Expect = 3.830e-63 Identity = 116/246 (47.15%), Postives = 152/246 (61.79%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
+W + KCR CGG C RCSE AL + V GLH+ W+ D + M RPSSRL+ Y I QF + +TA+FNLT PGEHP+CGDGL SGFPY PE M E I YNF WEDMTTP+++ + DI++V S L TG ++AVHCHAGYGRTG+ IA L+ ++N+PP+ A+ VR RP S+QT QA+ V +F ++ RVV+ H TL + + Q LHG+ +VN
Sbjct: 9 EWEKTLKVKCRLCGGARCKRCSESAALAKTDSPVRGLHADWVADCALAMMRPSSRLMSKYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQAQ-------FVHDFHAYLNAARVVFALPKIHDLFTLAETVEHQNRRLHGEGAVN 246
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A225X029_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X029_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.750e-63 Identity = 115/246 (46.75%), Postives = 152/246 (61.79%), Query Frame = 1
Query: 607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTG-GKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
+W + KCR CGG C RCSE AL + + V GLH+ W+ D + M RPSSRL+ Y I QF + +TA+FNLT PGEHP+CGDGL SGFPY PE M E I YNF WEDMTTP+++ + DI++V S L TG ++AVHCHAGYGRTG+ IA L+ ++N+PP+ A+ VR RP S+QT Q + V +F ++ RVV+ H R TL + + Q LHG+ + N
Sbjct: 9 EWEKSLKVKCRLCGGARCKRCSESAALAKQDSPVKGLHADWVADCALAMMRPSSRLMSEYRIAEQFHKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMVDIVKVIASVLLTGQDRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQTQ-------FVYDFHAYLNTARVVFALPKIHDRFTLAETVEHQNRRLHGENATN 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10549.514.1 >prot_Ecto-sp13_S_contig10549.514.1 ID=prot_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp MTDGAAQSKGVLPMEAKNAAKHSPCAPQGTPIGPTNSVGEGEAVGATSGSback to top mRNA from alignment at Ecto-sp13_S_contig10549:715..5448+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10549.514.1 ID=mRNA_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4734bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10549:715..5448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10549:715..5448+ >mRNA_Ecto-sp13_S_contig10549.514.1 ID=mRNA_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10549:715..5448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |