mRNA_Ecto-sp13_S_contig10549.514.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10549.514.1
Unique NamemRNA_Ecto-sp13_S_contig10549.514.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: D7FL27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL27_ECTSI)

HSP 1 Score: 734 bits (1895), Expect = 3.800e-260
Identity = 379/434 (87.33%), Postives = 391/434 (90.09%), Query Frame = 1
Query:    1 MTDGAAQSKGVLPMEAKNAAKHSPCAPQGTPIGPTNSVGEGEAVGATSGSSTAGSCPAADDAVGVTSEQLIGGADGTAGATANEDTTGVLGEHGDGIGRDGKAVGFVRLIPGDENNSGRVGEQHSSSDCQKDVDGAAVDAASNTRPNLGGLGKSAGHVVERSKEAQDTVAVKAGVSQLPVRSERMGPQVSKAAPAAGGTRKGQWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ 1302
            M DGAAQSKG+LPMEAKNAAK  PCAPQG PI PTNSVGE   VGATSGSSTAG C AADD VG  + QL GGA+GTA   AN+DTTGV GE+GDG+GRDGKAV FV+L PG ENNSG +GE+HSSSDCQKD +GAAVDAA NTRPN  GLGKS+GHVV+RS EAQD VAVKAGVSQLPVRSE MG QVSKAAPAAGGTRKGQW FKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWI DSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEK SGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVA VREKRPTSLQTNAQ       V MVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ
Sbjct:    1 MMDGAAQSKGILPMEAKNAAKPGPCAPQGAPIEPTNSVGE---VGATSGSSTAGGCAAADDVVGANAGQLTGGAEGTARVAANKDTTGVAGENGDGVGRDGKAVCFVKLNPGAENNSGHIGEEHSSSDCQKDAEGAAVDAALNTRPNTDGLGKSSGHVVDRSNEAQDAVAVKAGVSQLPVRSENMGSQVSKAAPAAGGTRKGQWTFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWISDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKASGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVALVREKRPTSLQTNAQ-------VSMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQ 424          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A024G075_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G075_9STRA)

HSP 1 Score: 231 bits (590), Expect = 3.050e-66
Identity = 121/240 (50.42%), Postives = 152/240 (63.33%), Query Frame = 1
Query:  610 WAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTG-GKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHG 1320
            W  K   KCRFCGG  C RCSE  AL    + + GLH+ WI D I+GM RPSSRLIK Y I  QF R  +TA+FNLT PGEHP CGDGL  +SGFPY PE  FM + I  YNF WEDMT P ++L+ DI++V  S L+ G  K+AVHCHAGYGRTGL IA +L+ M+ + P++A+  VR  RP S+QT+ QA         V EF  ++   +V +     H   T+ Q + QQ  L+HG
Sbjct:   10 WEQKLTIKCRFCGGPQCKRCSENAALAKTDSPIPGLHADWITDRILGMMRPSSRLIKQYQITDQFHRHHITAVFNLTIPGEHPFCGDGLG-SSGFPYDPENDFMAQKIQFYNFGWEDMTVPPLSLMMDIVKVMTSMLQDGMQKVAVHCHAGYGRTGLAIACVLLFMHGISPERAIHIVRRDRPGSIQTSGQA-------TFVHEFCEYMNSAKVTFALPFIHEPFTIAQAIEQQNRLMHG 241          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: D0MYX7_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYX7_PHYIT)

HSP 1 Score: 231 bits (589), Expect = 4.680e-65
Identity = 121/246 (49.19%), Postives = 154/246 (62.60%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHF-TDHARVTLGQHLAQQAFLLHGQESVN 1335
            +W    + KCR CGG  C RCSE  AL  + + V GLH+ W+ D  + M RPSSRL+  Y I  QF +  +TA+FNLT PGEHP+CGDGL  TSGFPY PE   M E I  YNF WEDMTTP++A + DI++V  S L TG  K+AVHCHAGYGRTG+ IA  L+ ++N+PP+ A+  VR  RP S+QT  Q       V  V +F  ++   RVV+   T H R TL + +  Q   LHG  +VN
Sbjct:    9 EWEKTLKVKCRLCGGLRCKRCSESAALAKQDSPVKGLHADWVADCALAMMRPSSRLMNEYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMAENIRFYNFGWEDMTTPALAFMMDIVKVIASVLLTGRHKVAVHCHAGYGRTGIAIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPTIHDRFTLAETVEHQNRRLHGAGAVN 246          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A6A3FGH6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FGH6_9STRA)

HSP 1 Score: 226 bits (577), Expect = 5.710e-65
Identity = 117/246 (47.56%), Postives = 153/246 (62.20%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
            +W    + KCR CGG  C RCSE  AL    + V GLHS W+ D  + M RPSSRL+  Y I  QF++  +TA+FNLT PGEHP+CGDGL   SGFPY PE   M + I  YNF WEDMTTP+++ + DI++V  S L TG  ++AVHCHAGYGRTG+ IA  L+ ++N+PP+ A+  VR  RP S+QT  Q       V  V +F  ++   RVV+     H R TL + +  Q   LHG+ +VN
Sbjct:    9 EWEKTLKVKCRLCGGARCKRCSESAALAKSDSPVRGLHSDWVADYALAMMRPSSRLMNEYKIAEQFQKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAQNIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPKVHDRFTLAETVEHQNRRLHGEGAVN 246          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: K3WRR2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRR2_GLOUD)

HSP 1 Score: 230 bits (587), Expect = 1.140e-64
Identity = 122/252 (48.41%), Postives = 162/252 (64.29%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQAFLLHGQESVNLRW-LPK 1353
            +W      KCR CGG  C RCSE  AL    + V GLH+ W+ + I+GM RPSSRL+K Y I  QF++  ++A+FNLT PGEHP+CGDGL   SGFPY PE   M E I  YNF WEDMTTP++  + DI++V  S L+ G  KI+VHCHAGYGRTGL IA +L+ M+N+PP+QA+  VR  RP S+QT+AQA+     V    E+ N  + V  + +  DH   T+ + +  Q  ++HG++S   R  LPK
Sbjct:    9 EWEKTLTVKCRLCGGAKCKRCSESAALAKTNSPVLGLHADWVTNRILGMMRPSSRLMKDYQIAQQFQKLRISAVFNLTLPGEHPYCGDGLA-ASGFPYDPEKDLMVENIHFYNFGWEDMTTPTLPFMMDIVKVMASILQDGHQKISVHCHAGYGRTGLAIACVLIFMHNIPPEQAIKIVRRDRPGSIQTSAQAK----FVRSFHEYINTSKVVFALPYIHDH--FTIAEMIEHQNRMVHGEKSSGTRVALPK 253          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A835ZAS9_9STRA (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS9_9STRA)

HSP 1 Score: 231 bits (589), Expect = 2.610e-64
Identity = 124/233 (53.22%), Postives = 147/233 (63.09%), Query Frame = 1
Query:  784 YDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVRE----------------------------KRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQAFLLHGQESVNLRWLPKAVALATRMLVILGEG 1398
            Y ++ +FK  G+T + NLTEPGEHPHCGDGLE +SGFPYLPET M  GI   NF+WEDMTTP +ALL++I+RV +S +  GGK AVHCHAGYGRTGLVIAS LV   NL   +AVA VR                             KRP S+QT AQ         +V  FA FVR  RVVYHF++HA VTLGQ+L QQ+FLL G     LRW+P+ +ALA RML  L  G
Sbjct:   46 YGLMDKFKAAGITVVLNLTEPGEHPHCGDGLEASSGFPYLPETLMAAGIQFVNFAWEDMTTPPLALLANIVRVLVSHVGLGGKAAVHCHAGYGRTGLVIASSLVYSQNLTADEAVAIVRSILVRVSSALSRPNECMRTCVIGHSAPSRKRPGSVQTPAQQD-------IVARFAEFVRETRVVYHFSEHATVTLGQYLQQQSFLL-GPGDTALRWVPRPIALAARMLQALSAG 270          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: W2R319_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2R319_PHYPN)

HSP 1 Score: 229 bits (583), Expect = 8.790e-64
Identity = 119/246 (48.37%), Postives = 154/246 (62.60%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
            +W    + KCR CGG  C RCSE  AL  + + V GLH+ W+ D  + M RPSSRL+  Y I  QF +  +TA+FNLT PGEHP+CGDGL  TSGFPY PE   M E I  YNF WEDMTTP+++ + DI++V  S L TG  K+AVHCHAGYGRTG+ IA  L+ ++N+PP+ A+  VR  RP S+QT  Q       V  V +F  ++   RVV+     H R TL + +  Q   LHG+ +VN
Sbjct:    9 EWEKTLKVKCRLCGGIRCKRCSESAALAKQDSPVKGLHADWVVDCALAMMRPSSRLMNEYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLG-TSGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHKVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQ-------VQFVHDFHAYLNAARVVFALPKIHDRFTLAETVEHQNRRLHGEGAVN 246          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: F0W109_9STRA (Uncharacterized protein AlNc14C5G789 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W109_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.920e-63
Identity = 120/256 (46.88%), Postives = 156/256 (60.94%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGK----------------IAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHG 1320
            +W  K   KCRFCGG  C RCSE  AL    + ++GLH+ W+ D I+GM RPSSRLIK Y I+ QF R  +TA+FNLT PGEHP CGDGL  +SGFPY PE  FM + I  YNF WEDMT P+++L+ DI++V  S L+ G +                +AVHCHAGYGRTGL IA  L+ M+ + P++A+  VR  RP S+QT +QA       + V EF  ++   R+ +     H   TL Q + QQ  L+HG
Sbjct:    9 EWEQKLTIKCRFCGGPQCKRCSEHAALAKIDSPISGLHADWVTDRILGMMRPSSRLIKQYHIIDQFHRHRITAVFNLTIPGEHPFCGDGLG-SSGFPYDPEIDFMAQKIQFYNFGWEDMTVPTLSLMMDIVKVMTSMLQDGMQKVGAVFIPSKVLNFCQVAVHCHAGYGRTGLAIACALIFMHGISPERAIHIVRRDRPGSIQTPSQA-------IFVREFCEYMSCARLTFALPFIHEPFTLSQAIEQQNRLIHG 256          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: G5AEU0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AEU0_PHYSP)

HSP 1 Score: 224 bits (570), Expect = 3.830e-63
Identity = 116/246 (47.15%), Postives = 152/246 (61.79%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGG-KIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
            +W    + KCR CGG  C RCSE  AL    + V GLH+ W+ D  + M RPSSRL+  Y I  QF +  +TA+FNLT PGEHP+CGDGL   SGFPY PE   M E I  YNF WEDMTTP+++ + DI++V  S L TG  ++AVHCHAGYGRTG+ IA  L+ ++N+PP+ A+  VR  RP S+QT  QA+        V +F  ++   RVV+     H   TL + +  Q   LHG+ +VN
Sbjct:    9 EWEKTLKVKCRLCGGARCKRCSESAALAKTDSPVRGLHADWVADCALAMMRPSSRLMSKYKIAEQFHKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMMDIVKVIASVLLTGHHRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQAQ-------FVHDFHAYLNAARVVFALPKIHDLFTLAETVEHQNRRLHGEGAVN 246          
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Match: A0A225X029_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X029_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.750e-63
Identity = 115/246 (46.75%), Postives = 152/246 (61.79%), Query Frame = 1
Query:  607 QWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIGMQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPYLPET-FMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTG-GKIAVHCHAGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLVLMVGEFANFVRGVRVVYHFTD-HARVTLGQHLAQQAFLLHGQESVN 1335
            +W    + KCR CGG  C RCSE  AL  + + V GLH+ W+ D  + M RPSSRL+  Y I  QF +  +TA+FNLT PGEHP+CGDGL   SGFPY PE   M E I  YNF WEDMTTP+++ + DI++V  S L TG  ++AVHCHAGYGRTG+ IA  L+ ++N+PP+ A+  VR  RP S+QT  Q +        V +F  ++   RVV+     H R TL + +  Q   LHG+ + N
Sbjct:    9 EWEKSLKVKCRLCGGARCKRCSESAALAKQDSPVKGLHADWVADCALAMMRPSSRLMSEYRIAEQFHKLNITAVFNLTLPGEHPYCGDGLGP-SGFPYDPEKDLMAENIRFYNFGWEDMTTPTLSFMVDIVKVIASVLLTGQDRVAVHCHAGYGRTGITIACALIFLHNIPPELAIRLVRRDRPGSVQTAGQTQ-------FVYDFHAYLNTARVVFALPKIHDRFTLAETVEHQNRRLHGENATN 246          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10549.514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL27_ECTSI3.800e-26087.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024G075_9STRA3.050e-6650.42Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
D0MYX7_PHYIT4.680e-6549.19Uncharacterized protein n=3 Tax=Phytophthora infes... [more]
A0A6A3FGH6_9STRA5.710e-6547.56Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K3WRR2_GLOUD1.140e-6448.41Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A835ZAS9_9STRA2.610e-6453.22TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
W2R319_PHYPN8.790e-6448.37Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
F0W109_9STRA1.920e-6346.88Uncharacterized protein AlNc14C5G789 n=1 Tax=Albug... [more]
G5AEU0_PHYSP3.830e-6347.15Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225X029_9STRA5.750e-6346.75Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10549contigEcto-sp13_S_contig10549:715..5448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score742.3
Seed ortholog evalue1.4e-211
Seed eggNOG ortholog2880.D7FL27
Preferred namePTPDC1
Model size1407
KEGG koko:K18078
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0031974,GO:0031981,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044782,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060271,GO:0065007,GO:0070013,GO:0070925,GO:0071704,GO:0071840,GO:0120031,GO:0120036,GO:0140096,GO:1901564
Exons9
EggNOG free text desc.protein tyrosine/serine/threonine phosphatase activity
EggNOG OGsCOG2453@1,KOG1720@2759
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-05_006980.1
Cds size1407
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10549.514.1prot_Ecto-sp13_S_contig10549.514.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10549 715..5448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462537.7820377-CDS-Ecto-sp13_S_contig10549:714..12121681462537.7820377-CDS-Ecto-sp13_S_contig10549:714..1212Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 715..1212 +
1681462537.8019178-CDS-Ecto-sp13_S_contig10549:1565..16941681462537.8019178-CDS-Ecto-sp13_S_contig10549:1565..1694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 1566..1694 +
1681462537.813267-CDS-Ecto-sp13_S_contig10549:2324..24021681462537.813267-CDS-Ecto-sp13_S_contig10549:2324..2402Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 2325..2402 +
1681462537.8226762-CDS-Ecto-sp13_S_contig10549:2859..29631681462537.8226762-CDS-Ecto-sp13_S_contig10549:2859..2963Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 2860..2963 +
1681462537.8325427-CDS-Ecto-sp13_S_contig10549:3662..37811681462537.8325427-CDS-Ecto-sp13_S_contig10549:3662..3781Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 3663..3781 +
1681462537.8416939-CDS-Ecto-sp13_S_contig10549:4204..43081681462537.8416939-CDS-Ecto-sp13_S_contig10549:4204..4308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 4205..4308 +
1681462537.8508346-CDS-Ecto-sp13_S_contig10549:4540..47051681462537.8508346-CDS-Ecto-sp13_S_contig10549:4540..4705Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 4541..4705 +
1681462537.8606186-CDS-Ecto-sp13_S_contig10549:4892..49971681462537.8606186-CDS-Ecto-sp13_S_contig10549:4892..4997Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 4893..4997 +
1681462537.8684776-CDS-Ecto-sp13_S_contig10549:5343..54481681462537.8684776-CDS-Ecto-sp13_S_contig10549:5343..5448Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10549 5344..5448 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10549.514.1

>prot_Ecto-sp13_S_contig10549.514.1 ID=prot_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp
MTDGAAQSKGVLPMEAKNAAKHSPCAPQGTPIGPTNSVGEGEAVGATSGS
STAGSCPAADDAVGVTSEQLIGGADGTAGATANEDTTGVLGEHGDGIGRD
GKAVGFVRLIPGDENNSGRVGEQHSSSDCQKDVDGAAVDAASNTRPNLGG
LGKSAGHVVERSKEAQDTVAVKAGVSQLPVRSERMGPQVSKAAPAAGGTR
KGQWAFKNQTKCRFCGGRLCLRCSEQCALRCKGAAVNGLHSHWICDSIIG
MQRPSSRLIKTYDIVGQFKRKGVTAIFNLTEPGEHPHCGDGLEKTSGFPY
LPETFMREGISVYNFSWEDMTTPSMALLSDIIRVALSCLRTGGKIAVHCH
AGYGRTGLVIASILVMMNNLPPQQAVARVREKRPTSLQTNAQAREHSLLV
LMVGEFANFVRGVRVVYHFTDHARVTLGQHLAQQAFLLHGQESVNLRWLP
KAVALATRMLVILGEGKI*
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mRNA from alignment at Ecto-sp13_S_contig10549:715..5448+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10549.514.1 ID=mRNA_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4734bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10549:715..5448+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGGACGGGGCGGCACAGTCCAAGGGAGTCCTTCCCATGGAAGCCAA AAATGCTGCCAAACATAGTCCTTGCGCACCTCAGGGGACTCCCATCGGGC CTACCAACAGTGTGGGGGAGGGCGAGGCAGTCGGAGCTACCAGTGGTAGT TCGACCGCAGGCAGTTGCCCTGCTGCTGATGATGCCGTGGGAGTCACTAG TGAGCAGCTAATAGGTGGCGCTGACGGCACTGCTGGTGCGACCGCAAACG AGGATACTACGGGTGTGCTAGGGGAACATGGTGATGGGATAGGTCGAGAT GGAAAAGCGGTGGGTTTTGTCAGGCTTATCCCGGGAGACGAAAACAACTC CGGACGCGTCGGCGAACAGCACAGCAGCAGCGATTGTCAAAAGGATGTTG ATGGTGCTGCTGTTGATGCGGCTTCGAATACGCGGCCAAACCTTGGTGGG CTCGGCAAATCGGCTGGACACGTAGTTGAGCGATCGAAGGAAGCCCAGGT AAGGATGGCGGGTTTCACACGAGGGAAACCACCGACACTACAGAGATACA CACGGCTGGAAGTGTTGTGTGCGGAAGTTTATTGTACTGGGGTCTACATG TAGTCTTTTTGGAGGACTCTTTACTAGTCTACACGATGAAGCTGTGGTCG AGCCTGAGAGGCGCTGTGTAAGACACCCGTACACAAATAAAATTCCATAT TGGGGACGCTGAAGCGTGCATGAAAGGCAACGGCAGTGGTATGTTCCTCG CAGTTCACAGAAATCAAGGACATGCAAACAGGTCGGACACGTTTGAAAAG GTATTCTACACCTGAGCCAAGTAGTTGCTGCACTACCGCTATCTCTGTTA GGATACGGTGGCTGTCAAGGCTGGGGTGTCTCAGCTGCCCGTGAGATCAG AAAGAATGGGCCCACAAGTTTCTAAGGCCGCACCTGCGGCAGGAGGAACG CGCAAGGGTCAATGGGCGTTCAAGAACCAGGTGCGCCAGAATGCACGTTG CTATCATGGCTGCTTTCTGCGTTCCCTTCTTTCGTTCGAGCATCCCGTTT GCACACACACATATGCATTCGCACCAACCCCACTCTAGTTCCTGGGAGCT CCGTGTGTTAATCCAAACCAGGTATGGATTTACGCAAAACAGACACACAC GCACATCCGCAGCCACCACTACCTACTCGTGCTTTCCGGGCATGAACGTT GTCTAGCATTTGACAGATAGATGCTGCTTCGAGGTGCTGGAACACTGTCA ACGACGTTCGGGAATCTCTTTCTGTGATCGAAAAAGCGTTCGTGGTGCGA GAATGGAATTGCTACCCGTTCCTCGCCTCGCTTCACCGCCGGTACCGTGC CATCTCGGGCAAATACTTCCGATCTGTATGATACTGCTCATGAGGGCATT CAGGTTCCGAAACGAAAACGCTAGTAGGCCCTTCAAAATTTATTTTTTCA ATTTTTCCTCTAAATATTAAACTCAGTGTAGAGTCCAGCTCAAACCGTCG ATCACCGATTACTCCACTGCTCCGCACTTGTCTGCAGAGACCTGCATCCA ACCAACATGTAAAAGCCTCAATTGGTTCTCCTATGCTTCCCTCTGATATG ACTGGAACAGACGAAATGCAGGTTTTGCGGTGGTAGGCTTTGCCTCAGAT GCTCGGAGCAATGCGCGCTGAGATGCAAGGGAGCCGCAGTAAGTCAACAC ACGTCGTTACGAGCTCTTTAGAAAAGATTCAGAGCTGTGTTGGACGGTAG AACAGTGCGCGAAATGTGTTACACAATGAAAAGTTAGGGCTAGGCTCTTC GTGCTGGCGTTGGGTACGCGCACTTCACCCATCGCCCAGGCCAATAAATT ACGTCCGCACGGGACATAGTCTCAAATTCTGAAGGTACAACGCGAAAATA CCATGAGCGGATTGCGAGGAATAGCATAGGCCCTCAAATCGGTGTCCCTG AGACACACTGCCATTGGTCGCAAGAGACTGAAGTGGCTCTCAAGGAAACA AGAAAGGTATATGAAAAGGTATCGATACCATTCATTGCCCTGTAAGGTCC TCATGTACATGTGGATAAGCGAAGATGCTATCCACTGTGAGCATCTGATG TGGTAGACTGACCTGTTCAAGAAATGCGATCTCTTGGCTTGTAAGGTCAA TGGGCTGCATTCTCACTGGATATGCGACTCCATCATTGGCATGCAGAGGC CCAGCAGCCGCCTGATTAAGACGTACGACATTGTCGGCCAGTTCAAGCGG TAAGAGAAGCCCTCAAGGAGGGCAATCAGGCTTGGTGGTGCCGGAGAACG TACCGAAAAGTGCCGCGCATCGCGCGGCAGACCAAGGGTATCTTCTTTCT TTCCTCGGCATCGTTTCGGGAAGGTTTTGCGTGGGCCAGGAGTTGCTATG CTTGACCGCTTTTGTCATGGACACGCGACCGAATACCCGCATAGTCACAG TTTCGAGAAAAAGGGATTCCGAAGTTGTATCGGCTACTGAGAGACTCTCC CCGGTGTCTCTGCTCGAACACTTCTTTGGGAGTTCATCTATCGTTCCTTG TAGATCGGGCAACTCCAACAGATTTGTCACGCTGCACTCTTCCCCGCCCG TGAAGGTTAAATTCAGAGACCGACGAAGGTCTACGTCTCGAAATTGCTAG GGAGAAGCCCTCGTTGCGGCGATGGTTGGACTTTCCAGTCGGTAAACGAT GGAAGAGGGCAAATTCTTATGGGTGAAGTTGATTGCACCATGTATTGGTT TGTGCCATTGTCATTGTCATGGTGTTCGCGGCGTGACATTGATAACTGCA CCCTGCAAGAATTTGGGTCCTCCACCTTCATGTTTATCTTAGGGTTAAGC TTCCGATAAGGGTTTGTCATGTAGAGATCAATCACAGCGCTTGCTTTCAA GCCATCTCGAGCAACGTTATGAGCGTTTTCTGCGCCTTTTGTTGTCAGGA AGGGGGTGACGGCCATTTTTAACCTCACGGAGCCGGGGGAGCACCCTCAT TGTGGAGACGGGCTGGAAAAGACCAGTGGCTTTCCGTACTTGCCCGAAAC CTTCATGCGAGAAGGCAGTAAGTGCTGCAGCACTAGGGACAGATTGCTGT AGTTGGCGGCGTGGGCAGTCATGCAAACGTCAGTCGGTACACTATAAACG AGAAGGAAAATGAAGGAACACTGTATGTACCTGAAAAAACATCTAGGGAG TGATAACCCTGTTTTTTTTTGCTGTCCACTGACTGATAAATAGCAACAAT TCATCGAGTTTTCCATGATTTTTCATGGGGTTGTACACTGAAAGCTTCTT TCTCCCCCCCCATTCCGCGCAGGAATATAGATCTGAATGTATCATCCTCC GCTCGGTGTCTCGATATCTCTATGATACGCGTTCTTGTTCATGCTCAGTT GGGGAATCATGACGTCAACAACGTTTGTACATCGATTCCCGTTTCCCACT TGCGTAAACCGCTGTTTTGTTCAACACAACGCCCCCCAAGTCTCCGTGTA CAACTTTTCTTGGGAGGACATGACGACGCCATCGATGGCACTTCTTTCGG ACATCATCCGAGTAGCGCTGTCCTGCCTTCGGACAGGGGGCAAGGTGAAC GCTCGCTCAACCACGCCAAACTGCTCATGGTAGGAGTCTGCAAGGTTGCG AAGGTTGTTGCTGAACCACAGTATTCGATCTCAAGCGTACAGCACTGACG TTGGCAAGCAAGAGATATGGTTGGTCTGAACCGATTCTCTACGGTTAGCT CCGATTGCAGTTCGTTGTCCACTCCTTCAAAACGCCACCGCACATTGCAT GTCAATTCCACGTTTTTATTGCTCAGATCGCCGTACATTGCCACGCTGGC TACGGCCGAACGGGCCTCGTGATCGCGAGTATCTTGGTGATGATGAACAA TCTCCCCCCGCAGCAAGCCGTTGCTCGTGTCAGGGAGAAGAGGCCCACTT CTTTGCAGACGAACGCCCAGGCAAGAGAACATTCGCTTTTGGTTGTGGTT TTGTTGTTTACCGAGGGCACGTCGAACTTGTATGAACGAACGCGGGAATC GAACCACTGCCCAACACCAACTACCCGTCACACCACAGCAGTAGCTCAAT GATTCAGGAGGGCTAGCGTTAGGTGAAGGACTTCCCGGAGCGCATGGTTA CGCCCCTCTCCACTTGCGTGATCAACAGGTCTTGATGGTGGGAGAATTCG CCAACTTTGTGCGCGGTGTTCGGGTGGTGTATCACTTCACGGACCATGCC AGGGTGACGCTCGGGCAGCATCTTGCACAGCAGGTGGGGTGCCGTCTGAC AACGTCCAGAGCCCATTCATTCCACGTCTTTCGCCGTTTAAAATTGAATA ATTTGAGTGACCTTTAGGTTTTGATTCCTCCCTGTTCTGGTCACAAGCAG CGACCATTCACGCTGCTGCGCTGTGGCGACGAGTCGACTACGCCTACTTT TTATAATAGCATAGCCATCTACAAGAACAATGACTTGTGTGCTGCAAAGA GTCAGCTCCACGAGCTTACGGTTACAACGGAATCCATCAACACGAGGACA GCACCTCTTGGACGTTATAGCATGTTCCACAACACGAAGGGTACAAAGCC AGCCCCGTTCATCAAACCCCGCACCTCAGGCATTCCTCCTGCATGGACAG GAGAGCGTAAACCTCCGCTGGCTACCTAAGGCTGTTGCCTTGGCCACCAG AATGCTCGTGATTCTTGGTGAGGGGAAGATTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10549:715..5448+

>mRNA_Ecto-sp13_S_contig10549.514.1 ID=mRNA_Ecto-sp13_S_contig10549.514.1|Name=mRNA_Ecto-sp13_S_contig10549.514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10549:715..5448+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGGACGGGGCGGCACAGTCCAAGGGAGTCCTTCCCATGGAAGCCAA
AAATGCTGCCAAACATAGTCCTTGCGCACCTCAGGGGACTCCCATCGGGC
CTACCAACAGTGTGGGGGAGGGCGAGGCAGTCGGAGCTACCAGTGGTAGT
TCGACCGCAGGCAGTTGCCCTGCTGCTGATGATGCCGTGGGAGTCACTAG
TGAGCAGCTAATAGGTGGCGCTGACGGCACTGCTGGTGCGACCGCAAACG
AGGATACTACGGGTGTGCTAGGGGAACATGGTGATGGGATAGGTCGAGAT
GGAAAAGCGGTGGGTTTTGTCAGGCTTATCCCGGGAGACGAAAACAACTC
CGGACGCGTCGGCGAACAGCACAGCAGCAGCGATTGTCAAAAGGATGTTG
ATGGTGCTGCTGTTGATGCGGCTTCGAATACGCGGCCAAACCTTGGTGGG
CTCGGCAAATCGGCTGGACACGTAGTTGAGCGATCGAAGGAAGCCCAGGA
TACGGTGGCTGTCAAGGCTGGGGTGTCTCAGCTGCCCGTGAGATCAGAAA
GAATGGGCCCACAAGTTTCTAAGGCCGCACCTGCGGCAGGAGGAACGCGC
AAGGGTCAATGGGCGTTCAAGAACCAGACGAAATGCAGGTTTTGCGGTGG
TAGGCTTTGCCTCAGATGCTCGGAGCAATGCGCGCTGAGATGCAAGGGAG
CCGCAGTCAATGGGCTGCATTCTCACTGGATATGCGACTCCATCATTGGC
ATGCAGAGGCCCAGCAGCCGCCTGATTAAGACGTACGACATTGTCGGCCA
GTTCAAGCGGAAGGGGGTGACGGCCATTTTTAACCTCACGGAGCCGGGGG
AGCACCCTCATTGTGGAGACGGGCTGGAAAAGACCAGTGGCTTTCCGTAC
TTGCCCGAAACCTTCATGCGAGAAGGCATCTCCGTGTACAACTTTTCTTG
GGAGGACATGACGACGCCATCGATGGCACTTCTTTCGGACATCATCCGAG
TAGCGCTGTCCTGCCTTCGGACAGGGGGCAAGATCGCCGTACATTGCCAC
GCTGGCTACGGCCGAACGGGCCTCGTGATCGCGAGTATCTTGGTGATGAT
GAACAATCTCCCCCCGCAGCAAGCCGTTGCTCGTGTCAGGGAGAAGAGGC
CCACTTCTTTGCAGACGAACGCCCAGGCAAGAGAACATTCGCTTTTGGTC
TTGATGGTGGGAGAATTCGCCAACTTTGTGCGCGGTGTTCGGGTGGTGTA
TCACTTCACGGACCATGCCAGGGTGACGCTCGGGCAGCATCTTGCACAGC
AGGCATTCCTCCTGCATGGACAGGAGAGCGTAAACCTCCGCTGGCTACCT
AAGGCTGTTGCCTTGGCCACCAGAATGCTCGTGATTCTTGGTGAGGGGAA
GATTTGA
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