mRNA_Ecto-sp13_S_contig10543.511.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10543.511.1
Unique NamemRNA_Ecto-sp13_S_contig10543.511.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 550 bits (1416), Expect = 9.080e-189
Identity = 300/330 (90.91%), Postives = 308/330 (93.33%), Query Frame = 3
Query:   24 GTHDVNVRRPH*RGAAAQRVTSAAMCGRNQALHKAQGQGTVTDNTPMNKPETRHRQHHPINKQAERGPSSTGNVPSKERRRHPQTIVLKKSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKK-GSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 1010
            GT  VNV+RPH RGAAAQRVTSAAMC RNQALHKAQG+GTVTDNTPMNKPETRHRQHHP+NK AERGPSSTGNVPSKERRRHPQTIVLKKSCDFCFKRRKRCDGRAQRRCSFC+EKGRPECHYSMRSLPS S KTPTVVP SGEEDA RDDSP  GLSL A AEVD++ NADTGAQHTAKK GSG AVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLS+ATESI+RGAMVSVMRANNVL QQGA TPARPXXXXXXXXXXXXX TEE PVSSV TEE CWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV
Sbjct:   13 GTQHVNVQRPHQRGAAAQRVTSAAMCRRNQALHKAQGRGTVTDNTPMNKPETRHRQHHPMNKPAERGPSSTGNVPSKERRRHPQTIVLKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKS-KTPTVVPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADTGAQHTAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRANNVLIQQGATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEEACWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 341          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 3.770e-141
Identity = 223/285 (78.25%), Postives = 235/285 (82.46%), Query Frame = 3
Query:  414 MSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKK-GSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGGNEGRFLV-AKAGCSRLSSQCWTPFSIGYFDRNPSRSPFESCCSRRNKSAIPVPTSIFLVLCSNELYA*PSSIAEQQVQRYVHL 1262
            MSS+TPTVVP SGEEDA RDDSPPTG+S WA AE D++ NADTG Q TAKK GS  AVGVTGLVLPFKRAR+SASPATGLAGLLENELLG+FFGCLGFLS+ATESIVRGAMVSVMRA+N LNQ+GA TPARP              TEEAP SSV TEE CWR AVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGGN    L   K G   +S QCWTPFSIGY  RNPSR PFESCC RRNKSA P+PT +FLVLCSNELYA PSSIAEQQVQRYVHL
Sbjct:    1 MSSETPTVVPASGEEDAVRDDSPPTGVSFWAGAEADNDANADTGTQPTAKKKGSETAVGVTGLVLPFKRARISASPATGLAGLLENELLGEFFGCLGFLSLATESIVRGAMVSVMRASNGLNQRGATTPARPRPATDGAWLVEEDDTEEAPASSVRTEEACWRKAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGGNSNAALWWLKQGAEGMSRQCWTPFSIGYVARNPSRYPFESCCRRRNKSATPLPTPVFLVLCSNELYAWPSSIAEQQVQRYVHL 285          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5K1T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.900e-26
Identity = 67/102 (65.69%), Postives = 74/102 (72.55%), Query Frame = 3
Query:  708 SIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSS-VPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 1010
            S+  +S VRGAMVSVM+AN +LNQ+GA +   P              TE  P+SS V TEE CWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPL HV
Sbjct:   35 SVPLDSDVRGAMVSVMQAN-LLNQRGAAS-CGPSPAAARCGLAEEDDTEATPLSSSVRTEEACWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLAHV 134          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 5.980e-26
Identity = 89/246 (36.18%), Postives = 119/246 (48.37%), Query Frame = 3
Query:  291 KSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVP-ISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEET---CWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGG 1016
            KSC FC KR++ CD R  R CS C+EK +P CHY ++ LP  ++  PT    +        D S  +G +  A    +  + A  GA          ++      +  KR RLSASPATGL G+ EN  LG FFGCLG L + TES VR AMV VM     + Q G    +R               T  + +  +  +E    C   A+      LP   + C++WCAIALGAL+RG P+  V G
Sbjct:   56 KSCTFCAKRKRSCDSRRPR-CSLCIEKNQPHCHYPLKPLPKRAAAKPTAARRLXXXXXXXSDCSISSGDASKAKRLAEAHEVASYGAGSVLATVDTRSMPTVRGRMSLKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVM-----MRQCGGQAYSR---------------TGGSGMEGLAEDEEKGWCGGGALARRHT-LPDHPAKCMMWCAIALGALMRGVPVERVTG 279          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: D7FTD5_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD5_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 6.390e-25
Identity = 88/273 (32.23%), Postives = 121/273 (44.32%), Query Frame = 3
Query:  225 PSSTGNVPSKERRRHPQTIVLKKSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVPIS------GEEDAARDDSPPT-----GLSLWAAAEVDDEDNADTGAQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 1010
            P+  G+  +   ++  Q     KSC  C +R++ CD R  R CS+C+EK RP C Y ++S     ++ P  +  +      G   A R  +PP      G+ + A A       AD  +  T  +               KR RL ASPATGL G+ E+  L DFFGC G L + TES VR AMV +M         GA  P +               T  A       E+ C  +         P  A+ C++WCAIALGAL+RG P+ HV
Sbjct:   19 PAQPGHAAAAAAQQSTQLSATYKSCMLCARRKRACDSRKPR-CSYCIEKKRPYCFYRLKSATKPGAEGPPSLSSTFSASWGGVNTAMRPANPPRVASHGGVEVLATA-------ADIWSMPTVPE-----------YPSIKRCRLRASPATGLVGMKESGFLCDFFGCFGILPLTTESTVRNAMVEIM--------MGAELPRK-----RYNEEHLGVRTRWAEDEGEGEEKGCSGDRTVVRRGTQPDHAAMCMMWCAIALGALMRGVPVEHV 259          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 5.060e-24
Identity = 90/246 (36.59%), Postives = 119/246 (48.37%), Query Frame = 3
Query:  291 KSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVP-ISGEEDAARDDSPPTGLSLWAA--AEVDDEDNADTGAQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNA-VTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGG 1016
            KSC FC KR++ CD +  R CS C+EK +P CHY ++ LP  ++  P     +S    ++ D S  +G +  A   AE  +  + DTG    A   + +   V G  +  KR RLS+SPATGL G+ EN  L DFFGC G L + TES VR AMV VM     + Q G                      E+        EE  W           LP   + C++WCAIALGAL+RG  + HV G
Sbjct:   56 KSCTFCAKRKRACDSQRPR-CSLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGV-LATVNTRSMPTVRGR-MSLKRCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVM-----MRQCGG------QAYSGTGGSGMEGLAED--------EEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMG 279          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 5.820e-22
Identity = 86/254 (33.86%), Postives = 110/254 (43.31%), Query Frame = 3
Query:  291 KSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKKGSGAAVGVTGLV-----------LPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNA-VTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGG 1016
            KSC FC KR++ CD +  R    C+EK +P CHY ++ L   ++  PT             D   +      A  + +       A   A  G+G   GV   V           +  KR RLS+SPATGL G+ EN  L DFFGCLG L + TES VR AMV VM     + Q G                      E+        EE  WR          LP   + C++WCAIALGAL+RG P+  V G
Sbjct:   56 KSCTFCAKRKRACDSQKPRCRVLCIEKNQPHCHYPLKPLLKRAAAKPTAAXXXXXXXXXXSDCSISSGDASKAKRLAE-------APEVASYGTG---GVLATVDTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVM-----MRQCGG------QVYSGTGGSGMEGLAED--------EEKGWRGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTG 280          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.670e-20
Identity = 87/247 (35.22%), Postives = 114/247 (46.15%), Query Frame = 3
Query:  270 PQTIVLKKSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 1010
            P    +++SC  C +++KRCDG  Q+ C  CV  G  +C Y MR    +            + D A       G  +  +A+                   GA V  T  +LP KR RLSASPATGL G+ EN  L DFFGC+GF+ + + S +R  MV +M +   L QQ AI  A                +E   +   P    CW  A  +E   LP DASTC  WCAIALGAL +G P+  V
Sbjct:   24 PTLPGMRRSCTECGRKKKRCDG--QQPCRRCVGSG-GQCAYIMRRWHLLKPHQQQHQSQRPDRDGAH------GREVLQSAQP------------------GALV--TCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPL-QQSAIGGA---------------CSEVGTMVRAP----CWNEA--SERNQLPMDASTCTFWCAIALGALAKGSPVESV 219          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.280e-20
Identity = 81/254 (31.89%), Postives = 115/254 (45.28%), Query Frame = 3
Query:  279 IVLKKSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYSMRSLPSMSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTGAQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTED-----AALPRDASTCILWCAIALGALVRGYPLPHVGGNEG 1025
            + +++SC  C +++++CDG A   CS C+  G  +C YS R             P +  +   R    P G +   + E+              +  S  A+  +G+ LP KR RLSASPATGL G+ EN  L DFFGC+GFL + T S +RG MV +M  +   +Q GA                           S  + E C  +A+ TED     + L    S C  WCA+ +GALV G P+  VG   G
Sbjct:   16 LGMRRSCCECGRKKRKCDGMAP--CSRCLRSG-VQCTYSKRKPHQ---------PQTQHQHQRR----PRGPACMPSTEL-------------LRHSSSGALQASGM-LPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGA---------------------------SYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSG 212          
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 8.710e-17
Identity = 59/137 (43.07%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  600 VLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPXXXXXXXXXXXXXXTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHV 1010
            +LP KR RL+ASPATGL G+ EN  L DFFGC+GF+ + + S +R  MV +M +   L QQ AI  A                     V S+     CW  A  +E   LP D STC  WCAIALGAL +G P+  V
Sbjct:    1 MLPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPL-QQSAIGGAF------------------GGVGSM-VRARCWNKA--SEKPQLPMDPSTCTFWCAIALGALAKGCPVESV 115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10543.511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K678_9PHAE9.080e-18990.91Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LSE2_ECTSI3.770e-14178.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1T9_9PHAE2.900e-2665.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0W7_9PHAE5.980e-2636.18Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTD5_ECTSI6.390e-2532.23Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTE0_ECTSI5.060e-2436.59Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0K0_9PHAE5.820e-2233.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JYW4_9PHAE1.670e-2035.22Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JBJ1_9PHAE2.280e-2031.89Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU09_ECTSI8.710e-1743.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10543contigEcto-sp13_S_contig10543:1008..4479 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1264
Hectar predicted targeting categoryother localisation
Exons4
Cds size1122
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10543.511.1prot_Ecto-sp13_S_contig10543.511.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10543 1055..4384 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462537.5314295-UTR-Ecto-sp13_S_contig10543:1007..10541681462537.5314295-UTR-Ecto-sp13_S_contig10543:1007..1054Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10543 1008..1054 -
1681462537.5839002-UTR-Ecto-sp13_S_contig10543:4384..44791681462537.5839002-UTR-Ecto-sp13_S_contig10543:4384..4479Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10543 4385..4479 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462537.5422847-CDS-Ecto-sp13_S_contig10543:1054..15471681462537.5422847-CDS-Ecto-sp13_S_contig10543:1054..1547Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10543 1055..1547 -
1681462537.552091-CDS-Ecto-sp13_S_contig10543:2083..21911681462537.552091-CDS-Ecto-sp13_S_contig10543:2083..2191Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10543 2084..2191 -
1681462537.5630162-CDS-Ecto-sp13_S_contig10543:2510..27711681462537.5630162-CDS-Ecto-sp13_S_contig10543:2510..2771Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10543 2511..2771 -
1681462537.573515-CDS-Ecto-sp13_S_contig10543:4124..43841681462537.573515-CDS-Ecto-sp13_S_contig10543:4124..4384Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10543 4125..4384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10543.511.1

>prot_Ecto-sp13_S_contig10543.511.1 ID=prot_Ecto-sp13_S_contig10543.511.1|Name=mRNA_Ecto-sp13_S_contig10543.511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
MCGRNQALHKAQGQGTVTDNTPMNKPETRHRQHHPINKQAERGPSSTGNV
PSKERRRHPQTIVLKKSCDFCFKRRKRCDGRAQRRCSFCVEKGRPECHYS
MRSLPSMSSKTPTVVPISGEEDAARDDSPPTGLSLWAAAEVDDEDNADTG
AQHTAKKGSGAAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGC
LGFLSIATESIVRGAMVSVMRANNVLNQQGAITPARPPPAAAGGWLVEED
DTEEAPVSSVPTEETCWRNAVTTEDAALPRDASTCILWCAIALGALVRGY
PLPHVGGNEGRFLVAKAGCSRLSSQCWTPFSIGYFDRNPSRSPFESCCSR
RNKSAIPVPTSIFLVLCSNELYA*
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mRNA from alignment at Ecto-sp13_S_contig10543:1008..4479-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10543.511.1 ID=mRNA_Ecto-sp13_S_contig10543.511.1|Name=mRNA_Ecto-sp13_S_contig10543.511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3472bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10543:1008..4479- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGCACCTGGCACCAGGCACCAGGTACACACGATGTGAATGTACGACGA CCACACTAGAGGGGAGCAGCAGCGCAGAGGGTGACCTCGGCAGCGATGTG CGGGAGAAACCAAGCCTTGCACAAGGCACAAGGACAAGGCACCGTCACCG ATAACACCCCCATGAACAAGCCAGAGACACGTCACCGACAACATCACCCC ATAAACAAGCAAGCAGAGAGAGGACCTTCTTCAACTGGGAATGTTCCGTC CAAGGAACGACGCCGCCATCCCCAAACTATTGTGCTCAAGAAAAGCTGCG ACTTTTGCTTCAAGCGGAGGAAGAGATGTGACGGACGTGCCCAGAGGCGA TGCAGGTGAGCTGAGAAGACCGTGCACCTCTTCTACATGAACGTATGTCG CAGTTCTTCATAATCGCTTGCGGCAAATCGGGTATAAAAATATACATGTA GATAAACGGGCCGAATGGGTGTAAAGTGGTGGATGAGGCTTTGGCGCATG CGTAAGTGTCGCGGCACGCTTGAATTCGTGGTTGCTGGTTGTCTCGAATC TGCGTTGTGCCGGTGACATCAAACGAGACGTCGACGCTCTTTTCCTCATT CGAGAAGGTCCTTTACAGGTGTACACGAGATGGTCGAAAGGGATGCATGG TTGCCGGTAATCTTCGGAAACTGGACACATNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG TACTTGCCGTACACACACCAGACTGTCTCGAACCTCCTAAATATCAATGC CTGTACAGCAGAAGTCTATTTACCATGTACTCCCAGCTACATCATCAAAA TCTTCTCGGACCTCGAGTTCCCTGAACCAGTCACCTCAAACGTTGACCTG GCACACTCTTTCGCGCCCTGTTTCAACGTCACACCTCGAGTTCCCTGAAC TTATCACCTCAAAAGTTGACCTGGCACACTCTTTCGCGTCCTGTTTCAAG GTCAACACCAAGGGATGGGGTTTCGACTTGGCAAGCAGCTAAACTCTAGC TCTTTGCCCACTATAAATAGTCTGTTTCATCGATCTTGTATTTCTAAATT TTTCATGTCTGTCCTGGAAGAAACACCGGGTTGTCGTTTATCATCGTCTG TCTCATCTATCTCCACTCGGAGCGGACACGTTCTGCTGACAGGCTCAACA GACTTCCGTGCCGACACGTGCGATGGCAACAAACTGCTGCCACCCCTGTA ACCCCTGTAGATGACATTTTCTCACGCCCTCCTTCCTGAACGTCCTTGTG TTTTTTTCCGGCCTTTCAAGAGGGAGCGTTCATGTCACATACGCGTAGAC CCTCCCTGATTTTCTATGCTAATCGTCACGGGCGCGCGCCCACGTGATTC CCGGCCTCACTTCGCAAGTGTCGGCGCCTCTTCCGCTCACTCGCGCTCTC GGCGGCAGTTTTTGCGTCGAAAAAGGGCGGCCGGAGTGTCACTACAGCAT GAGGTCCCTCCCGAGCATGTCTTCGAAGACCCCGACCGTTGTTCCAATCT CCGGTGAGGAGGACGCCGCTCGAGACGATTCGCCGCCCACAGGTCTAAGC CTCTGGGCCGCGGCGGAGGTAGATGACGAGGACAACGCCGATACCGGAGC ACAACACACGGCGAAGAAGGGGTCAGGGGCGGCTGTTGGGGTCACGGGCT TGGTGCTTCCATTCAAGAGGTACACACACGACATGGTGAAGATGAGATCC GTCCGGCGTGCATGTATGTTTTTGAAAGCAGGAGCGGCAACGATCCGGCC GGCACGCGTGTATATTCTTGAAAGCAAGAGCGGTAACCACAACGATTTCC CAAGCATTATCCGCACAATGTGTTTGCACGTACTACTTGTTATGTCCACC TCAAGATCACCGGACAGAAAAAAGAAGCCTCTGGACCACACGGGGTGCCA GCCTTTCCTTTTCCCCAACATTCCTCCCTCCCTCGCCCGGTGCCGCTCTT TTGTCTCGTGTCGTGTTCGAACACTCCTTCTTTCTCAGGGCCCGGCTCAG CGCCTCCCCGGCGACTGGGCTGGCAGGCCTGCTTGAGAACGAACTCTTGG GGGACTTTTTCGGTTGCTTGGGCTTCCTGTCTATTGCCACCGAGAGGTTT GCGCCGATTGTTTTGTAGACACAATTTTTCGTCATAAAGGAAGGATCGCG TCGGCCAAGTAGCTGCCGTCCTCGCTGAGGAAACTTCCACCGGTCTCACG ACCGGCCTCAGAAATCTCGCAGCCCGCATACGGGGACCATTGGCGACCGC GTTTTTCGAGTCGACGGTGACAATGTATTTGCGCGTTGCTTACTCCTAGT TTGCGAATCGATGAGGATTTTTTCGGGGTCATTTGTTCGAGTCGCCGGAG CATGGGCAAGTTGTGGACATTTTGCACGACAAGAAGTTTTGTGGTTTCAC AGCGACTCTTGGTAGCACCCCGCGGAAGCACTGTTCCACCTACGATGACG GCGGCGATTCCACCTGGCCATTACCCACCGTAACTTGTGTTTTGATCGTT GCCGCGAATGTCGCGTATCGCAATAGCCTCGTCCCCGGAGTCCGGGGTAA TATTTTTTTTCTCTTTTCCCCTACATGGTAGAGTTTGGTTTCTCCGCACT TAACCCTCCCAGCGTGCGGTTCCTCTCGACAGCATCGTCCGCGGTGCGAT GGTGAGTGTGATGCGGGCCAACAACGTGCTGAATCAACAAGGGGCAATAA CACCGGCTCGGCCTCCGCCTGCAGCCGCCGGGGGCTGGCTGGTTGAGGAG GACGATACCGAAGAGGCCCCCGTAAGCAGCGTCCCGACAGAGGAGACGTG CTGGCGCAATGCGGTGACGACCGAGGATGCAGCGTTGCCGCGAGATGCAT CGACGTGTATCCTGTGGTGCGCGATCGCTCTCGGTGCTCTCGTGCGAGGG TACCCTTTGCCACACGTGGGTGGGAACGAAGGCCGCTTTTTGGTGGCTAA AGCAGGGTGCAGCAGGCTGTCGAGCCAGTGCTGGACACCGTTCTCGATTG GCTATTTCGATAGGAATCCGTCTAGGTCACCTTTTGAGTCATGCTGTAGC AGAAGGAACAAGAGCGCTATACCTGTGCCGACATCCATTTTTCTTGTCCT GTGCTCCAATGAACTGTACGCATGACCCTCCTCAATCGCGGAACAACAGG TGCAGCGGTACGTCCATCTGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10543:1008..4479-

>mRNA_Ecto-sp13_S_contig10543.511.1 ID=mRNA_Ecto-sp13_S_contig10543.511.1|Name=mRNA_Ecto-sp13_S_contig10543.511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10543:1008..4479- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCGGGAGAAACCAAGCCTTGCACAAGGCACAAGGACAAGGCACCGT
CACCGATAACACCCCCATGAACAAGCCAGAGACACGTCACCGACAACATC
ACCCCATAAACAAGCAAGCAGAGAGAGGACCTTCTTCAACTGGGAATGTT
CCGTCCAAGGAACGACGCCGCCATCCCCAAACTATTGTGCTCAAGAAAAG
CTGCGACTTTTGCTTCAAGCGGAGGAAGAGATGTGACGGACGTGCCCAGA
GGCGATGCAGTTTTTGCGTCGAAAAAGGGCGGCCGGAGTGTCACTACAGC
ATGAGGTCCCTCCCGAGCATGTCTTCGAAGACCCCGACCGTTGTTCCAAT
CTCCGGTGAGGAGGACGCCGCTCGAGACGATTCGCCGCCCACAGGTCTAA
GCCTCTGGGCCGCGGCGGAGGTAGATGACGAGGACAACGCCGATACCGGA
GCACAACACACGGCGAAGAAGGGGTCAGGGGCGGCTGTTGGGGTCACGGG
CTTGGTGCTTCCATTCAAGAGGGCCCGGCTCAGCGCCTCCCCGGCGACTG
GGCTGGCAGGCCTGCTTGAGAACGAACTCTTGGGGGACTTTTTCGGTTGC
TTGGGCTTCCTGTCTATTGCCACCGAGAGCATCGTCCGCGGTGCGATGGT
GAGTGTGATGCGGGCCAACAACGTGCTGAATCAACAAGGGGCAATAACAC
CGGCTCGGCCTCCGCCTGCAGCCGCCGGGGGCTGGCTGGTTGAGGAGGAC
GATACCGAAGAGGCCCCCGTAAGCAGCGTCCCGACAGAGGAGACGTGCTG
GCGCAATGCGGTGACGACCGAGGATGCAGCGTTGCCGCGAGATGCATCGA
CGTGTATCCTGTGGTGCGCGATCGCTCTCGGTGCTCTCGTGCGAGGGTAC
CCTTTGCCACACGTGGGTGGGAACGAAGGCCGCTTTTTGGTGGCTAAAGC
AGGGTGCAGCAGGCTGTCGAGCCAGTGCTGGACACCGTTCTCGATTGGCT
ATTTCGATAGGAATCCGTCTAGGTCACCTTTTGAGTCATGCTGTAGCAGA
AGGAACAAGAGCGCTATACCTGTGCCGACATCCATTTTTCTTGTCCTGTG
CTCCAATGAACTGTACGCATGA
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