mRNA_Ecto-sp13_S_contig1054.508.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: D7FUI1_ECTSI (Ankyrin repeat protein E2_17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI1_ECTSI) HSP 1 Score: 215 bits (548), Expect = 1.850e-68 Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 1
Query: 94 DDFGLTALHYASWNGHVRCVEMLCINDLGHDGVGLQRSCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRDDCARALNLEIGNAK 420
DDFGL+ALHYASWNGHVRCVE+LCINDLGHDG GLQRSCIDL+SIKGWTPLHLAASDGVNG+KCIDALLRAGADRSIRDVDGKT LE AIDAGRDDCARALNLEIGNAK
Sbjct: 2 DDFGLSALHYASWNGHVRCVEILCINDLGHDGAGLQRSCIDLRSIKGWTPLHLAASDGVNGMKCIDALLRAGADRSIRDVDGKTALEAAIDAGRDDCARALNLEIGNAK 110
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: A0A7S4VTH5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTH5_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.280e-25 Identity = 68/193 (35.23%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 1 MSGELLRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLG-HDGVGLQRSCIDLQSIKGWTPLHLAA----------------------SDGVNGVKCIDALLRAGADR-SIRDVDGKTTLELAIDAGRDDCARALN-LEIGNAKNIADYRKKMEANLKVQRAQRMLNTPGEP 504
MSG+ LR A+ G ++KNLLA G+NPCS D+ GLTALHYA WNGH++CVE+L N G H G S I+LQS G+T LH+ A + ++C LL GAD ++RD++GK+ ++LA +AG + N ++ + + + ++ + + A +Q +++ T G+P
Sbjct: 1 MSGDQLRNFAVVGYFLELKNLLAGGANPCSVDEKGLTALHYAVWNGHLQCVEILVANHWGKHHETGDVCSSINLQSKTGYTALHIVAMRMAALLEDESYDANENSDERQTKESENIECCRLLLMVGADCIALRDIEGKSAIDLAREAGNESLVSVFNSVKRPSEQQVQEFTESILAKHMMQHRRKVATTIGDP 193
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: A0A835Z6I7_9STRA (Ankyrin repeat protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.420e-23 Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 97 DFGLTALHYASWNGHVRCVEMLCINDLGHDGVGLQRSCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRDDCARALN 399
D GLTALHYA +NG+ CVE+LC N GHD G SCID+ S G T LHLAA++ N I+ LL +GAD +IRD G+T ++A + GR A L+
Sbjct: 3 DHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVLS 103
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: F0YDZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDZ5_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 3.480e-16 Identity = 65/228 (28.51%), Postives = 87/228 (38.16%), Query Frame = 1
Query: 1 MSGELLRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLG----------------------------------------HDG-----------------------VGLQR---------------------------------SCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRDDCARAL 396
MSG +LR A GD ++ L+ G NPCS+D+ GL LH+A+WNGHV CVE+L +NDLG DG +G R SCI+L + GWT LH+AA NGV+ LL AG D ++RD +G T ++AI++ CA L
Sbjct: 1 MSGTVLRETAAQGDATYLRELILGGGNPCSSDENGLCPLHFATWNGHVECVELLVVNDLGVASAPSEEDLKKLRAKEDYEARMGTGSALAGGAGRITKVSEDGRERAKAARKLDEARLAAEQGSTVIGGSRYTGKSRNWREEEXXXXXXXXXXXXXXXXXKPMVSCINLTTKAGWTALHIAAMGAFNGVETATILLLAGCDPTLRDENGHTAYDVAINSRNVACAALL 228
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: A0A7S3ZR81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR81_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.190e-14 Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 MSGELLRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLG 180
MSG +LR A GDV+ +K LL G NPCSTDD GL ALH+A WNGHV VE+L +ND+G
Sbjct: 1 MSGSVLREAAAQGDVEYLKELLETGGNPCSTDDNGLNALHFAVWNGHVEAVELLVVNDVG 60
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: A0A482S1M6_9ARCH (Ankyrin repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1M6_9ARCH) HSP 1 Score: 76.3 bits (186), Expect = 2.090e-14 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 1 MSGELLRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLGHDGVGLQRSCIDLQSIKGWTPLH 249
MS +R+ I +++++ L+ +N CS D++GLTALHYA WNGHV CV++L N G D G + +C++++S G T H
Sbjct: 1 MSEAKVRQACIHNRIEELEVLVKARANVCSIDEWGLTALHYAVWNGHVECVKLLVFNSHGVDSKGQKTTCLNMKSCIGLTGTH 83
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: UPI0008F9DA70 (ankyrin repeat domain-containing protein 39 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9DA70) HSP 1 Score: 65.1 bits (157), Expect = 2.030e-9 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 28 AIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLGHDGVGLQRSCIDLQSIKGW-TPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRD 378
A+ GD+++++ LL +G + D G TALHYA+ GH+ E+L D G + ID Q+ G TPLH A S G V + LL+ GA+ I+D DG T E A++ G +
Sbjct: 61 ALDGDINRVRKLLQKGISIDGLDSGGYTALHYAARAGHLSVCELLI--DAG--------AAIDSQTRAGRATPLHRAVSAGKEDVVML--LLKHGANPGIKDADGNTCFERAVNCGNE 166
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: H3AFP1_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AFP1_LATCH) HSP 1 Score: 57.4 bits (137), Expect = 5.230e-6 Identity = 45/152 (29.61%), Postives = 68/152 (44.74%), Query Frame = 1
Query: 28 AIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLC---------INDLGHDGVGL-------------------QRSCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRDDCARALN 399
A GDV + + + + D G TA+H A+ +G + CV++L N G + L Q + I++Q+ TPLH AAS+G+ C+ AL+ AGAD SI+D G T ++L G C R L+
Sbjct: 5 ATIGDVTWLHQSMKKAKSTTQRDRNGFTAIHLAAKHGRLECVKILVEEYNVSVDLTNSQGCRPLHLVFSKEHKLRSFQCMTYLLMQGAKINVQNSDRQTPLHKAASEGLQD--CVAALVEAGADVSIKDTSGHTPIDLTKIWGHRKCCRYLS 154
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: UPI0009E282E5 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E282E5) HSP 1 Score: 57.8 bits (138), Expect = 5.930e-6 Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 1
Query: 16 LRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLCINDLGHDGVGLQRSCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTL 351
L A G + ++ LL + D FG LH A+ NGHV CVE LC+++ GH ++ + +G TPLHLAA G + CI LL GA+ IRD + T L
Sbjct: 1081 LHYAASLGSLKILQLLLEKMCIVAPKDVFGRCPLHAAAENGHVTCVEQLCVSEPGH---------VNDRDERGLTPLHLAAR-GSHRKTCI-LLLSMGANPIIRDSNRWTAL 1181
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Match: UPI0006D938A5 (ankyrin repeat domain-containing protein 53 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D938A5) HSP 1 Score: 57.4 bits (137), Expect = 6.110e-6 Identity = 45/152 (29.61%), Postives = 68/152 (44.74%), Query Frame = 1
Query: 28 AIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCVEMLC---------INDLGHDGVGL-------------------QRSCIDLQSIKGWTPLHLAASDGVNGVKCIDALLRAGADRSIRDVDGKTTLELAIDAGRDDCARALN 399
A GDV + + + + D G TA+H A+ +G + CV++L N G + L Q + I++Q+ TPLH AAS+G+ C+ AL+ AGAD SI+D G T ++L G C R L+
Sbjct: 50 ATIGDVTWLHQSMKKAKSTTQRDRNGFTAIHLAAKHGRLECVKILVEEYNVSVDLTNSQGCRPLHLVFSKEHKLRSFQCMTYLLMQGAKINVQNSDRQTPLHKAASEGLQD--CVAALVEAGADVSIKDTSGHTPIDLTKIWGHRKCCRYLS 199 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1054.508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1054.508.1 >prot_Ecto-sp13_S_contig1054.508.1 ID=prot_Ecto-sp13_S_contig1054.508.1|Name=mRNA_Ecto-sp13_S_contig1054.508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp MSGELLRRCAIFGDVDKIKNLLAQGSNPCSTDDFGLTALHYASWNGHVRCback to top mRNA from alignment at Ecto-sp13_S_contig1054:13914..19340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1054.508.1 ID=mRNA_Ecto-sp13_S_contig1054.508.1|Name=mRNA_Ecto-sp13_S_contig1054.508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5427bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1054:13914..19340- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1054:13914..19340- >mRNA_Ecto-sp13_S_contig1054.508.1 ID=mRNA_Ecto-sp13_S_contig1054.508.1|Name=mRNA_Ecto-sp13_S_contig1054.508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1054:13914..19340- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |