mRNA_Ecto-sp13_S_contig10534.504.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5L6J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE) HSP 1 Score: 242 bits (617), Expect = 3.480e-72 Identity = 152/174 (87.36%), Postives = 159/174 (91.38%), Query Frame = 1
Query: 232 NDGYLSINALVDGGAAIEARDNKGRTPLHLASSSHRCAEMKAXXXXXXXXXXXXXXXXXXXXXAVDEGCDAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNA 753
+DGYL INALVDGGAAIE RDNKGRTPLHLASSSHR EMK XXXXXXXXXXXXXXXXXXAVDEG DAA+A SPVDLLLRWGADE+A+DDGDQXXXXXXXXXGP+VGNSP E WEYRVEVT TTYA+ APVQKLLDDA+KDRTWRRRGWLVMCRAFPDKVRLRADSGGS A
Sbjct: 480 HDGYLLINALVDGGAAIEDRDNKGRTPLHLASSSHRFVEMKVLLRXXXXXXXXXXXXXXXXXXAVDEGYDAADACSPVDLLLRWGADESAKDDGDQXXXXXXXXXGPNVGNSPAEPWEYRVEVTHTTYADVAPVQKLLDDAQKDRTWRRRGWLVMCRAFPDKVRLRADSGGSIA 653
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: D7FJ34_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ34_ECTSI) HSP 1 Score: 206 bits (524), Expect = 2.590e-57 Identity = 141/183 (77.05%), Postives = 150/183 (81.97%), Query Frame = 1
Query: 235 DGYLSINALVDGGAAIEARDNKGRTPLHLASSSHRCAEMKAXXXXXXXXXXXXXXXXXXXXXAVDEGCDAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVRG 783
DGYLSINALVDG LAS+SH C MKAXXXXXXXXXXXXXXXXXXXXXAVDEG A + RSPVDLLLRWGADETA+DD XXXXXXXXXGP+VGNSP ELWEYRV+VT +TY AAPVQKLLDDA+KDRTWRRRGWLVMCRAFPD+VRLRAD+ SNAK GRDVRVRG
Sbjct: 708 DGYLSINALVDGXXXXXXXXXXXXXXXXLASASHSCTGMKAXXXXXXXXXXXXXXXXXXXXXAVDEGYYATDVRSPVDLLLRWGADETAKDDXXXXXXXXXXXXGPNVGNSPAELWEYRVKVTCSTYGVAAPVQKLLDDAQKDRTWRRRGWLVMCRAFPDRVRLRADTERSNAKTGRDVRVRG 890
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5JW93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW93_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.230e-45 Identity = 126/262 (48.09%), Postives = 149/262 (56.87%), Query Frame = 1
Query: 4 NGGLLHQAAEGGSVSCVEALLAGGADIALRDEAGRTALHVAALHSDQVXXXXXXXXXXXXXXXXXXXXXXXXXXXANDGYLSINALVDGGAAIEARDN--KGRTPLHLASSSHRCAEMKAXXXXXXXXXXXXXXXXXXXXXAVDEGCDAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVRG 783
N GL+H+AA+G S SCVE LAG ADI LRD+ TALH AA HS + + L++ GA ++RD+ GR PL +A+ XXXXXXXXXXXXXXX VD D A+ R+ VDLLLRWGADE A+DDGD SP ELWEYRV VTDTT+A P+ KLL D +KDRTWRRRGWLV+C AF KVRL+AD+GG+NA GR VRV G
Sbjct: 526 NRGLIHEAAQGSSASCVELNLAGSADINLRDDEESTALHAAAGHSTSI----------------------------------VEKLLEHGADPDSRDSDGNGRNPLLVAAYXXXXXXXXXXXXXXXXXXXXXXXXRSPLHLGVDGWIDLADVRALVDLLLRWGADEIAKDDGDDSQD----------SRSPGELWEYRVGVTDTTHAEVPPIGKLLKDTQKDRTWRRRGWLVLCHAFTYKVRLKADNGGANAGTGRSVRVGG 743
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.080e-23 Identity = 64/185 (34.59%), Postives = 93/185 (50.27%), Query Frame = 1
Query: 232 NDGYLSINALVDGGAAIEARDNKGRTPLHLASSSHRCAEMKAXXXXXXXXXXXXXXXXXXXXXAVDEGCDAANAR--SPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVR 780
N+ + I AL G + +DN GRTP LA+ H + M+ + + CD+ ++ + +DLLLRWGADE A D S+GN+P+ +W ++AN V+K+ A +D+ WR+RGWLV+CRAFP+ VRL+ADS G+ GR VR R
Sbjct: 635 NNNGVCIEALTSAGTSTSIKDNDGRTPFQLATICHSRSVMRMLLR------------------SAHDRCDSRDSAMATTIDLLLRWGADENAVD---------------SLGNTPLTVWRENESTYTLSWANKQSVKKIFKRAPRDKRWRQRGWLVLCRAFPNSVRLKADSDGTCPAAGRSVRAR 786
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 3.710e-17 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 439 DAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVR 780
D+A A + +DLLLRWGADE A D S G +PV +W + ++AN V+K+ A +D+ WRRRGWLV+CRAFP++VRL+ D+ G+ + GR +R R
Sbjct: 747 DSAMATT-MDLLLRWGADENAVD---------------SAGRTPVTVWRENESMYTLSWANKQSVKKMFQRAPRDKAWRRRGWLVLCRAFPNRVRLKEDNAGTCPRAGRSLRAR 844
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5L7B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B7_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 7.960e-15 Identity = 91/214 (42.52%), Postives = 107/214 (50.00%), Query Frame = 1
Query: 34 GGSVSCVEALLAGGADIALRDEAGRTALHVAALHSDQVXXXXXXXXXXXXXXXXXXXXXXXXXXXANDGYLSINALVDGGAAIEARDNKGRTPLHLASSSHRCAEMKAXXXXXXXXXXXXXXXXXXXXXAVDEGCDAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWR 675
G S VE LL GA++ RD RT LH A+ N Y SI+ALVDGGAAIE DN GRT LHLASS HRCA MKAXXXXXXXXXXXXXXXXXXXXX V ET++D P VG +PV++W E+ ++AAP+++LL A+KDRTWR
Sbjct: 551 GDSAEVVEILLQHGAEVESRDMDDRTPLHKVAM-------------------------------TYNKRYTSIDALVDGGAAIETPDNFGRTILHLASSKHRCAAMKAXXXXXXXXXXXXXXXXXXXXXXVSY--------------------ETSKD----TVEYEDVEDEPYVGRTPVDVWRALAEMNYAWASSAAPIRRLLVGAQKDRTWR 709
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5K8F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.680e-14 Identity = 55/117 (47.01%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 10 GLLHQAAEGGSVSCVEALLAGGADIALRDEAGRTALHVAALHSDQVXXXXXXXXXXXXXXXXXXXXXXXXXXXA-NDGYLSINALVDGGAAIEARDNKGRTPLHLASSSHRCAEMKA 357
G LH AAEGG+VS VE LA G DI R AG TAL VAA S +V + S++ALVDGGAAI+A DN G T LH+AS HRCAEMKA
Sbjct: 594 GGLHAAAEGGNVSRVELFLADGVDINFRVNAGSTALRVAARRSSEVVEKLLQHGADTDARNVSDRTPLHEATLTYKKEHNSVDALVDGGAAIDAWDNMGNTSLHIASLKHRCAEMKA 710
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 7.720e-13 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 463 VDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVR 780
+DLLLRWGADE A + S G +PV +W V A+ V K+ +D+ WRRRGWLV+CRA P++VRL+AD G+ + G+ +R R
Sbjct: 705 IDLLLRWGADENAVN---------------SAGRTPVTVWRRNGYVHRLPAASRTSVPKMFHWIPRDKAWRRRGWLVLCRALPNRVRLKADDAGTCSGAGQSLRAR 795
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: D7FHH2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH2_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 4.560e-9 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 553 SVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAKPGRDVRVR 780
S G +P +W + + ++ V+K+ + A D+ WRRRGWLV+CRAFP +VRL+AD+ G+ GR VR R
Sbjct: 775 STGITPAIVWRDNESMDNLSWEKWQSVRKMFEWAPSDKAWRRRGWLVLCRAFPHRVRLKADNVGACPGAGRSVRAR 850
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Match: A0A6H5KNA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA2_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.710e-8 Identity = 44/112 (39.29%), Postives = 54/112 (48.21%), Query Frame = 1
Query: 421 AVDEGCDAANARSPVDLLLRWGADETARDDGDQXXXXXXXXXGPSVGNSPVELWEYRVEVTDTTYANAAPVQKLLDDARKDRTWRRRGWLVMCRAFPDKVRLRADSGGSNAK 756
A+ C N + DLLL WGADETA D D P + P E + + KLL+ A KDRTWRRRG LVMCRA PD++ L AD + A+
Sbjct: 22 ALHTACHVVNPDA-ADLLLTWGADETAADWNDAAVSAVI----PRIDEPPEENRPAILRLA-----------KLLEFADKDRTWRRRGLLVMCRAHPDRLLLAADVSNNTAE 117 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10534.504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10534.504.1 >prot_Ecto-sp13_S_contig10534.504.1 ID=prot_Ecto-sp13_S_contig10534.504.1|Name=mRNA_Ecto-sp13_S_contig10534.504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp RNGGLLHQAAEGGSVSCVEALLAGGADIALRDEAGRTALHVAALHSDQVVback to top mRNA from alignment at Ecto-sp13_S_contig10534:293..1075+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10534.504.1 ID=mRNA_Ecto-sp13_S_contig10534.504.1|Name=mRNA_Ecto-sp13_S_contig10534.504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10534:293..1075+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10534:293..1075+ >mRNA_Ecto-sp13_S_contig10534.504.1 ID=mRNA_Ecto-sp13_S_contig10534.504.1|Name=mRNA_Ecto-sp13_S_contig10534.504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10534:293..1075+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |