mRNA_Ecto-sp13_S_contig10526.499.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A6H5KZG7_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG7_9PHAE) HSP 1 Score: 359 bits (921), Expect = 1.270e-121 Identity = 207/235 (88.09%), Postives = 209/235 (88.94%), Query Frame = 1
Query: 1 ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLSPANNAAAASVAQSPARTVGSDGGGAAFASPGSQTSPSGVAARGAYXXXXXXXXXX---------------GGVSRAGGVGGAALDEN 660
ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH+GVQTPSSLGKVSDKFLVQTVGLG+GEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLS ANN AAASVAQSPARTVGSD GGA FASPGSQTSPSGVAARGAY XXXX GGVSRAGGVGGA LDEN
Sbjct: 15 ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHEGVQTPSSLGKVSDKFLVQTVGLGDGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLSAANNTAAASVAQSPARTVGSDSGGATFASPGSQTSPSGVAARGAYGSRNGGXXXXXXXXXXXGGGGGGSRGGVSRAGGVGGAGLDEN 249
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: D7G412_ECTSI (MSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G412_ECTSI) HSP 1 Score: 344 bits (882), Expect = 5.870e-118 Identity = 186/193 (96.37%), Postives = 189/193 (97.93%), Query Frame = 1
Query: 1 ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLSPANNAAAASVAQSPARTVGSDGGGAAFASPGSQTSPSGVAARGAY 579
ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH+GVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR+SLASGAAKSLS AN+ AAASVAQSPARTVGSD GGA FASPGSQTSPSGVAARGAY
Sbjct: 15 ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHEGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRISLASGAAKSLSAANSTAAASVAQSPARTVGSDSGGAVFASPGSQTSPSGVAARGAY 207
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A835YYD8_9STRA (PapD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD8_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.410e-22 Identity = 54/137 (39.42%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 ITPDTLSFELFPNSQPGCVLYVS-NAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
I+P+ + F L +P C + VS AAG FKVKTTEP RYLV+PNQG++ G ++ +Y++E+E + L+ V +LG DKFLVQ + A +T++ A+ TE +T++WA NK +++NK++ V+
Sbjct: 6 ISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLD--VAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQ 140
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A3R7AB90_9STRA (MSP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AB90_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.120e-22 Identity = 62/134 (46.27%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
D+LSF L P+S P L +SN + V +AFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ P+ +DKFLVQ+VG+ LLT A + + LT +W KT I NKKL R
Sbjct: 16 DSLSFALSPSSSPQAALTISNPSNVENIAFKVKTTRPMRYLVRPNQGVIGPNSSATVLVILQQKDCDELLR---LDPTERQLSNDKFLVQSVGVEAEFCDLLTKKQAKEVMDDLTSLWNHAEKTQISNKKLRCR 146
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A024U2B6_9STRA (MSP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2B6_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.280e-21 Identity = 62/134 (46.27%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
D+LSF L P+S P L +SN + V +AFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ P+ +DKFLVQ+VG+ LLT A + + LT +W KT I NKKL R
Sbjct: 16 DSLSFALSPSSSPQAALTISNPSNVENIAFKVKTTRPMRYLVRPNQGVIGPNSSATVLVILQQKDCDELLR---LDPTERQLSNDKFLVQSVGVEAEFCDLLTKKQAKEVMDDLTSLWNHAEKTQISNKKLRCR 146
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A6G0XHR7_9STRA (MSP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHR7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 9.550e-21 Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH-DGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASG 426
D+L+F L NS P L +SN + V VAFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ D + S +DKFLVQ+VG+ LLT+ A + + LT +W +K+ I NKKL R + +G
Sbjct: 16 DSLTFTLAANSSPQAALTISNPSSVENVAFKVKTTRPMRYLVRPNQGVIGPNSSATVLVILQQKDCDELLRLDASERQLS----NDKFLVQSVGVEAAFCDLLTTKQAKEVMDELTSLWNGSDKSQISNKKLRCRFTEGNG 152
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A3L6UU33_9STRA (MSP domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UU33_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.690e-21 Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH-DGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
D+LSF L NS P L +SN + V VAFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ D + S +DKFLVQ+VG+ LLT ++ + + LT +W K I NKKL R
Sbjct: 16 DSLSFSLSTNSTPQAALTISNPSSVENVAFKVKTTRPMRYLVRPNQGVIGPNSSATVLVILQQKDCDELLRLDQAERQLS----NDKFLVQSVGVEAEFCDLLTKKSSKEVNDDLTSLWNQAEKAQISNKKLRCR 146
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: G4YN91_PHYSP (MSP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YN91_PHYSP) HSP 1 Score: 96.7 bits (239), Expect = 1.050e-20 Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGVT-VAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHDGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLSPANNAAAASVAQSPARTV 498
D+LSF L P + P VL + N A +AFKVKTT P RYLVRPNQG++GP ++ V L +K+C+ L+ P+ +DKFLVQ++ + + L+ + + + + LT +WA +K A+ NKKL R + G + SP + A+S SPA+T
Sbjct: 22 DSLSFHLQPQTAPQAVLTIRNVADDRQIAFKVKTTRPLRYLVRPNQGLLGPNGSASIMVILQQKDCDELLR---LDPAERQLANDKFLVQSIYVDDSFYELVKTKSTKEMADELTNMWARTDKRALSNKKLRCRF-VQDGEERPASPPSPQRASSTNVSPAKTA 181
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: A0A1V9Z0W5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0W5_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.590e-20 Identity = 63/135 (46.67%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH-DGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
D+L+F L S P L +SN + V VAFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ D + S +DKFLVQ++G+ LLT A + + LT +WAT K AI NKKL R
Sbjct: 676 DSLAFALAAGSSPQAALVISNPSSVENVAFKVKTTRPMRYLVRPNQGVIGPNSAATVLVILQQKDCDELLRLDASERQLS----NDKFLVQSIGVDAEFCDLLTQKTAKEVMDDLTTLWATAEKKAISNKKLRCR 806
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Match: W4G4I1_9STRA (MSP domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4I1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.550e-20 Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 10 DTLSFELFPNSQPGCVLYVSNAAGV-TVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIH-DGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVR 408
D+LSF L NS P L +SN + V VAFKVKTT P RYLVRPNQG+IGP V V L +K+C+ L+ D + S +DKFLVQ+VG+ LLT ++ + + LT +W K I NKKL R
Sbjct: 16 DSLSFSLSTNSTPQAALTISNPSSVENVAFKVKTTRPMRYLVRPNQGVIGPNSSATVLVILQQKDCDELLRLDQAERQLS----NDKFLVQSVGVEAEFCDLLTKKSSKEVNDDLTSLWNQAEKAQISNKKLRCR 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10526.499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10526.499.1 >prot_Ecto-sp13_S_contig10526.499.1 ID=prot_Ecto-sp13_S_contig10526.499.1|Name=mRNA_Ecto-sp13_S_contig10526.499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp ITPDTLSFELFPNSQPGCVLYVSNAAGVTVAFKVKTTEPRRYLVRPNQGMback to top mRNA from alignment at Ecto-sp13_S_contig10526:1948..4701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10526.499.1 ID=mRNA_Ecto-sp13_S_contig10526.499.1|Name=mRNA_Ecto-sp13_S_contig10526.499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2754bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10526:1948..4701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10526:1948..4701- >mRNA_Ecto-sp13_S_contig10526.499.1 ID=mRNA_Ecto-sp13_S_contig10526.499.1|Name=mRNA_Ecto-sp13_S_contig10526.499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10526:1948..4701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |