mRNA_Ecto-sp13_S_contig1052.495.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI) HSP 1 Score: 260 bits (665), Expect = 3.450e-85 Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 1
Query: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGIFNRMVEDGFYDR 381
MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARI+LVVEKDG+FNRMVEDGFYDR
Sbjct: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDR 127
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE) HSP 1 Score: 254 bits (648), Expect = 1.330e-83 Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 1
Query: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRIS+RGEGF+DWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDG+FNRMVEDGF D
Sbjct: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISVRGEGFQDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGVFNRMVEDGFCD 126
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.880e-33 Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 19 LLETRKTATQREIYYTFVKHFAN-QTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEG-----------FEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGIFNRMVEDGFYDR 381
LL KTATQRE+YY FA Q +CN AIL +LL EPRHCLG+VASSRG+ GR+ R DW DPR+ GG+ G ++ SDW++ LE +SDA+ +LVVEKDG F R+ ED FYDR
Sbjct: 9 LLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDR 140
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A196SEI9_BLAHN (Meiotic recombination protein SPO11 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SEI9_BLAHN) HSP 1 Score: 106 bits (264), Expect = 7.960e-25 Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 19 LLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
L++ RKT QRE+YY FA Q +C+D I DC +LL PR LGI A+ +GY++GR+ E+W D S S L+I + + ++LKSDA++ILVVEKDGIF R+VED F+D
Sbjct: 96 LMKERKTVNQRELYYLNTDMFATQRECDDCIRDCIALLHVPRDVLGITATPKGYVSGRLLYSLGDAENWTDLSSV---SPLSIAYS-MVQHMQLKSDAKLILVVEKDGIFKRLVEDRFFD 211
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: K0RG96_THAOC (TP6A_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG96_THAOC) HSP 1 Score: 92.8 bits (229), Expect = 2.100e-19 Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIR-------GEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKS-----------DARIILVVEKDGIFNRMVEDGFYDR 381
MSF +LL + +T T RE+YY FV HF +Q +C+ AILD +LG R LG+ AS +G+ G + I G+ D + GL IT +W R E ++ DAR+I+V+EK+G++NR+ E+ +DR
Sbjct: 371 MSFVHQLLLSNRTTTTREVYYVFVTHFRSQRECDGAILDVAKMLGVSRVSLGLSASPKGWFCGSLEITRRGTLPCGKDVSGKIDGTALPSVQGLPITKEWTERDDEGRTEDGVEILLSSKDARLIVVIEKEGVYNRLSEERIFDR 515
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A485L555_9STRA (Aste57867_16293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L555_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.560e-19 Identity = 56/121 (46.28%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 19 LLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLT-RPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
LL+ KT TQRE+YY F Q ++ ILD LG PR CL IV +G GRISI G W D G +G IT + L +P ++ SDA ILV+EKDGIFNR+ ED F+D
Sbjct: 49 LLKEDKTITQRELYYLHT-FFETQKDADECILDVGGFLGVPRECLNIVGGVKGCFTGRISIAENGL--WIDCAKDG-PTGRPITRETLRLQPEQITSDANFILVIEKDGIFNRLSEDCFFD 165
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: B7G1L8_PHATC (Type II DNA topoisomerase VI subunit n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1L8_PHATC) HSP 1 Score: 90.9 bits (224), Expect = 6.800e-19 Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWL--TRPLELKS-DARIILVVEKDGIFNRMVEDGFYDR 381
+ F LL R+T T RE+YY V H+ +Q +C+ AI D LL PR LG+ AS +G+ G + + G + D R G I+ +WL TR + S A ILV+EK+G++NR+VED F+DR
Sbjct: 120 LDFCHSLLRARRTTTTREVYYYHVTHYRSQKECDSAIQDTAILLQVPRSSLGLKASPKGWFCGDVQLVSNG-QVVLDGRHLQSIHGAPISGEWLAPTRDFTIHSCAATCILVIEKEGVYNRLVEDRFFDR 248
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: UPI0007114B24 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114B24) HSP 1 Score: 86.7 bits (213), Expect = 1.460e-18 Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
M L RK+ QRE+YY + +C++ I +C +LL PR LGI A+S+GY+ GR+ I + +W D L+IT + +T+ L ++SDA+ ILV+EK+GIF R+ ED F+D
Sbjct: 1 MQICYNLCRERKSINQRELYYMNTDVW----ECDECIQECIALLRVPRDALGITATSKGYITGRLLISLKDSGNWSDLSV---EKPLSITYEMITK-LSVRSDAQFILVIEKEGIFKRLYEDKFFD 118
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A0P1AB95_PLAHL (Type ii dna topoisomerase vi subunit a 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB95_PLAHL) HSP 1 Score: 89.0 bits (219), Expect = 1.960e-18 Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 1
Query: 19 LLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLT-RPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
LL KTATQR++YY F Q++ ++AILD S+LG R + I+A+++G G ISI +G +W R G +IT + L + EL+S+A+IILV+EKDGIFNR+ ED F+D
Sbjct: 84 LLAENKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVSRGSMNIIAATKGCFTGDISILRDG--EW---RYFGNGEETSITHELLQLKQSELRSNAKIILVIEKDGIFNRLREDKFFD 198
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Match: A0A6A3F4G6_9STRA (TP6A_N domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F4G6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.020e-18 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 1
Query: 19 LLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLT-RPLELKSDARIILVVEKDGIFNRMVEDGFYD 378
LL KTATQR++YY F Q++ ++AILD S+LG PR + IV +++G G ISI +G W R G ++IT + L +P +++S+A+ I+VVEKDGIFNR+ ED FY+
Sbjct: 96 LLTESKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVPRGFMNIVGATKGCFTGDISILRDG--SW---RHFGSGEEVSITQELLQLKPSDVQSNAKYIVVVEKDGIFNRLREDKFYE 210 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1052.495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1052.495.1 >prot_Ecto-sp13_S_contig1052.495.1 ID=prot_Ecto-sp13_S_contig1052.495.1|Name=mRNA_Ecto-sp13_S_contig1052.495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCback to top mRNA from alignment at Ecto-sp13_S_contig1052:11319..13507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1052.495.1 ID=mRNA_Ecto-sp13_S_contig1052.495.1|Name=mRNA_Ecto-sp13_S_contig1052.495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1052:11319..13507- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1052:11319..13507- >mRNA_Ecto-sp13_S_contig1052.495.1 ID=mRNA_Ecto-sp13_S_contig1052.495.1|Name=mRNA_Ecto-sp13_S_contig1052.495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1052:11319..13507- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |