mRNA_Ecto-sp13_S_contig10501.482.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: D7G4C9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C9_ECTSI) HSP 1 Score: 326 bits (835), Expect = 2.560e-111 Identity = 174/197 (88.32%), Postives = 175/197 (88.83%), Query Frame = 1
Query: 1 QVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVNAGQFDDADGPPEXXXXXXXXXXXXXXXXXAPSS 591
+VLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEE LGG GGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVN GQFDDAD PPE APSS
Sbjct: 31 EVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEGLGGGAGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVN-GQFDDADVPPEDGEGDLANGHGAGANGHAPSS 226
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A1V9YCT0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YCT0_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.200e-24 Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 55 EGLGSLTVTTTRVVWLSSEDQSK--AFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEG----------AGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVNAGQFDDAD 516
+G G+L VTT RVVW+S + + + +D+ ++ LHAIS+D +FP PC+YC L +E++ ++E F P D TLQA+F+AFS +A LNP+ D+G A ++EE G + + A AEQ + AHLDS+L V + AGQFDDAD
Sbjct: 48 KGAGNLVVTTKRVVWISMQSHAPEVGYAWDMRFLSLHAISRDVSSFPEPCLYCHLDIEDD--VQEVRFVPEDN-TKTLQAMFDAFSASAALNPDDEDDGPRPHGRSRTQACMIDDEE----GEWIYNEDEVAAGAEQMDIAAHLDSILKVSPAITGSVAGQFDDAD 206
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A812X7B4_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X7B4_SYMMI) HSP 1 Score: 102 bits (253), Expect = 1.520e-24 Identity = 56/115 (48.70%), Postives = 76/115 (66.09%), Query Frame = 1
Query: 4 VLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEE----EDVLKEAFFAP-SDGEAATLQALFEAFSKAAELNPEP 333
++ E V F+PE+P G+L +T+ RV+W S E A+DFDV YI LHA++ DP +FP PC+YCQL VEE ED E +F P S+G+ LQ +F+AFS+AA LNP+P
Sbjct: 4 LMYTKEGVDFTFNPETPTIPGTLYITSRRVIWASEE---LAYDFDVPYIVLHAVTHDPSSFPRPCLYCQLDVEEGEGAEDEPTEMYFVPASEGD---LQEMFDAFSQAAVLNPDP 112
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A7S3HJ42_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ42_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.730e-24 Identity = 70/163 (42.94%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 22 EVTLAFSPESPE-GLGSLTVTTTRVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEE----------DVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSA-LSAEQERVLAHLDSVLVVPE 474
+V L+F P G G VT+ RV+WL + A+DFDV YI LHAI++DP ++P PCIYCQL EE +VL E F APS E LQA+F A S AA NP+P ++ G++E L+++ L AEQ R L HLDSV +PE
Sbjct: 38 DVELSFGGAKPVIGSGKFIVTSKRVLWLGVGES--AYDFDVPYIALHAITRDPDSYPKPCIYCQLDCEEXXXXXSDEEETEVLDEMFLAPSSEE--HLQAMFNALSAAALNNPDPLEDWEQEGDDE--------LIYNTDEVELGAEQARTLDHLDSVFNIPE 188
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A067D7X7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7X7_SAPPC) HSP 1 Score: 103 bits (257), Expect = 3.350e-24 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query: 55 EGLGSLTVTTTRVVWLSSED--QSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVN---AGQFDDAD 516
+G G+L VTT RVVW++S+ + +D+ Y+ LHAIS+D +FP PC+YC L VE++ ++E F P D + TLQA+F+AFS +A LNP+ + ++EE G +++ + Q + AHLDS+L V + + AGQFDDAD
Sbjct: 48 KGAGNLVVTTKRVVWITSQPGMAEVGYAWDMRYLSLHAISRDTSSFPEPCLYCHLDVEDD--VQEVRFVPDDS-SKTLQAMFDAFSASAALNPDDDE------DDEE-----GEWIYNEDEVEAGAQMDIAAHLDSILTVSPAIAQAHGGVAGQFDDAD 192
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A6G0XMC2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMC2_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.380e-23 Identity = 65/157 (41.40%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 55 EGLGSLTVTTTRVVWLSSEDQSKA--FDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLA-HLDSVLVVPEGMEAVNAGQFDDAD 516
+G G+L VTT+RVVW+ S++ S + +D+ Y+ LHAIS+D +FP PC+YCQL VE+E + E F P D E LQALF+AFS++A LNP+ GG +++ + +E LA H DS+L V ++ GQFDDAD
Sbjct: 50 KGSGNLYVTTSRVVWVFSQNGSGVVGYAWDMTYLSLHAISRDLSSFPEPCLYCQLDVEDE--VNEIRFVPQDPEK-QLQALFDAFSESAALNPDXXXXXXX---------XGGDWIYNEEEVSTGAREAALAAHFDSILQVAPSLQQHADGQFDDAD 194
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A8K1C4U2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4U2_PYTOL) HSP 1 Score: 99.0 bits (245), Expect = 2.930e-22 Identity = 60/153 (39.22%), Postives = 90/153 (58.82%), Query Frame = 1
Query: 64 GSLTVTTTRVVWLSSEDQSKA-FDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVLVVPEGMEAVNA-GQFDDAD 516
G+L VTT RV+W+ + + ++V+ I LHAIS+DP FP PC+YCQ+ E+ + E F P++ + L LF A SK+AE+NP+ ++ ++E LGG G + + A ++ AHLDSVL + G+E + GQFDDAD
Sbjct: 65 GTLYVTTKRVLWIGDRTAPRVGYGWEVSQITLHAISRDPAAFPQPCLYCQIGTEK---ISEVRFVPAEDK--QLSELFSALSKSAEMNPDDEEDE----DDENLGGEGDWIYNEDEVENGARAAQIAAHLDSVLHIAPGVEPPSEPGQFDDAD 208
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A0W8CNJ5_PHYNI (Chloride conductance regulatory protein ICln n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CNJ5_PHYNI) HSP 1 Score: 98.2 bits (243), Expect = 4.710e-22 Identity = 60/155 (38.71%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 61 LGSLTVTTTRVVWLSSEDQSKA-FDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVLVVPEGME--AVNAGQFDDAD 516
+G+L VTT+RV+WL + + + ++++ + LHAIS+DP FP PC+YCQ++ ++ + E F P+D + TLQ +F+AFSK+AE+NP+ + E+++ G + + A A ++ AH DS+L V G+E A AGQFDDAD
Sbjct: 61 VGALFVTTSRVIWLGAAVSTHVGYAWEMSSVTLHAISRDPAAFPKPCLYCQISNQD---VSEVRFVPTDDK--TLQEVFDAFSKSAEMNPDDDE------EDDD-----GWICDEDEVADGARAAQLAAHFDSMLQVSPGLETSATEAGQFDDAD 199
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A3R7HKJ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HKJ0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.300e-21 Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 64 GSLTVTTTRVVWLSSE-DQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGSALSAEQERVLAHLDSVL-VVPEGMEAVNAGQFDDAD 516
G+L VTT+RV+WL S + ++++ + LHAIS+DP FP PC+YCQ++ E+ + E F P+D + TLQ +F+AF K+AE+NP+ + E+++ G + + A A ++ AHLDSVL V PE A +GQFDDAD
Sbjct: 106 GALFVTTSRVLWLGSPVGPHIGYGWEISAVTLHAISRDPAAFPKPCLYCQISNED---VSEVRFVPADDK--TLQEVFDAFCKSAEMNPDDDE------EDDD-----GWICDEDEVADGARAAQLAAHLDSVLHVSPEFENAPESGQFDDAD 242
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Match: A0A5D6Y283_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y283_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.390e-21 Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 1
Query: 61 LGSLTVTTTRVVWLSSEDQSKA-FDFDVAYICLHAISKDPGTFPNPCIYCQLAVEEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEPGDEGAGAGEEEELGGVGGGLVFDHGS-ALSAEQERVLAHLDSVLVVPEGMEAVNAGQFDDAD 516
+G+L VT+ RVVW+ + + +D + + LHAIS+D FP PC+YCQ+ + D + E F P D + LQA+F+AFS++AELNP+ G+++ G VFD A A + AHLDSVL V + V AGQFDDAD
Sbjct: 53 VGALFVTSKRVVWIGDRAAAHVGYGWDTSRVTLHAISRDESAFPRPCLYCQV---DSDDVSEIRFVPLDPD--QLQAIFDAFSRSAELNPDDXXXXXXXGDDD-------GWVFDKDEVANGARAAEIAAHLDSVLRVSPALLPV-AGQFDDAD 193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10501.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10501.482.1 >prot_Ecto-sp13_S_contig10501.482.1 ID=prot_Ecto-sp13_S_contig10501.482.1|Name=mRNA_Ecto-sp13_S_contig10501.482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp QVLLRNEEVTLAFSPESPEGLGSLTVTTTRVVWLSSEDQSKAFDFDVAYIback to top mRNA from alignment at Ecto-sp13_S_contig10501:2967..4942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10501.482.1 ID=mRNA_Ecto-sp13_S_contig10501.482.1|Name=mRNA_Ecto-sp13_S_contig10501.482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1976bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10501:2967..4942- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10501:2967..4942- >mRNA_Ecto-sp13_S_contig10501.482.1 ID=mRNA_Ecto-sp13_S_contig10501.482.1|Name=mRNA_Ecto-sp13_S_contig10501.482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10501:2967..4942- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |