mRNA_Ecto-sp13_S_contig1050.476.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1050.476.1
Unique NamemRNA_Ecto-sp13_S_contig1050.476.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 4.640e-217
Identity = 327/370 (88.38%), Postives = 340/370 (91.89%), Query Frame = 1
Query:    1 MYGSMVDSGSAGSSSGGFTYTDRFSIATKDRAQGG*GTRPSFILALVGSLAVVGTAMIAIGSRLLPNTSAVKGAVDPESNAS-SAARRSSSFVEDRPVVGRAFPVASDQDQHXXXXXXXXXXQQGDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGPEGTAT-GGP 1104
            MYGS+VDSG+AGSSSGG TYTDRFSIATKDRAQGG GTRP+FILALVGSLA+VGTAMIAIGSRLLP+TSAVKGAVDPESNAS  AARRSSSFVEDRPVVGRAFP+ASDQDQH          QQGDV PPLSFTALNFYHVR+GKPAQDYPWLKDVKL EPHRETTL VETPRDGF+YRW +LLG PVS TDS P+SS EEEG TEEVVATASGAEAVVVFTHLGENSVSL+EVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMF L EVRVDGGNGKELYG+DYADIYA NRLHYKAASQS+CDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGG EGT   GGP
Sbjct:    3 MYGSIVDSGAAGSSSGGVTYTDRFSIATKDRAQGGRGTRPAFILALVGSLALVGTAMIAIGSRLLPDTSAVKGAVDPESNASLQAARRSSSFVEDRPVVGRAFPIASDQDQHQQQEGQEKRQQQGDVSPPLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFALWEVRVDGGNGKELYGEDYADIYAINRLHYKAASQSSCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGLEGTVDDGGP 372          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.140e-96
Identity = 160/233 (68.67%), Postives = 183/233 (78.54%), Query Frame = 1
Query:  373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDV 1071
            + + PL+F ALNFYH+R+GKPAQDYPWL+DVKL EPHRETTL V +PRDG+ Y W +  G     TD T            EV A+A GAEA++  T L +N ++LKEVNSD G + R+L E VMVKYVRREIRTLTDDEREELFDAMFTL +VRVD GNGKELYGDDYADIYA NRLH+KAA   TCDHFHDGLGFLTSHS+ISNTFE+SLQ+VNPKLTLPYWDFTIE  + 
Sbjct:  122 EEVAPLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGD----TDDT------------EVRASARGAEALITLTILDDNVITLKEVNSD-GEIMRQLDELVMVKYVRREIRTLTDDEREELFDAMFTLWDVRVDTGNGKELYGDDYADIYAINRLHFKAAMSETCDHFHDGLGFLTSHSLISNTFEYSLQRVNPKLTLPYWDFTIEDFEA 337          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 1.970e-96
Identity = 170/269 (63.20%), Postives = 193/269 (71.75%), Query Frame = 1
Query:  277 EDRPVVGRAFPVA--SDQDQHXXXXXXXXXXQ-QGDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVG 1074
            +++  V R FP+A  S + +           Q  G+ +P LSF A NFY +R+GKPAQDYPWLKDVKL EPHRETT  V +PRDGF YRW +  G           S+AE E  TE     A+G E+ VV T L EN V L+EV++D G V RR QEKVMVKYVRREIRTLTDDEREELFDAMFTL  VRVDGGNGKELYGDDYADI+A NRLHYK AS   CDHFHDGLGFLT+H +I+NTFE SLQ VNPKLTLPYWDFTIES+  G
Sbjct:  126 DEKKQVARPFPIADVSPRAEDETPPAAAEDGQLSGEEIPRLSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAG-----------SAAEGELCTE-----ATGPESTVVLTTLDENEVVLEEVDAD-GTVVRRRQEKVMVKYVRREIRTLTDDEREELFDAMFTLWSVRVDGGNGKELYGDDYADIFAINRLHYKGASPYECDHFHDGLGFLTNHIVITNTFEASLQTVNPKLTLPYWDFTIESSTAG 377          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 7.930e-96
Identity = 152/233 (65.24%), Postives = 185/233 (79.40%), Query Frame = 1
Query:  379 LPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGG 1077
            L PLSF A NFYH+R+GKPA DYPWLK+VKL EPHRETT  V +PRDGF+YRW +              + A+++    ++ A ASGAE V++ T L +  + L+EVN++TGVV RRL+EKVMVKYVRRE+RTLTD+EREELFDAM+TL  VRV GGNGKELYGDDYADIYA NRLHYKAAS   CDHFHDGLGF+T+H++I+NTFE+SLQ+VNPKLT+PYWDFTI+ +  GG
Sbjct:  126 LAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVR------------GADADKD----DLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDAMYTLWTVRVKGGNGKELYGDDYADIYAINRLHYKAASPQDCDHFHDGLGFMTNHAVITNTFEYSLQRVNPKLTVPYWDFTIDGSSAGG 342          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 1.110e-95
Identity = 158/232 (68.10%), Postives = 182/232 (78.45%), Query Frame = 1
Query:  370 GDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIEST 1065
            G+    L+FTALNFYHVR+GKP QDYPWLKD KL EPHRETTL VE PR+GF+YRW +    P  T DS  SSS  E    +     A+GA A VV T L EN ++L+EVN   G V RRL+E VMVKYVRREIR+LTDDEREEL DAMFT+ +VRVDGGNGKELYGD YADIYA NRLH+KAA+  TCDHFHDGLGFL SHS+++NTFE+SLQ VNPKLT+PYWDFTIE++
Sbjct:  106 GESDQALAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVR---PTCTGDSCTSSSGGESSPIQ-----AAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDAMFTIWDVRVDGGNGKELYGDGYADIYAINRLHHKAATHGTCDHFHDGLGFLVSHSVLTNTFEYSLQAVNPKLTVPYWDFTIETS 329          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 7.500e-87
Identity = 154/259 (59.46%), Postives = 182/259 (70.27%), Query Frame = 1
Query:  382 PPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFT--HLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGPEGTATGGPSHDRHFSALIGSGLLT 1152
            PPL+F A NFYHVR+GKPA DYPWL+DVKL EPHRETTL V+ PR+GF+YRW+I  G+  S                 +V   ASGAEAVVV    HL EN V+L+EV   TG V RRL E VMVKYVRREIRTLT +EREEL DAM  L  VRV  G+G+E YG++Y+DI+A NRLH+KAAS   CDHFHDGLGFLT+H ++SNTFE SLQ+VNPKLTLPYWDFTIES+         T G + + H   + GS + T
Sbjct:  104 PPLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGGSSAS-----------------KVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDAMLELWNVRVQDGDGREKYGENYSDIWAINRLHFKAASPQFCDHFHDGLGFLTNHGLVSNTFENSLQQVNPKLTLPYWDFTIESS---------TAGIAANEHLDDMFGSKIKT 336          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 8.510e-86
Identity = 146/243 (60.08%), Postives = 178/243 (73.25%), Query Frame = 1
Query:  373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE--STDVGGPEGTAT 1095
            D + PLSF ALNFYH+R+GKPAQDY WL+DVKL EPHRETTL V +PRDG+ Y W +  G               +EG   +++ATASGAEAVV  T L ++ +++KEV  D G + R+L E VMVKYVRREIRTLTD+ER EL DAM  +  VRV GGNG EL+GD YADI + NRLH+KAA   +CDHFHDGLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE    ++ G +   T
Sbjct:   88 DEVAPLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGET-------------DEG---DLIATASGAEAVVTLTVLDDSMITVKEVLPD-GEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQIWTVRVSGGNGIELFGDGYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHEAEIAGDDNEMT 313          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.240e-75
Identity = 146/265 (55.09%), Postives = 171/265 (64.53%), Query Frame = 1
Query:  370 GDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDH-------------------------------FHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDV 1071
            G+V P LSF ALNFYH+R+GKPAQDYPWLK VKL EPHRETTL V +PRDG  Y W +  G              E + A   +VATA GAEAVV  T L +N +++KEV+ D G + RRL E VMVKYVRREIRTLTD+EREEL DAM  L  VRV GGNG E  GD YAD+   +RLH+KAA   +CDH                               FH+GLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE  + 
Sbjct:  116 GEVAP-LSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPRDGHDYIWEVRAG--------------ETDEAN--LVATARGAEAVVTLTTLDDNVITVKEVHPD-GHIVRRLDEVVMVKYVRREIRTLTDEEREELLDAMHQLWVVRVSGGNGIEQDGDGYADMSFISRLHFKAAQNGSCDHVLAEEQGSLLCARGGTLLSAVTQLGDPQNDEFHEGLGFLTSHSMLTNTFEYSLQQVNPKLTVPYWDFTIEYVEA 362          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 7.170e-74
Identity = 134/229 (58.52%), Postives = 161/229 (70.31%), Query Frame = 1
Query:  373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE 1059
            DV+ P   T      +      +DYPWL+DVKL EPHRET L V +PRDG+ Y W +  G              E + A  +++ATASGAEAVV  T L EN +++KEV+ D G + R+L E VMVKYVRREIRTLTD+ER EL DAM  L  VRV GG G ELYGDDYADI + NRLH+KAA   +CDHFHDGLGFLTSHS+++NTFE+SLQ+VNPKLT+PYWDFTIE
Sbjct:   86 DVVIPSDNTPEETIQIAPRPFPKDYPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVRAG--------------ETDEA--DLIATASGAEAVVTLTVLDENMITVKEVHPD-GEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGEGIELYGDDYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSVLTNTFEYSLQRVNPKLTVPYWDFTIE 297          
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 3.450e-49
Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 1
Query:  682 VSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE 1059
            +++KEV+ D G + R+L E VMVKYVRREIRTLTD+ER EL DAM  L  VRV GG G ELYGDDYADI + +RLH+KAA   +CDHFHDGLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE
Sbjct:    2 ITVKEVHPD-GEIVRQLDEIVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGKGIELYGDDYADISSISRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIE 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC42_ECTSI4.640e-21788.38TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A6H5JRR4_9PHAE1.140e-9668.67TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D8LC46_ECTSI1.970e-9663.20Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
A0A6H5J7R8_9PHAE7.930e-9665.24TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LC28_ECTSI1.110e-9568.10TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A6H5J676_9PHAE7.500e-8759.46TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7FW00_ECTSI8.510e-8660.08Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
A0A6H5K485_9PHAE2.240e-7555.09TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G9A4_ECTSI7.170e-7458.52Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
D8LB18_ECTSI3.450e-4971.43ShTK domain containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1050contigEcto-sp13_S_contig1050:129..2364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1169
Hectar predicted targeting categoryno signal peptide or anchor
Exons3
Cds size108
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462535.192665-UTR-Ecto-sp13_S_contig1050:128..3551681462535.192665-UTR-Ecto-sp13_S_contig1050:128..355Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1050 129..355 -
1681462535.201229-UTR-Ecto-sp13_S_contig1050:959..10881681462535.201229-UTR-Ecto-sp13_S_contig1050:959..1088Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1050 960..1088 -
1681462535.2092192-UTR-Ecto-sp13_S_contig1050:1551..22561681462535.2092192-UTR-Ecto-sp13_S_contig1050:1551..2256Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1050 1552..2256 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462535.216875-CDS-Ecto-sp13_S_contig1050:2256..23641681462535.216875-CDS-Ecto-sp13_S_contig1050:2256..2364Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1050 2257..2364 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1050.476.1prot_Ecto-sp13_S_contig1050.476.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1050 2257..2364 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1050.476.1

>prot_Ecto-sp13_S_contig1050.476.1 ID=prot_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MYGSMVDSGSAGSSSGGFTYTDRFSIATKDRAQGG*
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mRNA from alignment at Ecto-sp13_S_contig1050:129..2364-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1050.476.1 ID=mRNA_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1050:129..2364- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACGGGTCTATGGTAGATTCGGGTTCGGCAGGCTCATCCTCCGGGGG GTTCACGTACACCGACCGGTTTTCGATCGCGACGAAAGATAGGGCACAAG GTGGCTGAGGGACACGGCCCAGTTTCATCCTCGCCCTCGTCGGATCCCTC GCCGTCGTTGGCACTGCGATGATTGCGATCGGATCCCGTCTGCTACCGAA TACTTCAGCCGTCAAGGGTGCTGTTGACCCCGAGAGTAACGCATCTTCAG CTGCTCGACGAAGCAGCAGCTTCGTCGAGGATCGTCCAGTAGTCGGCAGG GCATTCCCCGTTGCCTCGGACCAGGACCAGCACCAGCAGCAAGAGGAGCA GGAGAAGCGACAGCAACAGGGAGATGTGTTACCTCCTCTCTCCTTCACCG CGCTCAATTTTTACCACGTGCGGAACGGGAAGCCGGCCCAGGACTACCCC TGGTTGAAAGACGTCAAGCTCACCGAACCGCACCGGGAGACCACGCTATA CGTGGAGACTCCCCGCGACGGATTCAAGTACCGCTGGATGATTTTGCTTG GTACGCCGGTATCAACCACGGACTCCACCCCGTCGTCGTCAGCTGAAGAA GAAGGTGCAACCGAAGAAGTTGTTGCCACCGCTAGCGGAGCAGAGGCCGT CGTTGTTTTCACACACCTGGGCGAAAACTCCGTCTCTCTGAAGGAGGTCA ACTCGGATACAGGGGTGGTTACCCGCCGGCTACAGGAGAAGGTGATGGTG AAGTACGTAAGGAGGGAGATCAGGACTCTCACGGACGACGAGCGAGAGGA GTTGTTCGACGCGGTGAGGAAGTTCGTCGAGCCATAAAGTAGAGTTACAC GGCTGTACAGCTGTTTTGCGAAGTGAGAGGAATTTTCTACTGTAATTGTC ACAGCAGTACGCATATGCAGTTGTTCTGTACGTGCATGTATGTATGCACA GCAGTAGGCTGGACACTGAGTGCATGCGAGGGTCTGCATGTTGATAACAG TAAGGAAGGGTGTACATGGAAGAACGCCACTTTCGAGCCGGGTTTCATCT TCTTGTATTGAGGCTTTTTTTTAAGGTCCCAAACCCAGCTTACGCCGTTC TATTTTTCTTCAAACAACGCAGTTCCTTTCTCTTCGAAATTCACCCGGAG AACTACGATTGCACGCTGTGTGACTACCGTACAATCCTGTAGATTTACAC TGCTGTGTAGTATGTAGTCGCTTTGTAGTCGAGGTCGTGAGTTTTATTCT TCCTTCACGCCCTCGCACAAACGCAGATGTTCACGCTACGGGAGGTGAGA GTGGACGGTGGAAACGGCAAGGAGCTTTACGGGGACGACTACGCTGACAT CTACGCGACAAATCGCCTGCACTACAAGGCGGCCAGTCAAAGCACGTGTG ATCACGTGAGTGAGTGTATGATGACGCGATTGAAACTACCGTATTCGTCT GGCAACCAGCTTGATCATCATGTTGCTTTGGGTGATTGTTGAATTTTGCG TGGGAGACAGTCGCCCGCCCATCTCATATTTCTTATGAAAGCGTGTGTCG CGCACAATCCTCACCACCACCAGCGTGCCGCTATTCCAACGTTTTCTTAC TGAAATGCTGGCGTTTATTCCGGTTTGTGCTTCAGGCCTGTAACGACTTG CGAGAGCTGCAAGGTGCGAGTTAGATGTCTTTCCTTGAATGAACACATTA CCAGCCACGCTTCTAGACAGCAGGACTATCAATGTAATACAGGGCGCAGG GGAGGGGAAGGGGGGGTACTCGCTGTCATGCGCTGCCGTGGTGTCAGACC ATCGATCCTTGATCCTTGCGAAGCTGCAGTGGAGAACACAAATGATTGAA CTGACGACGAGACTGGCAATCATAAAAAAATCCAACCCGCCATTTACGCC ACCTGCCGCTAGGCTGGATGAGTCTCCATCCTCCCAATTCACGCAGTGCT GACGCTGCGAATCTGTTCCACGTTGTGTGTAACTCCCGTGCTTTCTACGG TCCCAACAGTTCCACGACGGTCTGGGCTTCTTGACAAGCCACTCCATGAT CTCTAACACGTTCGAGTTCAGCCTGCAGAAAGTCAACCCCAAGCTGACGT TGCCGTACTGGGACTTCACCATTGAGTCTACTGATGTGGGGGGTCCTGAA GGCACAGCGACGGGGGGCCCCTCACACGATCGCCACTTTTCCGCCCTGAT TGGTTCGGGACTTTTGACCCTGAGGACAACACGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1050:129..2364-

>mRNA_Ecto-sp13_S_contig1050.476.1 ID=mRNA_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1050:129..2364- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACGGGTCTATGGTAGATTCGGGTTCGGCAGGCTCATCCTCCGGGGG
GTTCACGTACACCGACCGGTTTTCGATCGCGACGAAAGATAGGGCACAAG
GTGGCTGA
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