mRNA_Ecto-sp13_S_contig1050.476.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 623 bits (1607), Expect = 4.640e-217 Identity = 327/370 (88.38%), Postives = 340/370 (91.89%), Query Frame = 1
Query: 1 MYGSMVDSGSAGSSSGGFTYTDRFSIATKDRAQGG*GTRPSFILALVGSLAVVGTAMIAIGSRLLPNTSAVKGAVDPESNAS-SAARRSSSFVEDRPVVGRAFPVASDQDQHXXXXXXXXXXQQGDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGPEGTAT-GGP 1104
MYGS+VDSG+AGSSSGG TYTDRFSIATKDRAQGG GTRP+FILALVGSLA+VGTAMIAIGSRLLP+TSAVKGAVDPESNAS AARRSSSFVEDRPVVGRAFP+ASDQDQH QQGDV PPLSFTALNFYHVR+GKPAQDYPWLKDVKL EPHRETTL VETPRDGF+YRW +LLG PVS TDS P+SS EEEG TEEVVATASGAEAVVVFTHLGENSVSL+EVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMF L EVRVDGGNGKELYG+DYADIYA NRLHYKAASQS+CDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGG EGT GGP
Sbjct: 3 MYGSIVDSGAAGSSSGGVTYTDRFSIATKDRAQGGRGTRPAFILALVGSLALVGTAMIAIGSRLLPDTSAVKGAVDPESNASLQAARRSSSFVEDRPVVGRAFPIASDQDQHQQQEGQEKRQQQGDVSPPLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFALWEVRVDGGNGKELYGEDYADIYAINRLHYKAASQSSCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGLEGTVDDGGP 372
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 313 bits (803), Expect = 1.140e-96 Identity = 160/233 (68.67%), Postives = 183/233 (78.54%), Query Frame = 1
Query: 373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDV 1071
+ + PL+F ALNFYH+R+GKPAQDYPWL+DVKL EPHRETTL V +PRDG+ Y W + G TD T EV A+A GAEA++ T L +N ++LKEVNSD G + R+L E VMVKYVRREIRTLTDDEREELFDAMFTL +VRVD GNGKELYGDDYADIYA NRLH+KAA TCDHFHDGLGFLTSHS+ISNTFE+SLQ+VNPKLTLPYWDFTIE +
Sbjct: 122 EEVAPLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGD----TDDT------------EVRASARGAEALITLTILDDNVITLKEVNSD-GEIMRQLDELVMVKYVRREIRTLTDDEREELFDAMFTLWDVRVDTGNGKELYGDDYADIYAINRLHFKAAMSETCDHFHDGLGFLTSHSLISNTFEYSLQRVNPKLTLPYWDFTIEDFEA 337
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.970e-96 Identity = 170/269 (63.20%), Postives = 193/269 (71.75%), Query Frame = 1
Query: 277 EDRPVVGRAFPVA--SDQDQHXXXXXXXXXXQ-QGDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVG 1074
+++ V R FP+A S + + Q G+ +P LSF A NFY +R+GKPAQDYPWLKDVKL EPHRETT V +PRDGF YRW + G S+AE E TE A+G E+ VV T L EN V L+EV++D G V RR QEKVMVKYVRREIRTLTDDEREELFDAMFTL VRVDGGNGKELYGDDYADI+A NRLHYK AS CDHFHDGLGFLT+H +I+NTFE SLQ VNPKLTLPYWDFTIES+ G
Sbjct: 126 DEKKQVARPFPIADVSPRAEDETPPAAAEDGQLSGEEIPRLSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAG-----------SAAEGELCTE-----ATGPESTVVLTTLDENEVVLEEVDAD-GTVVRRRQEKVMVKYVRREIRTLTDDEREELFDAMFTLWSVRVDGGNGKELYGDDYADIFAINRLHYKGASPYECDHFHDGLGFLTNHIVITNTFEASLQTVNPKLTLPYWDFTIESSTAG 377
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 311 bits (798), Expect = 7.930e-96 Identity = 152/233 (65.24%), Postives = 185/233 (79.40%), Query Frame = 1
Query: 379 LPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGG 1077
L PLSF A NFYH+R+GKPA DYPWLK+VKL EPHRETT V +PRDGF+YRW + + A+++ ++ A ASGAE V++ T L + + L+EVN++TGVV RRL+EKVMVKYVRRE+RTLTD+EREELFDAM+TL VRV GGNGKELYGDDYADIYA NRLHYKAAS CDHFHDGLGF+T+H++I+NTFE+SLQ+VNPKLT+PYWDFTI+ + GG
Sbjct: 126 LAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVR------------GADADKD----DLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDAMYTLWTVRVKGGNGKELYGDDYADIYAINRLHYKAASPQDCDHFHDGLGFMTNHAVITNTFEYSLQRVNPKLTVPYWDFTIDGSSAGG 342
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.110e-95 Identity = 158/232 (68.10%), Postives = 182/232 (78.45%), Query Frame = 1
Query: 370 GDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIEST 1065
G+ L+FTALNFYHVR+GKP QDYPWLKD KL EPHRETTL VE PR+GF+YRW + P T DS SSS E + A+GA A VV T L EN ++L+EVN G V RRL+E VMVKYVRREIR+LTDDEREEL DAMFT+ +VRVDGGNGKELYGD YADIYA NRLH+KAA+ TCDHFHDGLGFL SHS+++NTFE+SLQ VNPKLT+PYWDFTIE++
Sbjct: 106 GESDQALAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVR---PTCTGDSCTSSSGGESSPIQ-----AAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDAMFTIWDVRVDGGNGKELYGDGYADIYAINRLHHKAATHGTCDHFHDGLGFLVSHSVLTNTFEYSLQAVNPKLTVPYWDFTIETS 329
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 288 bits (737), Expect = 7.500e-87 Identity = 154/259 (59.46%), Postives = 182/259 (70.27%), Query Frame = 1
Query: 382 PPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFT--HLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGPEGTATGGPSHDRHFSALIGSGLLT 1152
PPL+F A NFYHVR+GKPA DYPWL+DVKL EPHRETTL V+ PR+GF+YRW+I G+ S +V ASGAEAVVV HL EN V+L+EV TG V RRL E VMVKYVRREIRTLT +EREEL DAM L VRV G+G+E YG++Y+DI+A NRLH+KAAS CDHFHDGLGFLT+H ++SNTFE SLQ+VNPKLTLPYWDFTIES+ T G + + H + GS + T
Sbjct: 104 PPLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGGSSAS-----------------KVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDAMLELWNVRVQDGDGREKYGENYSDIWAINRLHFKAASPQFCDHFHDGLGFLTNHGLVSNTFENSLQQVNPKLTLPYWDFTIESS---------TAGIAANEHLDDMFGSKIKT 336
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 283 bits (725), Expect = 8.510e-86 Identity = 146/243 (60.08%), Postives = 178/243 (73.25%), Query Frame = 1
Query: 373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE--STDVGGPEGTAT 1095
D + PLSF ALNFYH+R+GKPAQDY WL+DVKL EPHRETTL V +PRDG+ Y W + G +EG +++ATASGAEAVV T L ++ +++KEV D G + R+L E VMVKYVRREIRTLTD+ER EL DAM + VRV GGNG EL+GD YADI + NRLH+KAA +CDHFHDGLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE ++ G + T
Sbjct: 88 DEVAPLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGET-------------DEG---DLIATASGAEAVVTLTVLDDSMITVKEVLPD-GEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQIWTVRVSGGNGIELFGDGYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHEAEIAGDDNEMT 313
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.240e-75 Identity = 146/265 (55.09%), Postives = 171/265 (64.53%), Query Frame = 1
Query: 370 GDVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDH-------------------------------FHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDV 1071
G+V P LSF ALNFYH+R+GKPAQDYPWLK VKL EPHRETTL V +PRDG Y W + G E + A +VATA GAEAVV T L +N +++KEV+ D G + RRL E VMVKYVRREIRTLTD+EREEL DAM L VRV GGNG E GD YAD+ +RLH+KAA +CDH FH+GLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE +
Sbjct: 116 GEVAP-LSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPRDGHDYIWEVRAG--------------ETDEAN--LVATARGAEAVVTLTTLDDNVITVKEVHPD-GHIVRRLDEVVMVKYVRREIRTLTDEEREELLDAMHQLWVVRVSGGNGIEQDGDGYADMSFISRLHFKAAQNGSCDHVLAEEQGSLLCARGGTLLSAVTQLGDPQNDEFHEGLGFLTSHSMLTNTFEYSLQQVNPKLTVPYWDFTIEYVEA 362
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 252 bits (643), Expect = 7.170e-74 Identity = 134/229 (58.52%), Postives = 161/229 (70.31%), Query Frame = 1
Query: 373 DVLPPLSFTALNFYHVRNGKPAQDYPWLKDVKLTEPHRETTLYVETPRDGFKYRWMILLGTPVSTTDSTPSSSAEEEGATEEVVATASGAEAVVVFTHLGENSVSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE 1059
DV+ P T + +DYPWL+DVKL EPHRET L V +PRDG+ Y W + G E + A +++ATASGAEAVV T L EN +++KEV+ D G + R+L E VMVKYVRREIRTLTD+ER EL DAM L VRV GG G ELYGDDYADI + NRLH+KAA +CDHFHDGLGFLTSHS+++NTFE+SLQ+VNPKLT+PYWDFTIE
Sbjct: 86 DVVIPSDNTPEETIQIAPRPFPKDYPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVRAG--------------ETDEA--DLIATASGAEAVVTLTVLDENMITVKEVHPD-GEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGEGIELYGDDYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSVLTNTFEYSLQRVNPKLTVPYWDFTIE 297
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 183 bits (464), Expect = 3.450e-49 Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 1
Query: 682 VSLKEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFTLREVRVDGGNGKELYGDDYADIYATNRLHYKAASQSTCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIE 1059
+++KEV+ D G + R+L E VMVKYVRREIRTLTD+ER EL DAM L VRV GG G ELYGDDYADI + +RLH+KAA +CDHFHDGLGFLTSHSM++NTFE+SLQ+VNPKLT+PYWDFTIE
Sbjct: 2 ITVKEVHPD-GEIVRQLDEIVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGKGIELYGDDYADISSISRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIE 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1050.476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1050.476.1 >prot_Ecto-sp13_S_contig1050.476.1 ID=prot_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp MYGSMVDSGSAGSSSGGFTYTDRFSIATKDRAQGG*back to top mRNA from alignment at Ecto-sp13_S_contig1050:129..2364- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1050.476.1 ID=mRNA_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1050:129..2364- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1050:129..2364- >mRNA_Ecto-sp13_S_contig1050.476.1 ID=mRNA_Ecto-sp13_S_contig1050.476.1|Name=mRNA_Ecto-sp13_S_contig1050.476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1050:129..2364- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |