mRNA_Ecto-sp13_S_contig10483.461.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: D8LDH9_ECTSI (Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=D8LDH9_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.200e-63 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1
Query: 4 AATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 2 AATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 135
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A813A1S0_SYMMI (Calmodulin n=15 Tax=Sar TaxID=2698737 RepID=A0A813A1S0_SYMMI) HSP 1 Score: 186 bits (471), Expect = 7.020e-58 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 1
Query: 7 ATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
A + GG KSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXX FLEMMT+KMSE+DSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 2 AAKRAGGGKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXXFLEMMTAKMSERDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 134
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A1V9ZCQ4_9STRA (Caltractin n=6 Tax=Stramenopiles TaxID=33634 RepID=A0A1V9ZCQ4_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.250e-57 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 1
Query: 28 AKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 16 AKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 141
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A024GNG8_9STRA (Uncharacterized protein n=21 Tax=Stramenopiles TaxID=33634 RepID=A0A024GNG8_9STRA) HSP 1 Score: 181 bits (460), Expect = 4.550e-56 Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 1
Query: 16 KRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
K AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX EFLEMMT+KMSEKDS+EEI+KAFRLFDDDETGKI+FRNLKRVAKELGENMTDEELQ
Sbjct: 15 KGNAAKTKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTTKMSEKDSKEEIIKAFRLFDDDETGKITFRNLKRVAKELGENMTDEELQ 144
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A3R7A958_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A3R7A958_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.030e-55 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 1
Query: 28 AKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 164 AKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 289
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A0M0JBM6_9EUKA (Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=A0A0M0JBM6_9EUKA) HSP 1 Score: 177 bits (450), Expect = 1.130e-54 Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1
Query: 7 ATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AT+K+GG K+ K ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP XXXXXXXXXXXXXXXXXXXXXXEFL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGENMTDEELQ
Sbjct: 4 ATAKKGG-KTGKAELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPXXXXXXXXXXXXXXXXXXXXXXXEFLQMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQ 135
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A8J2SHF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHF6_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.980e-54 Identity = 125/133 (93.98%), Postives = 126/133 (94.74%), Query Frame = 1
Query: 7 ATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AT G SKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXX FLEMMT+KMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 76 ATMAPGKKSSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXXFLEMMTAKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 208
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A7S3C3I2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C3I2_9EUKA) HSP 1 Score: 175 bits (444), Expect = 1.400e-53 Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 19 RGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
+G K K ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGENMTDEELQ
Sbjct: 20 KGRGKGGKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLQMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQ 148
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A3R6VX05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VX05_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.500e-53 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 1
Query: 28 AKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 405
AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ
Sbjct: 465 AKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQ 590
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Match: A0A5A8D4X3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4X3_CAFRO) HSP 1 Score: 172 bits (437), Expect = 1.140e-52 Identity = 115/130 (88.46%), Postives = 121/130 (93.08%), Query Frame = 1
Query: 13 SKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEEL 402
S RG K KFELTEEQ+QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK XXXXXXXXXXXXXXXXXXX FL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGE+MTD+EL
Sbjct: 7 SARGARKGGKFELTEEQRQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKAEXXXXXXXXXXXXXXXXXXXXFLDMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGESMTDDEL 136 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10483.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10483.461.1 >prot_Ecto-sp13_S_contig10483.461.1 ID=prot_Ecto-sp13_S_contig10483.461.1|Name=mRNA_Ecto-sp13_S_contig10483.461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp QAATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRback to top mRNA from alignment at Ecto-sp13_S_contig10483:1977..4182+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10483.461.1 ID=mRNA_Ecto-sp13_S_contig10483.461.1|Name=mRNA_Ecto-sp13_S_contig10483.461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10483:1977..4182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10483:1977..4182+ >mRNA_Ecto-sp13_S_contig10483.461.1 ID=mRNA_Ecto-sp13_S_contig10483.461.1|Name=mRNA_Ecto-sp13_S_contig10483.461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=411bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10483:1977..4182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |