mRNA_Ecto-sp13_S_contig1048.455.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 231 bits (589), Expect = 2.350e-64 Identity = 117/150 (78.00%), Postives = 130/150 (86.67%), Query Frame = 2
Query: 5 RTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYIPMET 454
RTRC+DAFV+ALS+ C+GG+KRWYAS LELQLTSLD+CRACR+TSILHV V+DQTP+SLWSSRTAQTRPN RS L SRVPV+RALRLTWALSME LLRKAA ELWT S+RLEL GSSC +SLGSEV WP GLT LVL+TDS I M T
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGT 157
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 192 bits (488), Expect = 6.050e-55 Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 2
Query: 2 GRTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYIPME 451
G TR DAF +ALS+ C+GG+KRWY S ELQL SLD+CRACRST LHVRV TP SLWS T Q PN +SSK+R +SRVPV+RALRLTWA SME L+++AA ELW+ S+RLE+ G CAASLGS V WP GLT LVL TD +IPME
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVV-WPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.990e-32 Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 2
Query: 11 RCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYI-PMETAS*PVHLQYLALRGRFNQ 508
RC+DAFVVALS+ +GG+KRWY S L+LQL SL+ C ACRST +LHV V+ +TP +LWS Q P A +S +RVP ++A+ LTWA E L A+ ELWT + L+LQ S C A+L S V WP GL LV+ +I P+E S P L+ L G F+Q
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS--LGQANPTAGTS-----TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVV-WPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.760e-31 Identity = 84/174 (48.28%), Postives = 105/174 (60.34%), Query Frame = 2
Query: 2 GRTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYIPMETAS*PVHLQYLALRGRFNQPIAGV 523
G ++C+DAFVVAL++ C G +KRWY S LELQL SL++C ACR LHVRV QTP SLW T N RS K+ SRVPV++A LTWAL M L +++A E+ + S S AASL S V WP L +V +D + + TAS P LQ L+ FNQ I GV
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAV-WPQRLKRMVFESD--MTVNTASWPASLQQLSFGCGFNQAIVGV 175
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 134 bits (338), Expect = 5.890e-31 Identity = 80/169 (47.34%), Postives = 102/169 (60.36%), Query Frame = 2
Query: 2 GRTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYIPMETAS*PVHLQYLALRGRFNQ 508
GR+ C+ AF+VAL++ C G +KRWYAS LELQL SL+ C ACR LHVRV+ QTP+SLWS + RS + +RVP ++A LTWAL ME LL+ +A EL + S+ + G+S ASLGS L LV DS +P TAS P L L RF+Q
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVF--DSDMPASTASWPASLPQLLFGDRFDQ 179
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.910e-28 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 2
Query: 17 IDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLV 421
+D +VAL++ C G +KRWY S LELQL SL++C ACRS +LHV V + TP +LWSSRT++T P+ RS ++ T +RVP ++AL TWAL M+ L ++AA E ++R G S AAS+ S V WP L LV
Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVV-WPESLKRLV 223
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.620e-23 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 2
Query: 2 GRTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTLSRVPVL 259
G T+C DAFVVALS+ C+GG KR Y S LEL L SLD+CRA RSTS LHVRV QTP+S WS Q RP+ SSK+R SRVPV+
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 113 bits (282), Expect = 7.210e-23 Identity = 72/171 (42.11%), Postives = 89/171 (52.05%), Query Frame = 2
Query: 2 GRTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKLRTL----------------------------SRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHT 430
G +R DA ++A+S+ +G KRWY S LEL+L SL+ CRACR +HVRV+ TP SLWS TR + RSSK R SRVPV +AL LTWAL E LL+ A ELWT + L+L+ S + L S V WP L L L T
Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVS-VAWPQNLKRLALET 174
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 105 bits (262), Expect = 7.890e-21 Identity = 67/156 (42.95%), Postives = 86/156 (55.13%), Query Frame = 2
Query: 68 RWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSS-----KLRTLSRVPVLRALRLTWALSMEDLLRKAAFELWTSSQRLELQGSSCAASLGSEVDWPHGLTHLVLHTDSYIPMETAS*PVHLQYLALRGRFNQPIAG 520
RW+ S L +QL SL+ CRA RS + + V+ + P+SLW R +QT + R K R LSRVP++RA RL W LSME LL+ A ELWT + L L G AS S V P L L + D+ +E P LQ L+ FN+PIAG
Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQ-PQRLEQLEGNKDARDSVEAVPWPAFLQKLSFGFPFNRPIAG 158
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 8.550e-19 Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 2
Query: 5 RTRCIDAFVVALSEPCKGGKKRWYASILELQLTSLDMCRACRSTSILHVRVNDQTPQSLWSSRTAQTRPNARSSKL 232
R++C+DAFVVAL++ C G +KRWYAS LELQL SL+ C ACR LHVRV+ +TP+SLWS RT + RS K+
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1048.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1048.455.1 >prot_Ecto-sp13_S_contig1048.455.1 ID=prot_Ecto-sp13_S_contig1048.455.1|Name=mRNA_Ecto-sp13_S_contig1048.455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=375bp MVRVQLRSARCRSRVVVLPATAIVRVLLQSAHFRSGMAILAAPAIVREQLback to top mRNA from alignment at Ecto-sp13_S_contig1048:2184..3923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1048.455.1 ID=mRNA_Ecto-sp13_S_contig1048.455.1|Name=mRNA_Ecto-sp13_S_contig1048.455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1740bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1048:2184..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1048:2184..3923+ >mRNA_Ecto-sp13_S_contig1048.455.1 ID=mRNA_Ecto-sp13_S_contig1048.455.1|Name=mRNA_Ecto-sp13_S_contig1048.455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1125bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1048:2184..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |