mRNA_Ecto-sp13_S_contig10469.446.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 1.330e-138 Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETFTNVLAV 654
VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLA VTAASLKLTDLGFVNSFGGALIGSGIV+VFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETFTNVLAV
Sbjct: 302 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETFTNVLAV 519
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A7S3XNB8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNB8_HETAK) HSP 1 Score: 190 bits (483), Expect = 2.550e-56 Identity = 106/223 (47.53%), Postives = 145/223 (65.02%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQ-------KREMSLNAGIVAAGVAMGVLGCVISVLETFTNVL 648
+LVSMLSTA+ AH+NAP FY +LK+ +VPRY+K+V SF ++ ++ AFGFLTFGGAS G++LNNY+ D L T+ARV + S++F YPL FVGLRDG+ + G +++ +VGLL T ASL L +LGFV+SFGGAL GS ++++FP LM + KDK A G+ +RE LN+ I GV +G +G +SVL+ FT VL
Sbjct: 105 ILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLM----MNAAIKDKT-----AKGEWEMTPQLQREQLLNSFICGLGVLLGGVGATVSVLKNFTKVL 318
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 190 bits (483), Expect = 1.710e-54 Identity = 106/223 (47.53%), Postives = 145/223 (65.02%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQ-------KREMSLNAGIVAAGVAMGVLGCVISVLETFTNVL 648
+LVSMLSTA+ AH+NAP FY +LK+ +VPRY+K+V SF ++ ++ AFGFLTFGGAS G++LNNY+ D L T+ARV + S++F YPL FVGLRDG+ + G +++ +VGLL T ASL L +LGFV+SFGGAL GS ++++FP LM + KDK A G+ +RE LN+ I GV +G +G +SVL+ FT VL
Sbjct: 280 ILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLM----MNAAIKDKT-----AKGEWEMTPQLQREQLLNSFICGLGVLLGGVGATVSVLKNFTKVL 493
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A7S0Y8T3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8T3_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.110e-54 Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLG 609
+ +SMLSTA+ AHFNAP FY ELKD T+P+Y K+VSTSF S++ V A GFLTFG SSG ILNNY+T D L ++R+AVA SLVFSYPL FVG RDG+ ++ K G + + TV LL+ +T A+L + D+ FV + GA +G+G+++VFPALMF + +K A A G+KRE+ G AG+ MG++G
Sbjct: 182 IFISMLSTAFMAHFNAPKFYNELKDKTLPKYYKVVSTSFAVSISLFALVAAIGFLTFGANSSGLILNNYSTRDGLMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMK-GTDKTQNILTVALLSVITGAALVIPDVSFVMAIAGATLGNGLIYVFPALMFRGAIKKK-------ADATKGEKREVKFALGSALAGICMGIVG 376
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A7S0G8J5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8J5_9STRA) HSP 1 Score: 184 bits (466), Expect = 6.170e-53 Identity = 102/206 (49.51%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNR---TRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLG 609
+L+ MLSTAY +HFNAP FY ELKDNT+ RY+ +V TSF S++ AV A GFLTFG S+G ILNNYA TD L + +R+AVA S+VFSYPL FVGLRDG+ ++ KP E R+ + TVG+LA +TAA+LK+ DL FV +F GA +G+ +++++P MF + + K D+A G K E + + A GV MG +G
Sbjct: 188 ILICMLSTAYMSHFNAPKFYLELKDNTIKRYNTVVGTSFAVSISIFIAVAALGFLTFGANSNGLILNNYANTDMLMSASRIAVAISIVFSYPLAFVGLRDGLLDLAN-KPLEERSNDLLNKLTVGILAVITAAALKVKDLSFVLAFSGATLGNALIYMYPVFMF-RAAVAKMGDQATK-----GLKSEAKASLFVAALGVVMGGIG 386
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A448ZEV0_9STRA (Aa_trans domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEV0_9STRA) HSP 1 Score: 186 bits (472), Expect = 7.880e-53 Identity = 100/203 (49.26%), Postives = 139/203 (68.47%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLG 609
+ +SMLSTA+ AHFNAP FY ELKD T+P+Y K+VSTSF S++ V + GFLTFG +S+G ILNNY+T D L ++R+AVA SLVFSYPL FVG RDG+ ++ K G + + TV LL+A+T +L L D+ FV + GA +G+G++++FPALM+ + ++K D A G+KRE+ G AAG+ MG+LG
Sbjct: 297 IFISMLSTAFMAHFNAPKFYNELKDKTLPKYYKVVSTSFAISISLFALVASVGFLTFGASSNGLILNNYSTRDSLMNLSRIAVAVSLVFSYPLAFVGARDGVSDLLKIK-GTEKTQNVLTVALLSAITGIALVLPDVSFVMALAGATLGNGLIYIFPALMY-RGAIKKKPD------ATKGEKREVKFALGSAAAGIVMGILG 491
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A7S2R064_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R064_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.130e-52 Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRT---RWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETF 636
+L+SMLSTA+ AHFNAP FY ELKDNT+ RY+ +V++SF S A A+ GFLTFG ASSG ILNNYA D L +++RVAVA SLVFSYPL F G RDG ++ P E R + + TVG+L VT +L L DL FV SFGGA +G+ +++V+PALMF K + + DKA + G KRE++ G GVAMGV+G +++ F
Sbjct: 290 ILISMLSTAFMAHFNAPKFYVELKDNTIKRYNILVTSSFAISTAIFAAIAGAGFLTFGSASSGLILNNYANKDILMSLSRVAVAISLVFSYPLIFSGCRDGFLDLANV-PVEKRTNSLLNKVTVGILTGVTGLALVLKDLTFVLSFGGATLGNALIYVYPALMFRKAV-QNMGDKA-----SKGLKREVNFALGTAGLGVAMGVVGAKMALKSLF 497
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A7S2G3A0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3A0_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.500e-52 Identity = 104/206 (50.49%), Postives = 137/206 (66.50%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGA---KPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLG 609
+L+ MLSTAY AHFNAP FY ELKDNT+ RY+ +V++SF S+A M + A GF+TFG +SS ILNNYAT D L +++R+AVA SLVFSYPL F GLRDG +M G K + + T GLL+ VT +L + DLGFV SFGGA +G+ +++VFPALMF K + + DKA + G +RE+ L G+ MG +G
Sbjct: 232 ILICMLSTAYMAHFNAPKFYNELKDNTIKRYNTVVASSFGVSIALMAVIGALGFMTFGASSSPLILNNYATKDGLMSLSRIAVALSLVFSYPLAFAGLRDGFMDMAGVSKEKKADPAFLNKVTAGLLSGVTGLALVVKDLGFVMSFGGATLGNALIYVFPALMFRKAV-KDMGDKA-----SKGLRREVWLAVFSGCLGIVMGGIG 431
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.900e-52 Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETF 636
VLVSMLST++ AH+NAP FY EL++ ++P+ +K+V SF A + G+LTFGGAS G ILNNYA D LA + R+A+ +S+VF YPL FVG+RDG+ + G K R +T T+ LLA V+ ++ L D+GFV S GGAL+GS I+++FPA++F+K + +K V A KRE+ LN GI A GV + ++G +SVL+ F
Sbjct: 302 VLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVKNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVAKGEVVETPAV--KREVLLNKGITALGVLLAIIGATVSVLKAF 511
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Match: A0A1E7FDI6_9STRA (Aa_trans-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDI6_9STRA) HSP 1 Score: 182 bits (461), Expect = 4.870e-52 Identity = 98/203 (48.28%), Postives = 134/203 (66.01%), Query Frame = 1
Query: 1 VLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVFVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLG 609
+LVSMLSTAY AHFNAP FY LKD T+P+Y K+VSTSF S++ + + GFLTFG +SSG ILNNY+T D + ++R+AVA SLVFSYPL FVG RDG+ ++ K G + + TV LL+ +T +L + D+ FV + GA +G+G+++VFP LMF + +K A G+KRE+ L G G+ MG+LG
Sbjct: 207 ILVSMLSTAYMAHFNAPKFYNGLKDKTLPKYYKVVSTSFAISISIFALIASIGFLTFGSSSSGLILNNYSTRDGIMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMK-GTAKTQNVLTVALLSGITGLALVIPDVSFVMALAGATLGNGLIYVFPFLMFRGAIKKKVD-------ATKGEKREVKLAMGSAILGILMGILG 401 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10469.446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10469.446.1 >prot_Ecto-sp13_S_contig10469.446.1 ID=prot_Ecto-sp13_S_contig10469.446.1|Name=mRNA_Ecto-sp13_S_contig10469.446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp MLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFback to top mRNA from alignment at Ecto-sp13_S_contig10469:4545..5808- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10469.446.1 ID=mRNA_Ecto-sp13_S_contig10469.446.1|Name=mRNA_Ecto-sp13_S_contig10469.446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10469:4545..5808- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10469:4545..5808- >mRNA_Ecto-sp13_S_contig10469.446.1 ID=mRNA_Ecto-sp13_S_contig10469.446.1|Name=mRNA_Ecto-sp13_S_contig10469.446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10469:4545..5808- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |