mRNA_Ecto-sp13_S_contig10465.442.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10465.442.1
Unique NamemRNA_Ecto-sp13_S_contig10465.442.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 604 bits (1558), Expect = 1.910e-216
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 1 
Query:    1 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDST+ALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL
Sbjct:   41 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 344
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 5.030e-179
Identity = 251/304 (82.57%), Postives = 275/304 (90.46%), Query Frame = 1 
Query:    4 LSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            L M    KDSY + LLPGDGIGPEIT ATV A++P   LFK+ FKEALIGGAAIDA GSP+PD+T    KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR  LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+   SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPL
Sbjct:   38 LHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPL 341
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)

HSP 1 Score: 457 bits (1176), Expect = 4.660e-159
Identity = 227/305 (74.43%), Postives = 259/305 (84.92%), Query Frame = 1 
Query:    4 LSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            +SM  + KD Y +  LPGDGIGPEI A  + A + +     F++ +KEALIGGAA+DA   P PD+T+   +ASDS LLAAIGGPKWD NPRELRPETGLL MR +LGLFANLRPA V+ +LVDAS+LKPE+++GVDIMVVRELTGDVYFG PKGI+E   GER G+NNM Y E E+ RIAKVA+D+AMKRGK++CSVDKANVLDVSQLWRDVVI+ +  YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGV+EPCHGSAPDIAG DKANPL
Sbjct:   17 VSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEER-DGERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIEEAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPL 320
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)

HSP 1 Score: 457 bits (1176), Expect = 1.110e-158
Identity = 227/302 (75.17%), Postives = 259/302 (85.76%), Query Frame = 1 
Query:   10 MVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            M  E KDSYD+ LL GDGIGPEIT ATV AL PL+ L FK+NFKEALIGGAA+DA   P+PD ++   K SDS+LL+ IGG KWD NPRELRPETGLL MR ++GLFANLRPAKV+ +L+ AS+LK E++EGVDIMVVRELTGDVYFGTPKG  E   G+RV YNNMIY E E+ RIAKVA+DVAMKRGK + S+DKANVLDVSQLWRDVVI+ S++YPEVEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+P GPGVFEPCHGSAPDIAG+DKANPL
Sbjct:   34 MAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGT-ETRDGKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKNYPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPL 334
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)

HSP 1 Score: 450 bits (1158), Expect = 6.720e-156
Identity = 230/305 (75.41%), Postives = 254/305 (83.28%), Query Frame = 1 
Query:    4 LSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            LSM  + KDSY V  LPGDGIGPEI AATV   + + +   FK+ FKEALIGGAA+DA   P+PD T+   K+SDS+LLAAIGGPKWD NPR+ RPETGLL MR  LGLFANLRPA V+ +L DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI     GER GYNNM Y E EV RIAKVA+D+A KRGKR+CSVDKANVLDVSQLWRDVVI+  +DYP+VEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGVFEP HGSAPDIAG DKANPL
Sbjct:   47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPL 350
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)

HSP 1 Score: 444 bits (1143), Expect = 5.010e-154
Identity = 228/303 (75.25%), Postives = 251/303 (82.84%), Query Frame = 1 
Query:   10 MVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            M    KDSYDV LLPGDGIGPEI  A V A + + +   F +NFKEALIGGAA+DA   P PD T+   KASDS+LLAAIGGPKWD NPRELRPETGLL MR  LGLFANLRPA V+ +L+DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI     GER G+NNM Y E EV RIAKVA+D+A KRG ++CSVDKANVLDVSQLWRDVVI+    YP+VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAGQDKANPL
Sbjct:   20 MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIEEHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPL 321
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 5.110e-154
Identity = 220/299 (73.58%), Postives = 250/299 (83.61%), Query Frame = 1 
Query:   25 KDSYDVMLLPGDGIGPEITAATVNALEPLQSL---FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            K+   + LLPGDGIGPEIT ATV  LE L         +F EALIGGAA+DA   P+P+ T+   ++SDS+LLA IGGPKWDGNPR+ RPETGLLAMR  +GLFANLRPAKV+ +LVDAS+LK EIVEGVDIMVVRELTGDVYFG PKGID L  GERVGYNNMIY E E++RIA+VAYDV++KR K+LCS+DKANVLDVSQLWRD V  +  ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G P  PGVFEPCHGSAPDIAG+DKANPL
Sbjct:   55 KEVSKITLLPGDGIGPEITVATVKVLETLAECKGDLSFDFNEALIGGAALDAVDDPFPEETLNSCQSSDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDVSQLWRDKVTSIGAEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASLGEPSSPGVFEPCHGSAPDIAGEDKANPL 353
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S2P3R3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3R3_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 2.880e-153
Identity = 225/302 (74.50%), Postives = 255/302 (84.44%), Query Frame = 1 
Query:   16 TEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLF--KLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSE-DYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            T  KDSYD+ LLPGDGIGPEIT AT   L+ L   F  KLN KEALIGGAAIDA+  P+PD ++    + DS+LLA IGG KWD NPRELRPETGLL MR ++GLFANLRPA V+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGID +  GERVGYNNMIY E E++RIA+VA DVA KRG +LCSVDKANVLDVSQLWR+VV  + E ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G  DGPGVFEPCHGSAPDIAG+DKANPL
Sbjct:   14 TSKKDSYDITLLPGDGIGPEITTATTKVLQTLTERFNFKLNLKEALIGGAAIDAKNDPFPDESLQQCLSGDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAVVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVV-DGERVGYNNMIYSESEIKRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVVTDICEKEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-DGPGVFEPCHGSAPDIAGEDKANPL 313
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA)

HSP 1 Score: 442 bits (1136), Expect = 1.590e-152
Identity = 229/299 (76.59%), Postives = 253/299 (84.62%), Query Frame = 1 
Query:   28 DSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELP-SGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIK-MSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            +SY V +L GDGIGPEI+ AT   L  L     F+L  K ALIGG AIDA  SP+PD ++A  ++SDS+LLA IGGPKWDGNPRELRPE+GLL MR ++GLFANLRPAKVM +LVDAS+LK EIVEGVD+MVVRELTGDVYFG PKGID  P +GERVGYNNMIY E EV RIAKVA DVAMKRGK+LCSVDKANVLDVSQLWRDV I  M +DYPEV+L+H YVDNAAMQLIRWPKQFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G  +GPGVFEP HGSAPDIAGQD ANPL
Sbjct:   46 ESYSVTILEGDGIGPEISTATKKVLAALTKRCGFELELKPALIGGCAIDAANSPFPDESLAQCRSSDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDVSQLWRDVTIDVMEKDYPEVDLSHMYVDNAAMQLIRWPKQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGL-EGPGVFEPIHGSAPDIAGQDVANPL 343
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BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Match: A0A1Z5JD77_FISSO (3-isopropylmalate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD77_FISSO)

HSP 1 Score: 441 bits (1133), Expect = 4.690e-152
Identity = 225/299 (75.25%), Postives = 257/299 (85.95%), Query Frame = 1 
Query:   25 KDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKM-SEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPL 912
            KDSY V LLPGDGIGPEITAAT   L+ L +   F++ +KEALIGGAAIDA+  P+P  ++    ASDS+LLA IGG KWD NPRELRPETGLL MR ++GLFANLRPAKV+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGID + +G+RVGYNNMIY E E++RIA+VA DVA KRG +LCSVDKANVLDVSQLWRDVV  + ++D+PEVEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G   GPGVFEPCHGSAPDIAGQDKANPL
Sbjct:   42 KDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGID-MVNGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPEVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPL 338
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10465.442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G282_ECTSI1.910e-21699.673-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A835ZK29_9STRA5.030e-17982.573-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
A0A7S0Z0Z5_9CRYP4.660e-15974.433-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis... [more]
A0A6V1T6U9_HETAK1.110e-15875.173-isopropylmalate dehydrogenase n=1 Tax=Heterosigm... [more]
A0A7S0F2Y7_9CRYP6.720e-15675.413-isopropylmalate dehydrogenase n=3 Tax=Geminigera... [more]
A0A7S0N7T0_9CRYP5.010e-15475.253-isopropylmalate dehydrogenase n=1 Tax=Cryptomona... [more]
A0A7S2RSG3_9STRA5.110e-15473.583-isopropylmalate dehydrogenase n=1 Tax=Rhizochrom... [more]
A0A7S2P3R3_9STRA2.880e-15374.503-isopropylmalate dehydrogenase n=1 Tax=Leptocylin... [more]
A0A7S1G2F4_9STRA1.590e-15276.593-isopropylmalate dehydrogenase n=1 Tax=Corethron ... [more]
A0A1Z5JD77_FISSO4.690e-15275.253-isopropylmalate dehydrogenase n=2 Tax=Fistulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10465contigEcto-sp13_S_contig10465:1246..5636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score602.1
Seed ortholog evalue1.5e-169
Seed eggNOG ortholog2880.D7G282
Model size912
KEGG rclassRC00084,RC00114,RC00417,RC03036
KEGG koko:K00052,ko:K21360,ko:K22382
KEGG ReactionR00994,R04426,R08621,R08625,R08629,R08636,R08642,R08646,R10052
KEGG Pathwayko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG ModuleM00432,M00535
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons8
EggNOG free text desc.3-isopropylmalate dehydrogenase activity
EggNOG OGsCOG0473@1,KOG0786@2759
Ec32 ortholog description3-isopropylmalate dehydrogenase
Ec32 orthologEc-16_002120.1
EC1.1.1.85
Cds size903
COG Functional cat.CE
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10465.442.1prot_Ecto-sp13_S_contig10465.442.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10465 1255..5636 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.4310448-UTR-Ecto-sp13_S_contig10465:1245..12541681462532.4310448-UTR-Ecto-sp13_S_contig10465:1245..1254Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10465 1246..1254 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.4470682-CDS-Ecto-sp13_S_contig10465:1254..13861681462532.4470682-CDS-Ecto-sp13_S_contig10465:1254..1386Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 1255..1386 +
1681462532.4569361-CDS-Ecto-sp13_S_contig10465:2133..22051681462532.4569361-CDS-Ecto-sp13_S_contig10465:2133..2205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 2134..2205 +
1681462532.4652271-CDS-Ecto-sp13_S_contig10465:2505..26401681462532.4652271-CDS-Ecto-sp13_S_contig10465:2505..2640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 2506..2640 +
1681462532.4734366-CDS-Ecto-sp13_S_contig10465:3284..33951681462532.4734366-CDS-Ecto-sp13_S_contig10465:3284..3395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 3285..3395 +
1681462532.482082-CDS-Ecto-sp13_S_contig10465:4199..42651681462532.482082-CDS-Ecto-sp13_S_contig10465:4199..4265Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 4200..4265 +
1681462532.4913948-CDS-Ecto-sp13_S_contig10465:4628..47241681462532.4913948-CDS-Ecto-sp13_S_contig10465:4628..4724Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 4629..4724 +
1681462532.5041142-CDS-Ecto-sp13_S_contig10465:5079..52501681462532.5041142-CDS-Ecto-sp13_S_contig10465:5079..5250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 5080..5250 +
1681462532.5135567-CDS-Ecto-sp13_S_contig10465:5516..56361681462532.5135567-CDS-Ecto-sp13_S_contig10465:5516..5636Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10465 5517..5636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10465.442.1

>prot_Ecto-sp13_S_contig10465.442.1 ID=prot_Ecto-sp13_S_contig10465.442.1|Name=mRNA_Ecto-sp13_S_contig10465.442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
MVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGA
AIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMR
SQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPK
GIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVL
DVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIF
GDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANP
L
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mRNA from alignment at Ecto-sp13_S_contig10465:1246..5636+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10465.442.1 ID=mRNA_Ecto-sp13_S_contig10465.442.1|Name=mRNA_Ecto-sp13_S_contig10465.442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4391bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10465:1246..5636+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCTGTCCATGGTGACGGAGGCGAAGGACAGCTATGACGTCATGCTCCT
GCCTGGGGACGGCATCGGTCCCGAGATCACGGCGGCCACCGTCAACGCGC
TCGAGCCGCTGCAGTCGCTCTTCAAGCTCAACTTCAAGGAGGTGTGTTTT
TTCCGTGTGCACCCCAGAGAGGCAGGCCATGCGCTGGTACCTTTTTGTGA
ACAGATATGGGTGTTTCTGGTATTAACATCCCGGTGTGGCAGGACCATGG
TCACGAGCAGAGCAGGGAACCGATATATATATACATATATACATTTACCG
ATATATATATATACATTTATTTCTTTTTAAGTCTGGTTGCGGCTGGACTG
CCAGACAGGCGGCTGTGCTGCTCTGCTGCTGCTTTGTTGAAGCTGCTGCG
TGTTCAAACAACTGCAGTTACCCTTTCAGATACCTCAACTCCAAGCATGC
ACCTACGGTTCACGCAAGGGCGGTGGTCTCTTGGCTTGCAAAAATACACC
GTCAACGGCAGCGGCATATTCCCCGCTACGGCGGTGCGCGTATGTTTCAG
TTCGTCGTATACCTTATGACTTCCTGTTGTGCTTGCTAGTCTTGAGTCCT
CCCGCGTTTTTCTCTGGCCTCTCTTTCACGTTGAACACCACCACCCCCCT
CCCCGTTCTGCGGGATACAAGTGTCGCGGGCTGTTCTCAAAGCTGGCTTT
CAGTGTGTCTTTGTAGGCGTTTTCGTGTTGTTGTAGACTTCTATCGTAGA
CCACGTACTGAACAGGGGTCGAACGACGGCCACGAATACTCCCCCCCCGC
GGAGTATTCTAACTCCGTTCCCCCGGTATTCGCGGTAATTTTTTCTGGCC
GTGCACACGTTATCCCCTGCGGTACGCATCGTCGAAAGGCGCTGATCGGA
GGTGCCGCCATCGATGCCGAGGGATCACCGTGGCCTGATTCGACCATGGC
GTTGGCCAAGGTGAGAGATGCGTTCTGTCCCTGTAGGGTACGCTTCATGA
TGGTTTGTCTAGAAGGCGTGTCGGTGACGGGTGGTGGCGGCGGTGCTTGT
TGCTGCTGGCCCTCGCTTTGGTGCTGGTGTGGGGACGCAGTAGACAGTGC
GGCGGTGGGTCCGCGCAAAACTCACCGCGCTATCCGTGAGTTTCCGTGCC
GCAATGTTGGGGGTTCGAACGATCGCGTATTGTCGTCAGTTATTTTTTGT
CATCATTTTGATGTGTGTTTTTTGTTTTCCGCAACCAATCCAAACGAAAC
TCATCGACAGGCGTCGGACTCTATCCTGCTGGCCGCCATCGGAGGGCCCA
AGTGGGACGGCAACCCGCGGGAGCTGAGGCCTGAGACCGGGCTGCTGGCG
ATGCGCTCGCAGCTGGGGCTTTTCGCAAACCTTCGGCCTGCCAAGGTGAG
AGGGGAATGCGAACTATGATTTATTCCTATTTCGAGCTCATCCGGTCCCT
CGTCTGTGACTTCGCATGTTGGCAACATACGGAGTGCGGCAGTCCACAAA
AAGCACAAGTGTATATATGGACGTTGTAATCTTTCTACGGAAGTGCCTCA
ATCGCATAGGCCACAATAAATTTCACAACAAGGATGAATTTTAGGTGCAG
AATGAATGCATACAAGCTCGTGACTTCCCTTCTTTTGTTTGCTCCGTCCC
TCTCTTGCCTCTGCATCAACTACATAACCCACATCCCCCCGCCTCTTGCC
ATATATTCTCCCGTAGGCCCTCCCCTCCCCAACGCTCCTCCTGGAAAATG
GGTTGGTGTTTTCAGTGTTGAGATGACAATATAGCAAACGAGCCGTCTCA
CATGTACACTCCCCATCCCACATCACGCAACCTTACGAGCAAGAACGGTG
CGCCGGGTCACAAGAAATGCGTTGTCGAATGACAATCCCCCTAGTTTATT
TTGTCTTTTCCGTATAGCACGCGCGGTCAATGGTCTAGCAACTTAGGCAC
GCAAAACATGAGTACCCTCCTGTCCCCCCGTCCCCAACCGTTTTTGTTTC
CTCTTTTTCGTACCCTACACCCCGCCCCGCCTTGCCAAGGTGATGAAAGA
GCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAAGGGGTGGACA
TCATGGTGGTCAGGGAGCTCACGGGTGACGTCTACTTCGGCACGCCCAAG
GTCCGCACCTGCTGTACACACTATGCTGGACGTCTAGTAATCGCAGCTGC
CGATTGCTCTCGTTGCAGCCGTTTGCTACTGTTGAGGGTTGTCGGCATGA
TTGATTTTGTTTTCGTCGTCCCGGGAGCTCTACGGCGGCGACATATACGC
ACGGAAAATAACAACATCCAGGCATCATTTCACTTGTCATCCAAGAACCC
AACAAGTGTAAATGTAAATCGACAAATGTGTGCGTTGCCCTCGATGCGAT
GATTATGTTCTGTCCTTCGATCGGCGCCCCTGTGGTTGTTACCATCGAGT
ACGACTTGTTGCCGGAACTCTGCCGACCGCCCGACCTGGTTCAAACCCGG
CAGGGTTCAAGGCAGACTAGCGGTACCTTTATACGGCGTTGGCCTAAAAC
AAGGCCGGTCGCTCTGTGTGACGTCGGTGACAGATCGCGTGACACCGATG
GGGTCGGAGCTGTCCCTTGTTCTGAATAGTGCCGGCTGTCCGGTACAAAA
AGCCGCCCAGATCCCTTGGTGCTGCCGTGCGGCTTTATTGGAGGGGACGG
ACCACTGCTGTCGTCACGAAGAAGGACAGTGTGTGGGCTTTGCTTTCGAC
GGTGGGGATGGCGGCATCGCTGCCCAGATGATGTATCAGCGTTGCCCGGA
AAAAAACAGAACGCTGAAACGCCTCCGGTTTAGACATCGACCCAACGGAT
GAGTGTACGGTAAGACCAACACACGAACCGACGAACACAGAACCTGATGC
GTCCTCGTACTCATTTCCCCCCCGAAAATCCTCCCCCTTGTCATGTGCGT
ACAGGGGATCGACGAGCTGCCTTCGGGGGAGCGGGTAGGGTACAACAACA
TGATCTACCACGAGCACGAGGTGCGCATGCTTCCCTCGGGGGTGTGTAGG
GGCATCTTCTCGTTTTTTTCTGTTTTAGCCACACTCAGTGGCGAGCGCTG
TTGGTGCCAATGGATGGTCGTGGTGGAGCCGGGGGGAGAGGACCGACTTG
ACTCCGTTGCCTCCTTTTTTTATGAGGTCGTCCATTCCATGCTCGTTCCG
TGTATTGCGAACTACAAGAATCTCGACACAGAATCTGAGCTCTGTTGAAG
TGGCGTATTTTTGTTGTTGTTGGTCTTAGCCGGCTTGTCTGACTTCTTGG
GATTGTTGTAAACTGCAAGAATCTAGCTGTGTTCCGTTGACGTGGCGTTA
TTTTTTTTCTTCTCTTTCTTGGTTGACACGCAGGTGGAGCGTATCGCGAA
GGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCGCCTGTGTTCCGTTG
ACAAGGCTAACGTGCTCGACGTCAGTCAGGTACGGCGTGCGCGGCGCACC
AAAGTGGATGGACTGCCGAGGCTGCTGCTGCTGCTCCTGCAACTACTTCG
GCCGTTGTTGCTGTTGTTTTTTGCTTTGGAAGCATGTGGAAGGCACATCA
TGAAACTTGTCAATGAATGCTACATCAGCCGACACTCGAAGCTTAAAACC
TCTCCATCGTGTGGTTGGGTGAGGGAAGGAAGCTAGCAATGCGAAGACGA
GATCAACCTTTCCTTCGGGATGTGAACCTTACGAAGAATCTTGTGGAGAA
GCGGACACCCAAACGCTTCTTCTACTGCCGCTGCTGCTGCTGCTGCTGCT
GTCGCTGCTTTTGTTTGGGGTCGTGCTTATGTAGCTGTGGAGGGACGTGG
TGATCAAGATGTCGGAGGACTACCCGGAGGTGGAGCTGACGCACCAGTAC
GTCGACAACGCCGCCATGCAGCTCATCCGCTGGCCCAAGCAGTTCGACGT
GATGGTGACCGGCAACATCTTTGGCGACATCCTCTCCGACGAGGCCTCCA
TGCTTGTGAGACAAGCCTTCCGTACATGGAGTGGTGTTGCCGTGTTTCTG
CGTGTTTTGCTGTCCTTCGTTGTTGTTGCTGGTGATGATGATATGATCTT
ATGCGGAAACGTGCTGATGATTGGTTGGTGTGTGAAGTCTAAATAGTGCT
GATGTTCTCTGTTCTCACGATGGTTAGTTGTTATGCAACGAAGTCCCATA
AATCATGAGTGATTGATCAGGCTGACGAGTTCCCCCGCGCTGCTCGAAAC
CGCACTGGCTGTCTCGGATAGGTGGGTTCCCTCGGCATGCTCCCCTCCGC
CTCCATGGGAAACCCCGACGGCCCCGGCGTGTTCGAGCCGTGCCACGGTT
CCGCCCCGGACATCGCGGGACAGGACAAGGCCAACCCATTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10465:1246..5636+

>mRNA_Ecto-sp13_S_contig10465.442.1 ID=mRNA_Ecto-sp13_S_contig10465.442.1|Name=mRNA_Ecto-sp13_S_contig10465.442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10465:1246..5636+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGACGGAGGCGAAGGACAGCTATGACGTCATGCTCCTGCCTGGGGA
CGGCATCGGTCCCGAGATCACGGCGGCCACCGTCAACGCGCTCGAGCCGC
TGCAGTCGCTCTTCAAGCTCAACTTCAAGGAGGCGCTGATCGGAGGTGCC
GCCATCGATGCCGAGGGATCACCGTGGCCTGATTCGACCATGGCGTTGGC
CAAGGCGTCGGACTCTATCCTGCTGGCCGCCATCGGAGGGCCCAAGTGGG
ACGGCAACCCGCGGGAGCTGAGGCCTGAGACCGGGCTGCTGGCGATGCGC
TCGCAGCTGGGGCTTTTCGCAAACCTTCGGCCTGCCAAGGTGATGAAAGA
GCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAAGGGGTGGACA
TCATGGTGGTCAGGGAGCTCACGGGTGACGTCTACTTCGGCACGCCCAAG
GGGATCGACGAGCTGCCTTCGGGGGAGCGGGTAGGGTACAACAACATGAT
CTACCACGAGCACGAGGTGGAGCGTATCGCGAAGGTTGCGTACGACGTGG
CGATGAAGAGGGGGAAGCGCCTGTGTTCCGTTGACAAGGCTAACGTGCTC
GACGTCAGTCAGCTGTGGAGGGACGTGGTGATCAAGATGTCGGAGGACTA
CCCGGAGGTGGAGCTGACGCACCAGTACGTCGACAACGCCGCCATGCAGC
TCATCCGCTGGCCCAAGCAGTTCGACGTGATGGTGACCGGCAACATCTTT
GGCGACATCCTCTCCGACGAGGCCTCCATGCTTGTGGGTTCCCTCGGCAT
GCTCCCCTCCGCCTCCATGGGAAACCCCGACGGCCCCGGCGTGTTCGAGC
CGTGCCACGGTTCCGCCCCGGACATCGCGGGACAGGACAAGGCCAACCCA
TTG
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