mRNA_Ecto-sp13_S_contig1046.438.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1046.438.1
Unique NamemRNA_Ecto-sp13_S_contig1046.438.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1046.438.1 vs. uniprot
Match: D8LFA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA0_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 1.430e-63
Identity = 180/282 (63.83%), Postives = 186/282 (65.96%), Query Frame = 1
Query:  685 MFDPATMEVVSTMEKESLSEFLVSSTYLGLRKRKEEGGLDQLLKEDLESIKDIMSKEARFVEFLGDPGLNVVLSSKIGIDKFRQYLVIEFAEEGIDLLLATRSLLLKAKATKTXXXXXXXXXXXXXXXIPKEKGEGDVGGGVVEGEEDGGEKDVGRDGGAGGDGDGGQASTESGIVAPAAETPQEEGXXXXXXXXXXXXXEGEEGALEGKKGESRDMLAKTEENPASAPAPAQ----EKKTDRGGGGEGMCDIQLEGKNIYERFIKSGCGAECNLPGTVVKK 1518
            MFD ATMEVVSTMEKESLSEFLVSSTYL LRKRKEEGGLDQLL+EDLES+KDIMSKEARFVEFLGDPGLNVVLSSKIGIDKFRQYLVIEFAEEGIDLLLATRS L+KA+A KT    XXXXXXXXXXX                                                           XXXXXXXXXXXXX     ALEGK GE+RDM A TE NPA           E   D G GGEG+ DIQLEGK IYERFIK GCGAECNLPGTVV K
Sbjct:    1 MFDSATMEVVSTMEKESLSEFLVSSTYLELRKRKEEGGLDQLLQEDLESVKDIMSKEARFVEFLGDPGLNVVLSSKIGIDKFRQYLVIEFAEEGIDLLLATRSFLVKARAKKTATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEGKNGEARDMPATTEANPAXXXXXXXXXXXENIPDGGXGGEGVFDIQLEGKTIYERFIKRGCGAECNLPGTVVTK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1046.438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFA0_ECTSI1.430e-6363.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1046contigEcto-sp13_S_contig1046:6559..13921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score63.2
Seed ortholog evalue4.3e-07
Seed eggNOG ortholog215358.XP_010750177.1
Model size2630
KEGG koko:K16449
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Si ch211-117l17.6
EggNOG OGs39ZZB@33154,3C0BQ@33208,3DGUM@33213,48JXC@7711,49GR8@7742,4A7NP@7898,KOG3589@1,KOG3589@2759
Ec32 ortholog descriptionRGS domain
Ec32 orthologEc-01_004180.1
Cds size1569
COG Functional cat.T
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1046.438.1prot_Ecto-sp13_S_contig1046.438.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1046 6805..13106 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.1817412-UTR-Ecto-sp13_S_contig1046:6558..68041681462532.1817412-UTR-Ecto-sp13_S_contig1046:6558..6804Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1046 6559..6804 +
1681462532.262064-UTR-Ecto-sp13_S_contig1046:13106..139211681462532.262064-UTR-Ecto-sp13_S_contig1046:13106..13921Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1046 13107..13921 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.192478-CDS-Ecto-sp13_S_contig1046:6804..70401681462532.192478-CDS-Ecto-sp13_S_contig1046:6804..7040Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 6805..7040 +
1681462532.2026024-CDS-Ecto-sp13_S_contig1046:7389..75611681462532.2026024-CDS-Ecto-sp13_S_contig1046:7389..7561Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 7390..7561 +
1681462532.2122858-CDS-Ecto-sp13_S_contig1046:10122..103291681462532.2122858-CDS-Ecto-sp13_S_contig1046:10122..10329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 10123..10329 +
1681462532.2239568-CDS-Ecto-sp13_S_contig1046:10617..112741681462532.2239568-CDS-Ecto-sp13_S_contig1046:10617..11274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 10618..11274 +
1681462532.234516-CDS-Ecto-sp13_S_contig1046:11912..120671681462532.234516-CDS-Ecto-sp13_S_contig1046:11912..12067Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 11913..12067 +
1681462532.2471676-CDS-Ecto-sp13_S_contig1046:12964..131061681462532.2471676-CDS-Ecto-sp13_S_contig1046:12964..13106Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 12965..13106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1046.438.1

>prot_Ecto-sp13_S_contig1046.438.1 ID=prot_Ecto-sp13_S_contig1046.438.1|Name=mRNA_Ecto-sp13_S_contig1046.438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=523bp
MGNLVLTCVPVVPLEQRVDDGPGGYVKMGEGSGGEKVANVRPTTFMSEVE
GIHEPPTTLAKVLSNAVYAMAFHKHLALTNRSENYEFFQAVSHFAHETTA
NCQLTEAARKIYQLYVSEAAPLKVDLDDEICRSIKKAIDGAKVTKDMFDP
ATMEVVSTMEKESLSEFLVSSTYLGLRKRKEEGGLDQLLKEDLESIKDIM
SKEARFVEFLGDPGLNVVLSSKIGIDKFRQYLVIEFAEEGIDLLLATRSL
LLKAKATKTTPASTATTTTTTTTTIPKEKGEGDVGGGVVEGEEDGGEKDV
GRDGGAGGDGDGGQASTESGIVAPAAETPQEEGEGGGGGGRGGGGREGEE
GALEGKKGESRDMLAKTEENPASAPAPAQEKKTDRGGGGEGMCDIQLEGK
NIYERFIKSGCGAECNLPGTVVKKVSNALANEGTTMKEMVQAFQLVETEI
FKLLAYDPFPRFKRRETDGRCIVPQPSGMYTKYCMKARLHTQRSSLTQIS
EKSSLGNNSQSEISSRRFNMRE*
back to top

mRNA from alignment at Ecto-sp13_S_contig1046:6559..13921+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1046.438.1 ID=mRNA_Ecto-sp13_S_contig1046.438.1|Name=mRNA_Ecto-sp13_S_contig1046.438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7363bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1046:6559..13921+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCGGCCTACACCTTCTTTTAGTTCTATCCGCACACAGCAGCACCGCCC GGGGCGCATATGCTGCCTGCCGCACCTTCCCACGCAGCTAATGAACGACA TTGGAATGTGAATACGCCAAGAGGACTTTCATGAGTAGTGCCTCGTCAGC ATATGCGCTACAGATCTATGGCAACCACGACGACGGTGGGCAGCGAGTTG ATTATTCCGCCGCTGTTTAGTTCCTACCGTCACCACTAGTGAGCTGATGG GCAACCTAGTGCTAACATGTGTTCCGGTCGTCCCTTTAGAACAAAGGGTG GACGATGGCCCTGGCGGTTATGTGAAAATGGGAGAAGGGTCGGGTGGGGA GAAGGTGGCGAATGTCCGACCCACAACGTTCATGAGCGAGGTCGAGGGTA TACACGAGCCTCCCACCACACTGGCCAAGGTGCTCTCCAATGCTGTGTAT GCGATGGCCTTCCACAAGCACCTGGCGCTAACGTGAGTGAAGCCGACGTG ACATATGGCGGACGATGAGATGGCGATTCTCTGCTCTCGAGGTTGTAAAT TATAGCGCTGTGGCCCGATTAAATGCCGCACGTACATACATATAGACTAC AGTTACATACATAAAGAGTTGCAGTGGGGTTGTGTTCCCACCTCCCGGTC ATTCTGTTCCCTACTCTCGGTAAGCTGGTGCACCCTACCTACCTGTGCTC GCAGCACCTTCGCAACAACACTGTGTGTACCATTTTCTAACGAGTAGCTG TCTTCTAACGAGTAGCTGTCTCCTGATCGGGAATCCCCCTGCTACCCGTT TCGGCGTTGGCAACGTCTATCGGTGGTGCAGAAATCGGAGCGAGAACTAC GAGTTCTTTCAGGCCGTGTCTCACTTCGCGCACGAGACCACGGCCAACTG TCAACTCACGGAAGCCGCACGCAAGATCTACCAGCTGTACGTATCGGAGG CTGCCCCGCTGAAGGTGGATCTAGACGACGAAATCTGCCGATCCATTAAG AAGGTGCCTGTGGCAATAATTGTTTGCCGAGTTCCCCTACACTACTCCGC AAGCAAGGTGTTTCGCGAAATCGCCAAGCTCAGGTGCCAAGGGGTCCTTA CAGCATTCTAGCTGCCTCTGTCCCTGAAGTAGGGGAGGGGATTGGAGGAA CCGCAGGGATATCCTTGACCGAACAAACAACTATGTTTAATGGAGTGTCA TGGCTCGTGGTAAGGGCACATGGTCTACGCCATTGACGACACAGGCTCCT TCCGTAGGCGACATGGTGGGGGGCTGGACGACGCCAGTGTAATGATGATT GACCCCTTGCTCCAGAATCAATCACCTTTGAGGTGTGTGGAACTCTCTTA TCCGACCACACCAGTGCATGTTGTTGTTGCTTTCCGTTGTTTCTCTCTCT CTTGATTCACGCTTTCCAAGCCAACCCACAAGATCCCAAGCACACACGAT CACTGGATCGCCTGCACACTGCACACAAGGGCACATGCCTCGGCACCAAG CCCTAATCTAGAATGTCGTCACGTCATAGCATCCGACGACGCCAAATAAA TCAACATGGTCAAGCACGATCACACGTCTACCTCAAAATACGATAACAAG GGCCCCAAGGTCGAGTTAAACTTAACCTGCTGTCGGGGGCGGGCAGATTC TCTCCCTTGATTTTCGGGCGAGGAGAGAGGGTCCGAAAATGGGAGTGAGC AATACCGTGAAACAAGCAGTCTGCCCGAATATGTAGTAAAGTGGCACACG GGAGGTCCGTATTCCCATCTGTGGTCTTGTGAAAAGACAGGATCGTCCTT GACATACCTAAGGTAGGTAGATGCGACCGTTTCTTCAGGCAACCTCCACA TCCTCCACGTTGCTGCCCACTGAGTGTGGAGAGTGTGGAATGAGCAGGCT TCACGGTATACGTTCCACCCTTGTGCTGTCCCCACGGATTTTTTTCCCAT CTTCGTCGCCGTCAGCCGTTCCCCTTTTTGGGCTCATCGCTTGGTCCTTG CAATGTCCAACAATTCTACTGGCAGAATATCAGGGAGAGTTGCGTCGAGT GGGGTTCGCGCTAGTAGGATGGTGTCCACATTTTCCGCATGCGCGAAGCA GCTGACCACTACTCGCGACTGCGGTATCATCATGACAGAGCCGACCGCAA GCCCGGTTACGGTACGCGAAGACTTGAGTGAAGTTGGGAGGACTGGGACT GGCCGGAAAGGAGGAAAAAGCGTATNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTGAAGCGTTTCGAAAAGAACTCGTGATCATGCAGTGCGCTCCACCACC TAACCTCCCAAAGGACGCAATTAGATACAGGTGATGGGTCCAAAAACAAT CGCGCCCGCTCATTGGAAGAGGGTGTACAGTGTCGTGGGACGAAGGCTGA CTTGGCTTCAGTATAGAAGTGTCCCCAAATGCACTGGAGACACTTTCCAT ACTGAAGCGAAGTAGTGAAATTTTCGATACCAGGTTGTACCAGGATATGT ACAGTTTTACCGCCTAGGGGACACGCGGCTTGGGAGACATGTGTACAGCA TGTCAGAGGCCGAGGAGAGGCACACAAGTATCACATAGCAGTGTACCACA CGGCGTACCACCTCACACAAGCTTGGTAGACCAAGATTTAGGTTTCCCAG GAGCATTTCACACGGCGGAGCATAACGACGACTACGGTGCGGAAAACAGA CATTGGGGGGCTCTGTCCCATAAGTGTCCCCGTTTGGGCTTCCAGTACTA AGAGGGTTAAGCACCTATCATTATTTGTTTTGCCCTAGCCTCGTTTAATT TTTTGTCAAGAGAGCAAACCGAACCCCCACGGCGACTATATAGGTCTTAC TGTGCTTTAGGCTTCTCGACTGAGCACCTGTTGTTATGGCGAAGGTCTCA GGTTTTGAACTTTTTCTCAAGTTATAAACTGCTGCTTCACAAGTGAGGGA ACGTTCTGTAGTGAGAGCGCCTGCCCCACCCATGACCCTCGAACATGCGG GTCATCTAACCCCTTCACGCGCTTGCCTCGGTAAGTGCAACACACACGAT GCGTGTTGCGTGTTTTCGTGACGCATATCAGGAGATATAAGGACGGTACG CAACAAGCCACACAGGTAGGATATTTGTAAGGAAGGGAAGATGGAATATT TGCTTGTGCTCCGAAGGAAGGGCATTCGGTGCGTATGCGCGGCTTGTCGA TCGATGCCAGCACGACCAAAAGAGAGGCAACAGCGGACGGTGTGCCCAAC CCGAAACCGCGACACAAAACTCACCCACCCATCCTCTTCCACCACCACCT CCGTGCCGTTACAGGCCATTGATGGGGCAAAGGTGACCAAGGATATGTTC GACCCGGCTACAATGGAAGTGGTGTCGACCATGGAGAAGGAATCGCTGTC GGAGTTCCTCGTGTCGAGCACGTACCTGGGGCTCAGGAAGAGGAAAGAAG AAGGCGGGTTAGACCAACTCCTGAAAGAAGACCTAGAGAGCATCAAGGAC ATCATGTCCAAGGAGGCAAGGGTAGACACATAGATGGGTGTACTTGTAGT GGCAATGGGTCGCGGGGCGTGGCCTTGGTCTGTTTGTGTTTTCGATGTTT TTTTTTGGCACGGGAGCCAACGGCTCCCACGTCCCACACACGCCACGCCG TCCTGTCTCTCTCTAGTCGCAGAAAATCAATCACCCTAGCCGTAGCCGCA ACTTAAACCCTGACCATATTTCTAACTTGAACCATACGACAATGCGCGGA ACCGCAACACAAACGGCAACAGCGCTAACAACCGCGACCACGATGATGGC GATGCGCAGTTTGTCGAGTTTCTGGGCGACCCGGGCCTAAATGTGGTGCT GTCCTCCAAGATAGGCATCGATAAGTTCCGGCAGTACCTCGTGATCGAGT TCGCCGAGGAAGGGATCGATCTGCTTTTGGCCACTCGCAGCCTCCTCCTG AAGGCCAAGGCGACAAAAACGACACCGGCATCGACAGCGACGACGACGAC GACGACGACGACGACAATACCCAAGGAGAAGGGCGAAGGCGACGTGGGGG GTGGGGTTGTGGAGGGGGAAGAGGACGGAGGAGAAAAGGACGTGGGGCGC GACGGCGGAGCGGGCGGAGATGGGGATGGGGGCCAAGCGAGCACGGAATC GGGCATTGTTGCTCCTGCCGCAGAGACCCCACAAGAAGAAGGAGAAGGTG GAGGAGGAGGAGGAAGAGGAGGAGGAGGACGAGAAGGAGAGGAGGGAGCG CTCGAGGGGAAGAAGGGGGAGTCACGGGATATGCTAGCAAAAACAGAGGA AAACCCAGCATCAGCACCAGCACCAGCACAAGAGAAAAAAACAGACCGCG GTGGAGGTGGTGAGGGGATGTGCGACATCCAACTGGAGGGGAAAAATATC TATGAGCGTTTCATCAAGAGCGGGTGTGGGGCGGAATGCAACTTGCCAGG AACGGTCGTGAAAAAGGTGAGAAGGCGTGTGCGTCGAGGATGGGGGAGGG GCATGATGGATACTGGTTCTGGTGCTCGTGCGGGCGGTGGTATTGGCGCA GTGAGGAAAAAAGTTGAAACGTGTGCGAAAGAGCGGGGCGTGAAAACTGT TCCTTGCACCCACCCTACACCTTCCGCTCCAAGGAGGCGAGTGTCGGTCC GGGAACGCCGCCGCGGGGGTTGGTGCGCTGCCGGTCTAGGGCGAAACAGC TTGCTCTTGCTTCCACGCACAGAGTGTCCCAAACCTGCCTGATCTACGAC CAACAGACGGTGGGAACAGACGAGGGGGGATCTTGCTGATGTCGATGTAC TCTGGAATCGTCTGCCAGACGTCCCTCTCAGTGCGGGTGGTCTCTGGGGC TGCTGATAGTAGAATCTTCAGGAGGGCTAACGGGATGTCTGGGAAGAAGG GGGGACGGCATGGGGAGGGGGCCGGTCCTCCCGAGTTGGACGTGCGTGAC GCGCAAAGAGCGGCCACGAATGTGTTGGCCACATGCACGAGCTTCTCTCT GTCCACGTGCACGGAAGTTTGTTTTACCCAAAGATCGCTCCCCGCCGTGC ACCGCCTGTCTCTCCATCCCGTTGTACCTCTGTCCGTGTGTACGTCTCTT TCAGGTTTCGAATGCGTTGGCCAACGAAGGGACCACCATGAAGGAGATGG TCCAGGCTTTCCAGTTGGTGGAGACCGAGATATTTAAGCTCCTTGCGTAC GACCCTTTTCCACGCTTCAAAAGGCGAGAGACAGATGGTAGATGTATAGT ACCGCAACCGTCGCTGACTGTCGGCTGCAATGGTATATTGACATCGTCAT TTTCGTCATTTAGCATCTCTGCAAGAGCCACGAACACAAATGTGCCGCGC CACACGGTGCGCACTTGGGTCCGGCTCACGCACGAAGTTACTACATGGTC TTCCACCTCACCCGTGCGTGGGCCCGGCCCTCACCCGGGACCCGGAACAC AGCACACGACGTTCGAACGTACCATCTGCCAGTCGTTCAGAGGGTACATA CGCGGTGTCACACAGGCCCTTGTCATAACCAGCGTTTCTTGTGGCATCAT CCGGCTCAATGAAAGCCTCGCGGCGTTCGGCGCTGTGTGTAGCACCTGCC TGGTCTGTTGCCTGGCTGGTGCTGGTGCTGGTGCTGCTGGTGCTGCTGTG ATGGTTGTTGCAGTTGTTGTTGCTGCTGTAGCTTTTGCTGCTGTAGCTTT TGCCGCTGTTGCTTTTGGTGCTGTTGCTTTTGGCGTTGGGGGATACTTTG TTTGCGTCGGGTTCCTCCCGTCGACGTCCTACTTGGCTTCTCCTATTGAC GCCACGCGCAAATGTTTCATGCAAGCACGGCTCACCCGTTCGTGGACCAG ACAAAAGGAGGTGTGGTGTGTGCTCCACCAGACATCGTTGTGGTACTGAC ACACGATCTGTCCAACTATGCACACACGTGCCGTAGCGTGCACGGGTCAA ATGTCGTGCTCCAAAATGCTAGGAAAACATGTATTTTGATTGAATGCATG TACGAGATTCATGAATGTACTAGAAAAAACAATCTGGAAGGGTGCACTAC GTTTTCCCGCAGTTTTAAACAGTCGCACACCGCACACTGATTACAATATA AAAAAAGCTTGCCTTTGTTCGTGTGCTTGCTCTGATACTCCGTCCACTCT CCCCAGGTCTGGCATGTACACCAAGTACTGCATGAAAGCAAGGTTGCATA CCCAGCGGTCTTCCCTCACACAGATCTCAGAAAAAAGCTCATTGGGGAAT AATAGCCAGAGTGAAATATCGTCGAGGAGATTCAACATGCGAGAGTGATA TATCGTCGAGGAGGGCAAAACCTTCAAAGTTTGTCGTTGTTCGGTAGTTG ATCGGACGACCACTTTTGTAGCCACCAAACAAGAATTTGGCAGGCACATA CAGTCAGCGAGTCCTAGGCAAGGAACAACAGTCGCTTCTGTTTGCTTGTT CGGGGATATGCAAACCTCCGTTAGTCCATGTTGCTTGGGGTCGCGAATGA ATGCGTTAGCGAGGGGCCGAGTGCAGCGGTACGTATGCAGACGGGGGGAG AATCAATCGAACTGCTGGTTGGATGATGTAGGAACCTCGGGGGTGGGTTT TTCACTTGAAATCGTAGTGCAATTCACTCCCATCGACCGGAAGCTCTTCT ACTTCGACTTGCTTGGGTTTTCCAAAAGGGGGGGGCGGGGTATCAAACGC AGAAAAATAGAATCTCGTAGAGGGCAATACGTGGTACCGTCGTTTCTCCA CGAGGAAATGTGCCTGACGGGGGGCTTATTTCTGTGTAGGGTAGGGTGTT TTTTCTTCTGTACCTTTCCCCAAGTTCTTGCTTGACAGTTCCACCAACAG ACAGGACGGCGTCTGTCGCCGCTATCTGTACTCACTCGTGCAAATTGTGG AACTAACCCATCCCCTGAAAGCTGCCTATGTGCGTGCATCCAAAACCCAC AGAGGAGGTGCAGAGATTTGTGGTGCTGTGCTGCAGCAGCTACCTCGCCG GGGGGTTGATGGCGTGTTGCACGATTTGCCCGATAAACAGCTGGAATCTT GTCCGCGAATAGAATTCGTCCGATGTGATATGTTTGCCAGAACGAACACC AGCAACAAATACA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1046:6559..13921+

>mRNA_Ecto-sp13_S_contig1046.438.1 ID=mRNA_Ecto-sp13_S_contig1046.438.1|Name=mRNA_Ecto-sp13_S_contig1046.438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1046:6559..13921+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCAACCTAGTGCTAACATGTGTTCCGGTCGTCCCTTTAGAACAAAG
GGTGGACGATGGCCCTGGCGGTTATGTGAAAATGGGAGAAGGGTCGGGTG
GGGAGAAGGTGGCGAATGTCCGACCCACAACGTTCATGAGCGAGGTCGAG
GGTATACACGAGCCTCCCACCACACTGGCCAAGGTGCTCTCCAATGCTGT
GTATGCGATGGCCTTCCACAAGCACCTGGCGCTAACAAATCGGAGCGAGA
ACTACGAGTTCTTTCAGGCCGTGTCTCACTTCGCGCACGAGACCACGGCC
AACTGTCAACTCACGGAAGCCGCACGCAAGATCTACCAGCTGTACGTATC
GGAGGCTGCCCCGCTGAAGGTGGATCTAGACGACGAAATCTGCCGATCCA
TTAAGAAGGCCATTGATGGGGCAAAGGTGACCAAGGATATGTTCGACCCG
GCTACAATGGAAGTGGTGTCGACCATGGAGAAGGAATCGCTGTCGGAGTT
CCTCGTGTCGAGCACGTACCTGGGGCTCAGGAAGAGGAAAGAAGAAGGCG
GGTTAGACCAACTCCTGAAAGAAGACCTAGAGAGCATCAAGGACATCATG
TCCAAGGAGGCAAGGTTTGTCGAGTTTCTGGGCGACCCGGGCCTAAATGT
GGTGCTGTCCTCCAAGATAGGCATCGATAAGTTCCGGCAGTACCTCGTGA
TCGAGTTCGCCGAGGAAGGGATCGATCTGCTTTTGGCCACTCGCAGCCTC
CTCCTGAAGGCCAAGGCGACAAAAACGACACCGGCATCGACAGCGACGAC
GACGACGACGACGACGACGACAATACCCAAGGAGAAGGGCGAAGGCGACG
TGGGGGGTGGGGTTGTGGAGGGGGAAGAGGACGGAGGAGAAAAGGACGTG
GGGCGCGACGGCGGAGCGGGCGGAGATGGGGATGGGGGCCAAGCGAGCAC
GGAATCGGGCATTGTTGCTCCTGCCGCAGAGACCCCACAAGAAGAAGGAG
AAGGTGGAGGAGGAGGAGGAAGAGGAGGAGGAGGACGAGAAGGAGAGGAG
GGAGCGCTCGAGGGGAAGAAGGGGGAGTCACGGGATATGCTAGCAAAAAC
AGAGGAAAACCCAGCATCAGCACCAGCACCAGCACAAGAGAAAAAAACAG
ACCGCGGTGGAGGTGGTGAGGGGATGTGCGACATCCAACTGGAGGGGAAA
AATATCTATGAGCGTTTCATCAAGAGCGGGTGTGGGGCGGAATGCAACTT
GCCAGGAACGGTCGTGAAAAAGGTTTCGAATGCGTTGGCCAACGAAGGGA
CCACCATGAAGGAGATGGTCCAGGCTTTCCAGTTGGTGGAGACCGAGATA
TTTAAGCTCCTTGCGTACGACCCTTTTCCACGCTTCAAAAGGCGAGAGAC
AGATGGTAGATGTATAGTACCGCAACCGTCTGGCATGTACACCAAGTACT
GCATGAAAGCAAGGTTGCATACCCAGCGGTCTTCCCTCACACAGATCTCA
GAAAAAAGCTCATTGGGGAATAATAGCCAGAGTGAAATATCGTCGAGGAG
ATTCAACATGCGAGAGTGA
back to top