mRNA_Ecto-sp13_S_contig1046.436.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1046.436.1
Unique NamemRNA_Ecto-sp13_S_contig1046.436.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1046.436.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE)

HSP 1 Score: 1060 bits (2742), Expect = 0.000e+0
Identity = 655/795 (82.39%), Postives = 672/795 (84.53%), Query Frame = 1 
Query:    1 HTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCRRHGRSTSNGRISRFCSVSSNSRELGTGVAMNGEREGSGGEGERVARQEQRHQGQEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAGRQQEQLPAAVLAHLCDSLLRMLPCCLPESFGQAGRVGHDGGGDEPQEDPAGEDNDARLCAARXXXXXXXXXXXXXXXXXXXDTKVDSLSGTGRDAVVIGDDASSGGG-------------QEKQEAFLYPTEETGDGQARPARSDSFTPSADGEGHDEPTSSGGGGDSRSDDIEFDGPRVAALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSAGVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVVFRLLDVRWPQSSPSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFTGGSGE----PSQQRRR----------------------------------SRPPRPGLPADGDVHGAVGGKARGGVHSGSAAGPILVVDDLLEWSGDGDEGPGGXXGVGWDGTALALDFLRREGGDLLVRYFVADGEVQRASLEDHMLSSTNDTAAAXAAVPSSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPTASTGSRAHQQASTPRSMGSGGTRRPPVAAPRPPAAGGLGPQHQQREPANLVASAEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLTRMAPLIGVPGEA 2232
            HTTAPQLFRAAVAV+SSNAEAAVPLGVPTLLAFFEPHVCCRRH  STSNGR  RF SVSSNSR+LGTG  +NG REGSGGEGERVARQEQRHQGQEDAXXXXXXXXXXXXXXXXXXXXXXX VAEEAGVPGDGLMSRLALESLGLLVEGLAG QQEQ+PAAVLAHLCDSLLRML  CL ESFG+AGRVGHD GG EPQEDPA EDN AR CAARXXXXXXXXXXXXXXX    DTKVDSLSGTGRDAVV+G DASSGGG             QEKQEA LYPTEE GDG+A+PARSDS T SADGEGHDEPTS GGGGD RSDD+EFDGPR AALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLS GVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAV FRLLDVRWP+SSPSAS XXXXXXXXXXXXX                 GAF GGS E    P  + R                                   SRPPRPGLPADGDVH AVGGKARGGVHSGSAAGP+LVVDDLLEWSGDGDEGPG     GWDGT LAL+FLRREGG++LVRYF ADGEVQRASLEDHM SS +DTAAA +AVPSSSFAPPSPSQHRGGFS ESPSRHTVTSSSFSPTASTGSRAHQQASTPRSMGSGGTRRPP AAPRPPAAGGLGPQHQQREPANLVAS EAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELL RM PLIGVPGEA
Sbjct:  513 HTTAPQLFRAAVAVISSNAEAAVPLGVPTLLAFFEPHVCCRRHRHSTSNGRSGRFYSVSSNSRQLGTGDTVNGGREGSGGEGERVARQEQRHQGQEDAXXXXXXXXXXXXXXXXXXXXXXXXVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEQIPAAVLAHLCDSLLRMLRRCLSESFGRAGRVGHDSGGGEPQEDPADEDNGARHCAARXXXXXXXXXXXXXXX----DTKVDSLSGTGRDAVVVGVDASSGGGGDLGPSARGGGGRQEKQEARLYPTEEAGDGEAQPARSDSLTLSADGEGHDEPTSGGGGGDGRSDDVEFDGPRAAALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSEGVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVAFRLLDVRWPRSSPSASGXXXXXXXXXXXXXETIGGGTSRSSAGD---GAFAGGSDEVSLMPWPEHRSFELEAVVVVPNDXXXXXXXXXXXXXXXXXXXXXXSRPPRPGLPADGDVHRAVGGKARGGVHSGSAAGPMLVVDDLLEWSGDGDEGPGSGGAAGWDGTTLALEFLRREGGNILVRYFEADGEVQRASLEDHMWSSADDTAAA-SAVPSSSFAPPSPSQHRGGFSVESPSRHTVTSSSFSPTASTGSRAHQQASTPRSMGSGGTRRPPGAAPRPPAAGGLGPQHQQREPANLVASTEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLRRMTPLIGVPGEA 1299
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BLAST of mRNA_Ecto-sp13_S_contig1046.436.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 3.640e-176
Identity = 407/746 (54.56%), Postives = 419/746 (56.17%), Query Frame = 1 
Query:    1 HTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCRRHGRSTSNGRISRFCSVSSNSRELGTGVAMNGEREGSGGEGERVARQEQRHQGQEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAGRQQEQLPAAVLAHLCDSLLRMLPCCLPESFGQAGRVGHDGGGDEPQEDPAGEDNDARLCAARXXXXXXXXXXXXXXXXXXXDTKVDSLSGTGRDAVVIGDDASSGGGQEKQEAFLYPTEETGDGQARPARSDSFTPSADGEGHDEPTSSGGGGDSRSDDIEFDGPRVAALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSAGVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVVFRLLDVRWPQSSPSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFTGGSGEPSQQRRRSRPPRPGLPADGDVHGAVGGKARGGVHSGSAAGPILVVDDLLEWSGDGDEGPGGXXGVGWDGTALALDFLRREGGDLLVRYFVADGEVQRASLEDHMLSSTNDTAAAXAAVP--SSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPTASTGSRAHQQASTPRSMGSGGTRRPPVAAPRPPAAGGLGPQHQQREPANLVASAEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLTRMAPLIGVPGEA 2232
            HTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCRRH  STSNG  SRFCSVSSNSR+LGTGVA+NG REGSG EGE +ARQEQRHQ QEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAG QQE+LPAAVLAH+CDSLLRML  CLPESFG+AG                                                                                                                                                                                                                        G                                                                              LPADGDVHGAVGGKARGGVHSGSAAGP+LVVDDLLEWSGDGD+GPGG    GWDGTALAL+FLRREGG+LLVRYFVADGEVQRASLEDHM SS +D    X      SSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPTASTGSRAHQQASTPRS+GSGG RRP  AAPR PAAGGLGPQHQQREP NLVASAEAEVRHLT AVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLTRMAPLIGVPGEA
Sbjct: 1858 HTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCRRHRHSTSNGSSSRFCSVSSNSRQLGTGVAVNGGREGSGDEGESLARQEQRHQVQEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEKLPAAVLAHVCDSLLRMLRRCLPESFGRAGXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXG------------------------------------------------------------------------------LPADGDVHGAVGGKARGGVHSGSAAGPMLVVDDLLEWSGDGDDGPGGGGAAGWDGTALALEFLRREGGNLLVRYFVADGEVQRASLEDHMWSSADDXXXXXXXXXXXSSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPTASTGSRAHQQASTPRSVGSGGARRPLGAAPRLPAAGGLGPQHQQREPVNLVASAEAEVRHLTSAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLTRMAPLIGVPGEA 2336
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1046.436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ76_9PHAE0.000e+082.39DUF1981 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LFA1_ECTSI3.640e-17654.56BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1046contigEcto-sp13_S_contig1046:3..4180 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score457.6
Seed ortholog evalue1e-125
Seed eggNOG ortholog2880.D8LFA1
Model size3119
KEGG koko:K18442
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.regulation of ARF protein signal transduction
EggNOG OGsCOG5307@1,KOG0929@2759
Cds size2025
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1046.436.1prot_Ecto-sp13_S_contig1046.436.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1046 213..3296 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.0528123-UTR-Ecto-sp13_S_contig1046:2..2121681462532.0528123-UTR-Ecto-sp13_S_contig1046:2..212Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1046 3..212 +
1681462532.102679-UTR-Ecto-sp13_S_contig1046:3296..41801681462532.102679-UTR-Ecto-sp13_S_contig1046:3296..4180Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1046 3297..4180 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462532.0623212-CDS-Ecto-sp13_S_contig1046:212..7771681462532.0623212-CDS-Ecto-sp13_S_contig1046:212..777Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 213..777 +
1681462532.0702453-CDS-Ecto-sp13_S_contig1046:816..11801681462532.0702453-CDS-Ecto-sp13_S_contig1046:816..1180Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 817..1180 +
1681462532.0781178-CDS-Ecto-sp13_S_contig1046:1772..20341681462532.0781178-CDS-Ecto-sp13_S_contig1046:1772..2034Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 1773..2034 +
1681462532.0861163-CDS-Ecto-sp13_S_contig1046:2142..24381681462532.0861163-CDS-Ecto-sp13_S_contig1046:2142..2438Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 2143..2438 +
1681462532.0942726-CDS-Ecto-sp13_S_contig1046:2758..32961681462532.0942726-CDS-Ecto-sp13_S_contig1046:2758..3296Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1046 2759..3296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1046.436.1

>prot_Ecto-sp13_S_contig1046.436.1 ID=prot_Ecto-sp13_S_contig1046.436.1|Name=mRNA_Ecto-sp13_S_contig1046.436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=675bp
MNGEREGSGGEGERVARQEQRHQGQEDAGGGGEEAVRWWEGEMQAAAAAG
AAVAEEAGVPGDGLMSRLALESLGLLVEGLAGRQQEQLPAAVLAHLCDSL
LRMLPCCLPESFGQAGRVGHDGGGDEPQEDPAGEDNDARLCAARLLFDDD
SGGGGGGGGGGGGDTKVDSLSGTGRDAVVIGDDASSGGGQEKQEAFLYPT
EETGDGQARPARSDSFTPSADGEGHDEPTSSGGGGDSRSDDIEFDGPRVA
ALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSAGVRYARDFQAQH
ALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVVFRLLDVRWP
QSSPSASGGGSGGGGHDVAAVVVPEATGGGTSRSSAGDGAFTGGSGEPSQ
QRRRSRPPRPGLPADGDVHGAVGGKARGGVHSGSAAGPILVVDDLLEWSG
DGDEGPGGGGGVGWDGTALALDFLRREGGDLLVRYFVADGEVQRASLEDH
MLSSTNDTAAAAAAVPSSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPT
ASTGSRAHQQASTPRSMGSGGTRRPPVAAPRPPAAGGLGPQHQQREPANL
VASAEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRS
LEVRAVVRELLTRMAPLIGVPGEA*
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mRNA from alignment at Ecto-sp13_S_contig1046:3..4180+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1046.436.1 ID=mRNA_Ecto-sp13_S_contig1046.436.1|Name=mRNA_Ecto-sp13_S_contig1046.436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4178bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1046:3..4180+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACACGACCGCACCGCAGCTGTTCCGCGCGGCCGTCGCCGTCGTCTCGAG
CAACGCCGAGGCCGCGGTGCCGCTGGGAGTTCCGACGCTTTTGGCGTTTT
TCGAGCCCCACGTTTGTTGCCGGCGACACGGGCGTAGCACCAGTAACGGC
AGGATTAGCCGCTTCTGTAGCGTCAGCAGTAACAGCCGTGAGCTGGGCAC
GGGTGTGGCTATGAATGGCGAGCGAGAGGGATCGGGTGGTGAAGGAGAGC
GTGTGGCACGGCAAGAGCAAAGGCATCAGGGTCAGGAGGACGCCGGAGGT
GGCGGCGAGGAGGCTGTACGGTGGTGGGAAGGGGAGATGCAGGCAGCGGC
AGCAGCGGGGGCGGCGGTGGCGGAGGAAGCGGGGGTCCCCGGGGACGGCT
TGATGTCCCGCCTGGCCCTCGAGTCTTTGGGGCTCCTGGTGGAAGGCCTG
GCCGGGCGTCAGCAGGAGCAACTCCCCGCGGCGGTCCTCGCGCACCTCTG
CGACAGCCTCCTCCGCATGCTGCCTTGTTGCCTTCCCGAGTCCTTCGGCC
AGGCGGGACGCGTCGGGCACGACGGCGGCGGAGACGAGCCGCAAGAAGAC
CCCGCGGGTGAGGATAACGACGCCCGCCTTTGCGCCGCGCGGTTGTTGTT
CGACGACGACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAG
ATACCAAGGTCGACTCCTTGTCCGGTACCGGGCGAGACGCCGTTGTCATA
GGTGACGACGCCTCCAGCGGGGGTGGTGGCGATCTCGGGCCATCAGCACG
AGGTGGCGGTGGAGGGCAGGAGAAGCAGGAGGCGTTTTTATATCCCACCG
AGGAAACGGGAGACGGGCAGGCGCGGCCGGCACGCAGCGACTCATTTACT
CCGTCTGCAGATGGTGAAGGTCATGATGAACCGACCAGTAGTGGTGGCGG
TGGCGACAGTCGTTCTGACGATATCGAGTTTGACGGCCCGCGGGTGGCGG
CTCTGCTCGCGGCGGCGCTGCGTCTCCAGCGCCTCCTGTACGGCTTGGCA
AGGTTACACCTCGGCGGACTGGGGGAAGACCAGGCTCGCGCTCTGTTGGG
GGGCCTTTCGGCAGGGGTGCGGTACGCGAGGGACTTTCAGGCGCAGCACG
CTCTGAGAACTTCGTTGTTTGCTGCAGGGTGGGTTTTCGTGTGGAATCAA
TCGGTGTTTGTGTGATTTGATCGTCGACTGGGTCTTGGCGCTCAACTCAC
GGCAGCTTCGGGGGGGAAGAAAGTGCCCGCGATCTTCCAAAACCACGCGG
AAAACCGACACCCGTCTCCACCCTCGCTCTGATCTGTTTTTTTCTGTTCT
TCGTCTTCGCTGTGCTTTGTGGCGCGTGAACGCTCGTTGTTGTTGGTTAA
TTTGTGCTTTGGCGGCACTTTTTGTAAATTTTTGCAGCATGTGATCAATG
CCTCGAGGGGATGCTTGTTTCGAACCCCTGTGTTGGACTCTCGCGTGCTT
ATTCCTGCACACGGGTAGACCGCGGGCATCTGGAACGGGTCACCGTTGTT
TTTGCACTGCAGCCGTTACGTCGGTCGCGAGAGAGGCCCTATCTGCAGCG
ACCGTTCCCGTGTCGACGGGTGAAGCAGCAGAAGCCTGGCGTGTTCGTTG
TTTGCTCGCGTTCGTTCGCGCTCGATCGATTGCCGCTGCTCTGCGGCGTG
TTCACCAAACTACCGTAACCTCCGCCCAAAACGCGAAATCTGTCGTCGCC
GACAACCGGACTCGACGCAGGGTTCTCGTTCCTAGATCACCCCCGGGTTT
GCAAGAGCTGCCGCACCTCCTGGAGCAGGAGAGCGAAGGCCTCTGGTTCA
TCTTCGCGGTCGTGTTCCGATTACTAGACGTACGATGGCCGCAATCCTCC
CCGTCAGCCTCTGGTGGAGGTAGTGGTGGTGGTGGTCACGATGTTGCTGC
GGTGGTGGTGCCTGAAGCTACAGGCGGGGGCACGAGCCGTAGCAGCGCCG
GAGACGGCGCCTTTACCGGCGGCAGCGGCGAAGTCTCTCTCATGCCCTGG
CCGGAGCGCCGGTCGTTCGAGCTGGAAGCGGTGGTGGTACCTAACGACAC
CTCAAGCGGAGGAGGAGGAGGAGGAGGAGGAGGACGGCAGCCCAGCCAGC
AGCGCCGTCGATCGCGCCCTCCGCGACCAGGTTTACCGGCCGACGGCGAC
GTACACGGGGCGGTGGGAGGGAAGGCGAGGGGTGGTGTTCACAGCGGGAG
CGCGGCGGGGCCGATACTGGTTGTGGACGACCTGTTGGAGTGGAGTGGCG
ACGGGGACGAAGGCCCGGGTGGCGGGGGGGGCGTAGGATGGGACGGGACG
GCCCTCGCCCTCGATTTTTTGCGACGCGAGGGGGGTGACCTCTTGGTTCG
GTACTTCGTAGCCGACGGGGAAGTACAGCGAGCTAGGTGAGAGAATATGA
AATACAACCACAATTAAAACTCATCCGAAAATGTTTTGGTAGGTGACCGT
GGAGTGTCAACACGTCGAACGCAAGCGTTTAGGCCGATCGGGATCAAGGG
TTTGGATAGACTCTGCAGCCGCTGCGGCCGCTACTGCTACTACTCGTGCT
GCGGGTGTGTGCGATAGTGCGTTCTTCGCAGCGTTTCCTTCCTGCTTGCC
CAACCGCCATATCCACGATTCCCTTAAACTACCATCAGCAACATGACTGT
TACCACCCCCCGCCTACCTATCCACTCCCTCCCGTGCCATGTGCGCTTGA
ACTCAGCCTGGAAGATCACATGTTGAGTAGCACGAATGACACGGCTGCGG
CGGCGGCAGCAGTACCTTCCTCCTCCTTCGCTCCCCCCTCCCCGTCGCAG
CATCGCGGCGGGTTCTCCGCAGAGAGTCCGAGCAGGCACACCGTCACCTC
GTCCTCGTTCTCCCCCACGGCGAGTACCGGGAGCCGAGCGCATCAGCAGG
CGAGCACGCCCAGAAGCATGGGCAGCGGCGGCACGCGACGCCCCCCCGTT
GCCGCCCCTAGGCCTCCCGCCGCCGGTGGGCTTGGGCCTCAGCACCAGCA
GCGAGAGCCGGCTAACCTGGTTGCGAGCGCGGAGGCCGAGGTCAGGCATC
TCACCCCGGCGGTTCTGCTGCTGCTGCGAGGCCTCCTCTTGTTGCAGCCC
GCGGAGGCTTTCGATAGGGAGGCTGGCTGGCTGTGCCCTCGTCTCGCGGA
TTTGGTTGTCGTCAGGAGTCTGGAGGTTCGGGCGGTCGTGCGGGAGCTGC
TGACAAGGATGGCACCACTGATAGGGGTCCCGGGAGAGGCGTGATTGGTG
TAAACGCCGGCCGCGGCGTTCGTGGCGGCGGCGGTGGTTGGTGTTGTAGT
TTTTATTCCATGGACTAGCCTTTTATATCGCGAGGAGGAGCGGTCTCGTC
GTGGCTTTGGTCCTTGTCCCTATGTGTCTTAGCCTATATGTTATTCCAAC
TTTTTACATCCTTATAAATAGATGGCAGGTGTAGCGGGTGAAGAAGCCTT
ACCTTAATCTTGTGACAAATAATAGTGACAAAGTAAGAAAACTGTTTTAC
CTTCTCAAGCTACTGCTGTGGACCTCGCCCGAGCGGCACGCGGGGGCGCC
GCTATTTGCGTTGGCCTGAGTCGAACCAACAACGCGGGACAAACATTTGC
TGTGCTCTCAAGTGCACACAGGGCACAACATGACGGGCATCGAAAATTTT
CGGCAACAGGAGTAGGCCGCACCTGTCGTCGGCACACGTGTCGGTTGTAG
TGTGATTTCCCGTAGCATTAGAGTGCTGTGTATATCGAGCCAACACAAAG
GTTGACGTGAATTGTGGTAGAACATCACTGGCACGCCAACACATGTGTCA
GGGATTGTGGTTGAGAACAACGTACTCAACAAAGGCTTCTGAAACTTGTC
GAAAGGCCTCGGTGGGGCTCAAGAAGCGTGCTGGTCTCGTCGACTCGTGG
TATTTCTATATTGGTGTTTCTCTCTTTTCGTTTTTTGTCGGATGTGAGCG
TTGGGCACCGCGGCAGTGGCTCTTGCCGCCTATTCGTGGTGATGGGCCCA
ACTTTCGTTTCCTTCCAAGAAGATATTTGGACCTGGATCGCGTGAAATAT
GCATGAACACCAGCAAGATACTTGTATCTTGGGTCAGAGAACGTCGCAGG
GAAATGAGCGTCTCTGGGAAAGTAGAGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1046:3..4180+

>mRNA_Ecto-sp13_S_contig1046.436.1 ID=mRNA_Ecto-sp13_S_contig1046.436.1|Name=mRNA_Ecto-sp13_S_contig1046.436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1046:3..4180+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAATGGCGAGCGAGAGGGATCGGGTGGTGAAGGAGAGCGTGTGGCACG
GCAAGAGCAAAGGCATCAGGGTCAGGAGGACGCCGGAGGTGGCGGCGAGG
AGGCTGTACGGTGGTGGGAAGGGGAGATGCAGGCAGCGGCAGCAGCGGGG
GCGGCGGTGGCGGAGGAAGCGGGGGTCCCCGGGGACGGCTTGATGTCCCG
CCTGGCCCTCGAGTCTTTGGGGCTCCTGGTGGAAGGCCTGGCCGGGCGTC
AGCAGGAGCAACTCCCCGCGGCGGTCCTCGCGCACCTCTGCGACAGCCTC
CTCCGCATGCTGCCTTGTTGCCTTCCCGAGTCCTTCGGCCAGGCGGGACG
CGTCGGGCACGACGGCGGCGGAGACGAGCCGCAAGAAGACCCCGCGGGTG
AGGATAACGACGCCCGCCTTTGCGCCGCGCGGTTGTTGTTCGACGACGAC
AGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAGATACCAAGGT
CGACTCCTTGTCCGGTACCGGGCGAGACGCCGTTGTCATAGGTGACGACG
CCTCCAGCGGGGGTGGGCAGGAGAAGCAGGAGGCGTTTTTATATCCCACC
GAGGAAACGGGAGACGGGCAGGCGCGGCCGGCACGCAGCGACTCATTTAC
TCCGTCTGCAGATGGTGAAGGTCATGATGAACCGACCAGTAGTGGTGGCG
GTGGCGACAGTCGTTCTGACGATATCGAGTTTGACGGCCCGCGGGTGGCG
GCTCTGCTCGCGGCGGCGCTGCGTCTCCAGCGCCTCCTGTACGGCTTGGC
AAGGTTACACCTCGGCGGACTGGGGGAAGACCAGGCTCGCGCTCTGTTGG
GGGGCCTTTCGGCAGGGGTGCGGTACGCGAGGGACTTTCAGGCGCAGCAC
GCTCTGAGAACTTCGTTGTTTGCTGCAGGGGTTCTCGTTCCTAGATCACC
CCCGGGTTTGCAAGAGCTGCCGCACCTCCTGGAGCAGGAGAGCGAAGGCC
TCTGGTTCATCTTCGCGGTCGTGTTCCGATTACTAGACGTACGATGGCCG
CAATCCTCCCCGTCAGCCTCTGGTGGAGGTAGTGGTGGTGGTGGTCACGA
TGTTGCTGCGGTGGTGGTGCCTGAAGCTACAGGCGGGGGCACGAGCCGTA
GCAGCGCCGGAGACGGCGCCTTTACCGGCGGCAGCGGCGAACCCAGCCAG
CAGCGCCGTCGATCGCGCCCTCCGCGACCAGGTTTACCGGCCGACGGCGA
CGTACACGGGGCGGTGGGAGGGAAGGCGAGGGGTGGTGTTCACAGCGGGA
GCGCGGCGGGGCCGATACTGGTTGTGGACGACCTGTTGGAGTGGAGTGGC
GACGGGGACGAAGGCCCGGGTGGCGGGGGGGGCGTAGGATGGGACGGGAC
GGCCCTCGCCCTCGATTTTTTGCGACGCGAGGGGGGTGACCTCTTGGTTC
GGTACTTCGTAGCCGACGGGGAAGTACAGCGAGCTAGCCTGGAAGATCAC
ATGTTGAGTAGCACGAATGACACGGCTGCGGCGGCGGCAGCAGTACCTTC
CTCCTCCTTCGCTCCCCCCTCCCCGTCGCAGCATCGCGGCGGGTTCTCCG
CAGAGAGTCCGAGCAGGCACACCGTCACCTCGTCCTCGTTCTCCCCCACG
GCGAGTACCGGGAGCCGAGCGCATCAGCAGGCGAGCACGCCCAGAAGCAT
GGGCAGCGGCGGCACGCGACGCCCCCCCGTTGCCGCCCCTAGGCCTCCCG
CCGCCGGTGGGCTTGGGCCTCAGCACCAGCAGCGAGAGCCGGCTAACCTG
GTTGCGAGCGCGGAGGCCGAGGTCAGGCATCTCACCCCGGCGGTTCTGCT
GCTGCTGCGAGGCCTCCTCTTGTTGCAGCCCGCGGAGGCTTTCGATAGGG
AGGCTGGCTGGCTGTGCCCTCGTCTCGCGGATTTGGTTGTCGTCAGGAGT
CTGGAGGTTCGGGCGGTCGTGCGGGAGCTGCTGACAAGGATGGCACCACT
GATAGGGGTCCCGGGAGAGGCGTGA
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