mRNA_Ecto-sp13_S_contig10441.420.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 367 bits (942), Expect = 3.000e-116 Identity = 194/208 (93.27%), Postives = 195/208 (93.75%), Query Frame = 2
Query: 2 AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ 625
AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKA RRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAW+SNLIFQ
Sbjct: 281 AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAKKVNKAAGGGGVARRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWSSNLIFQ 488
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 360 bits (923), Expect = 2.180e-113 Identity = 189/208 (90.87%), Postives = 193/208 (92.79%), Query Frame = 2
Query: 2 AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ 625
AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLA SE+TKA RRGMLSKNAFDHCIRGLVPGRRLSQGQK+RFSGLLSA F+AFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQL+REGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ
Sbjct: 284 AMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLATSESTKAKKVNKAAGGGGVARRGMLSKNAFDHCIRGLVPGRRLSQGQKQRFSGLLSAAFYAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ 491
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK) HSP 1 Score: 152 bits (384), Expect = 7.590e-43 Identity = 83/188 (44.15%), Postives = 113/188 (60.11%), Query Frame = 2
Query: 62 LTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ 625
L +T DV+ V LA TGL +DP V LLA +E G+LSK FD C+R L+P + L+ +K FS LLSA+F+A+D DGS+ D + GF LLC+GNKS KLA AF LLDEDGD +L+R G+WRFLR+ LS+LM S + +++V+ +D+ A WT+ IF+
Sbjct: 2 LALTAADVARVQRLAARTGLRGRDPRAVCGGLLAFAEE------------------GLLSKKQFDRCVRRLIPAQSLTAEEKAEFSALLSALFYAYDRDGSSQVDVLEFMGGFALLCAGNKSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFE 171
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA) HSP 1 Score: 125 bits (315), Expect = 7.340e-32 Identity = 75/200 (37.50%), Postives = 106/200 (53.00%), Query Frame = 2
Query: 23 FQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIF 622
F F + + A L+I E D V+EL TGLA +P + ALL A++ G LSK AFD C++ L G +L ++ R + LLS++++AFD DA +LA+GF +LC GNKS KL A+ LL D D LTR G+WR++RS L++LM S A + ++ VD A W S +F
Sbjct: 41 FYFQISESSAATPLSIEENDARAVMELVDRTGLARAEPQRICGALLRAAD-----------------AEGALSKRAFDQCMQVLALGAQLKAQERTRCAVLLSSIYYAFDRGNDGRVDALELATGFSILCGGNKSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVF 222
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A6U1MRH8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRH8_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.740e-29 Identity = 76/201 (37.81%), Postives = 110/201 (54.73%), Query Frame = 2
Query: 56 VVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVP----GRRLSQGQ-------KERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQ 625
V L ++E DV V +LA TG + DP V L+ S++ G+LSK FD + LVP G L +G+ + F LLS++F+A+D D ++ D + +SGF LLC G+KS KL+ AF LLDED D +L+R G+WR+LRS L++LMG S A S ++V +DS A + +I+Q
Sbjct: 22 VALALSELDVHLVTQLAHRTGFSQMDPQKVCPVLMEYSDD------------------GLLSKREFDRFLSELVPDLFGGGPLMEGEPPMTDEERSAFGSLLSSIFYAYDRDSTSQVDVLEFSSGFSLLCHGSKSTKLSYAFDLLDEDEDQKLSRRGLWRYLRSFLTVLMGASLANSGLSGEELVWAIDSGAVHAAAVIYQ 204
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.840e-27 Identity = 67/190 (35.26%), Postives = 110/190 (57.89%), Query Frame = 2
Query: 59 VLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAXXXXXXXXXXXXXRRGMLSKNAFDHCIRGLVP--GRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIF 622
+++IT++ V+ + +L Q +G ++ +V LL +N+ A G+LSK+ +D+ +R +V G +SQ + R S LLS++FFAF D S+ A +LASGF +LC G KS KL AF L+D+D D +L+R G+W++LRS L++LM S A ++ + +DS + W + +F
Sbjct: 23 LVSITQDRVTRLRQLIQESGFDRRNVHEVTQVLL---QNSNANT-------------GLLSKDQYDNAMRNIVSNGGGSMSQESQRRLSDLLSSIFFAFVRDKSSRVVALELASGFTVLCGGRKSDKLEFAFDLIDDDKDGRLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVF 196
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A7S3Y3W7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W7_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 1.260e-19 Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 2
Query: 263 IRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIF 622
+R LVP L+ +++RFS LL+ VF FD + D + +GF L C+G+KSVKLA AF LLDE LTR GVWRF RS+LS+L + ++ VD A WT+ F
Sbjct: 2 LRRLVPVEALAARERDRFSTLLATVFLVFDREARMEVDVLEFIAGFVLFCAGSKSVKLAYAFELLDEQSLGYLTRRGVWRFFRSILSMLAALCSSLLDVPTEELQARVDDGAVWTTARAF 121
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A024G6V4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6V4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.300e-9 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 2
Query: 230 GMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFS 541
G+L + F + L+ + +K+ FS L+ VF +F DA +LA+GF LL G+KS KLA+AF D DG L + +WRFLRS+L +L+ S
Sbjct: 373 GLLEEKTFFRIVEELLSRTTSNPPRKDGFSDLILDVFKSFTTTKLQHVDAIELAAGFSLLTWGSKSDKLAAAFYFFDVDGKGYLNSQQLWRFLRSILIMLLFLS 476
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: A0A418DM36_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DM36_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.900e-8 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 2
Query: 308 ERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIA 598
++F+ + +F F + + DA +LA+GF L C+G+KS KLA+ F D D LTR+ +WRFLRS L I++G + S + V++++D+ A
Sbjct: 320 DKFTASMRMLFRHFQ---TRTVDAFELAAGFALFCAGSKSDKLAAGFHFFDTDDTGTLTRDQLWRFLRSSLVIMVGLVPPTLSSSSS-VLDEIDAAA 412
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Match: F0W7I8_9STRA (Uncharacterized protein AlNc14C30G2794 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7I8_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.630e-7 Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 2
Query: 230 GMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILM 532
G+L + F + L+ + +K+ FS L+ F + DA +LA+GF L G+KS KLA+AF D DG L + +WRFLRS+L +L+
Sbjct: 373 GLLDEKTFLQVVEELLSQTTSNPPRKDGFSDLILDAFKPYVTSKLQHVDAIELAAGFSLFTWGSKSDKLAAAFHYFDIDGKGYLNSQQLWRFLRSILIMLL 473 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10441.420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10441.420.1 >prot_Ecto-sp13_S_contig10441.420.1 ID=prot_Ecto-sp13_S_contig10441.420.1|Name=mRNA_Ecto-sp13_S_contig10441.420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAAback to top mRNA from alignment at Ecto-sp13_S_contig10441:2141..4855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10441.420.1 ID=mRNA_Ecto-sp13_S_contig10441.420.1|Name=mRNA_Ecto-sp13_S_contig10441.420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10441:2141..4855+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10441:2141..4855+ >mRNA_Ecto-sp13_S_contig10441.420.1 ID=mRNA_Ecto-sp13_S_contig10441.420.1|Name=mRNA_Ecto-sp13_S_contig10441.420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10441:2141..4855+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |