mRNA_Ecto-sp13_S_contig10431.412.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10431.412.1
Unique NamemRNA_Ecto-sp13_S_contig10431.412.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: D8LT48_ECTSI (UPF0020 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT48_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 1.520e-181
Identity = 287/337 (85.16%), Postives = 290/337 (86.05%), Query Frame = 1
Query:    1 LRQHVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGGRGSAFAXXXXXXXXXXXXXXXXXXXXXQAGERTKQMTRRGELTSGNVWYAA 1011
            L +HVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILV                             GG      TDIDVRVLKGKKGR+VFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEAR VKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGGRGSAFAXXXXXXXXXXXXXXX      +  ERTKQMTRRGELTSGNVW  A
Sbjct:  169 LPEHVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVACA------------------------HFGGVCVG--TDIDVRVLKGKKGRSVFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEARTVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGGRGSAFAXXXXXXXXXXXXXXXS-----RQRERTKQMTRRGELTSGNVWAGA 474          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A6H5JUH8_9PHAE (UPF0020 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH8_9PHAE)

HSP 1 Score: 514 bits (1325), Expect = 1.110e-177
Identity = 295/379 (77.84%), Postives = 297/379 (78.36%), Query Frame = 1
Query:    1 LRQHVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGGRGSAFAXXXXXXXXXXXXXXXXXXXXXQ--------------AG----------------------------ERTKQMTRRGELTSGNVWYAA 1011
            L +HVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILV                             GG      TDIDVRVLKGKKGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEARIVKP+ERFDHMPHTQHYPVEDVLVDLLEVAAQTL LGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSG RGSAFA XXXXXXXXXXXXXXXXXXXX               AG                            ERTKQMTRRGELTSGNVWYAA
Sbjct:  169 LPEHVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVACA------------------------HFGGVCVG--TDIDVRVLKGKKGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVMELYDCIVTDPPYGIRAGARKSGREGEARIVKPDERFDHMPHTQHYPVEDVLVDLLEVAAQTLALGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGERGSAFAAXXXXXXXXXXXXXXXXXXXXAGEVRSRTPPLAPGAAGTAVXXXXXXXXXXXXXXXADGLTSVLPRERTKQMTRRGELTSGNVWYAA 521          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A836CPF8_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF8_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.800e-81
Identity = 150/280 (53.57%), Postives = 177/280 (63.21%), Query Frame = 1
Query:   13 VYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGK-KGRNVFTNFDKYGLPRPELVRSDNALYGRHFR---VMELYDCIVTDPPYGIRAGARKSG-REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAACR 837
            VYFGREV Q NR LV A  L  R YLGPTSMDNEL+LVMANM   G G L  DPFVGTGSILV                    + G V            TDID R L G+  G N+F+NFD++GLP P++VRSDNAL+  HF+   V  L+D IVTDPPYGIRAGAR++G R      V+PE+R DH+P T+ Y VEDVLVDLL+VAA+ L  G RLCYL+  T+E   +  LP HPCL L  HS+QGLT+  CRRL+TM K   YDP +R  Y A  R
Sbjct:  170 VYFGREVGQSNRRLVGARSLSTRAYLGPTSMDNELSLVMANMVHAGPGTLILDPFVGTGSILVA-----------------AAQFGAV---------CVGTDIDPRPLHGRGDGANIFSNFDQFGLPHPDVVRSDNALFAGHFKGGIVDGLFDGIVTDPPYGIRAGARRTGSRRANVTPVRPEQRADHVPMTRPYAVEDVLVDLLDVAARALRRGRRLCYLMPGTYETCTRASLPGHPCLRLVAHSVQGLTKTTCRRLVTMVKVAEYDPAQRAAYEAHSR 423          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A7S4QDS7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QDS7_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.670e-70
Identity = 136/282 (48.23%), Postives = 175/282 (62.06%), Query Frame = 1
Query:   13 VYFGREVA-----QGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVR--YRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKG-RNVFTNFDKYGLPRPELVRSDNALYGRHFRVME-LYDCIVTDPPYGIRAGARKSGREGE-ARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIA 828
            VYFGR +      +G R  +  + LK R YLGPTSMD+EL+L+M N+A V     CFDPFVGTGSIL+    R A                                TDID+RVL+G+    N+++NF +Y LPRP+LVRSDNA+Y RH+R  + LYD IVTDPPYGIRAGARKSG   E  R V+ E R+DH+  T+ Y V DV+ DLL+VAA+TLV+GGRLCY++ S  +FD Q DLPRH CL+L H   Q L   L RR++ M K   Y+  +R +Y++
Sbjct:  215 VYFGRILGGARNWRGGR--MEKYSLKNRVYLGPTSMDSELSLIMTNLAQVKNTSFCFDPFVGTGSILLTCALRGA----------------------------YCLGTDIDIRVLRGRSSDENIYSNFRQYDLPRPDLVRSDNAIYSRHYRGHKPLYDAIVTDPPYGIRAGARKSGSRLENPRPVEEEHRYDHIAQTKPYAVSDVMSDLLDVAARTLVMGGRLCYVIPSMTDFDEQVDLPRHECLKLVHVCYQPLQMELGRRIVAMEKIADYNESKRSDYMS 466          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A7S2KVC6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVC6_9STRA)

HSP 1 Score: 233 bits (595), Expect = 9.390e-69
Identity = 136/277 (49.10%), Postives = 168/277 (60.65%), Query Frame = 1
Query:   16 YFGREVAQGNR----DLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGK-KGRNVFTNFDKYGLPRPELVRSDNALYGRHFRV-MELYDCIVTDPPYGIRAGARKSG-REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYI 825
            YFGR +  G        +  + LKKR YLGPTSMD+EL+L+M N+A V KG   FDPFVGTGSIL+                            L G      TDID+RVL+G+ +  N+ +NF +YGLP PELVRSDNA+Y RHFR  + L+D IVTDPPYGIRAGARKSG R+ E R V  E R DH+  T+ Y V DV+ DLL VAA TL +GGRLCY++ S  +F+   DLPRH CL L     Q L   L RR +TM K   Y+  +R+EY+
Sbjct:  240 YFGRVLGVGRNWRGSGRLEQYSLKKRAYLGPTSMDSELSLIMTNLAQVKKGSFAFDPFVGTGSILLT-------------------------TALRGAYAFG-TDIDLRVLRGRSQTENIVSNFSQYGLPPPELVRSDNAIYHRHFRQHLPLFDAIVTDPPYGIRAGARKSGSRKDEVRPVLDEHRHDHIAQTRPYVVSDVMSDLLNVAAMTLRMGGRLCYVIPSMQDFNESEDLPRHDCLRLVSVCYQPLQTELGRRTVTMEKVREYEEDKRDEYV 490          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A7S3PUT2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUT2_9STRA)

HSP 1 Score: 232 bits (591), Expect = 3.340e-68
Identity = 132/282 (46.81%), Postives = 170/282 (60.28%), Query Frame = 1
Query:   13 VYFGREVAQGNRDL-----VAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVR--YRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGK-KGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVME-LYDCIVTDPPYGIRAGARKSGRE-GEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIA 828
            VYFGR +  G RD      +  F+LK+R YLGPTSMD EL+L+M N+  V KG  CFDPFVGTGSIL+    R A                                TDID+RVL+G+    N+ TNF ++ L RPELVRSDN++Y RH+     +YD I+TDPPYGIRAGARKSG +  + R VK E+R DH+  T+ Y V DV+ DLL+V+A+ LV+GGRL Y++ S  +FD++ DLP H C  L H   Q L   L RR +TM K   YD  +R EY++
Sbjct:  231 VYFGR-ILGGRRDWRGQNRLGKFNLKRRSYLGPTSMDAELSLIMTNLGRVQKGSFCFDPFVGTGSILLTCGLRGA----------------------------YCSGTDIDIRVLRGRGTDENILTNFQQFNLGRPELVRSDNSIYERHYLTKRPMYDAIITDPPYGIRAGARKSGSKLDKPRPVKEEDRHDHIAQTKVYAVSDVMADLLDVSARNLVMGGRLVYVIPSMTDFDVETDLPNHACFRLVHVCYQPLQSNLGRRTVTMEKVGEYDFSKRSEYLS 483          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: B7FYI3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYI3_PHATC)

HSP 1 Score: 230 bits (587), Expect = 3.440e-67
Identity = 136/279 (48.75%), Postives = 173/279 (62.01%), Query Frame = 1
Query:   16 YFGREVA----QGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGK-KGRNVFTNFDKYGLPRPELVRSDNALYGRHFRV--MELYDCIVTDPPYGIRAGARKSG-REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIA 828
            YFGR +       +R  V+ F LK R YLGPTSMD EL+ VMAN+A VG+  +  DPFVGTGSILV                     VG              TDID+RVL+GK +  NV +NF ++ LPRPEL+RSDNA+Y RHFR   + +Y+ IVTDPPYGIRAGARKSG R  + R V    R +H+  T+ Y V DV+VDLL+VAA+TLVLGGRL Y++ S  +F+ + DLPRH CL+  H   Q L+  L RR++ M K   YDP +R+ Y+A
Sbjct:  280 YFGRALGGTRQTKHRGDVSRFSLKSRAYLGPTSMDAELSFVMANLAGVGQSSVVLDPFVGTGSILVS------------CAARGAYCVG--------------TDIDIRVLRGKGENSNVVSNFRQFDLPRPELIRSDNAIYQRHFRRTHIPMYNAIVTDPPYGIRAGARKSGSRLDQPRPVLESNRHNHIAQTKPYVVSDVMVDLLDVAARTLVLGGRLVYVIPSFRDFEPESDLPRHECLKTVHICYQPLSAELGRRVVVMQKQSEYDPTQRKTYLA 532          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A7S0UFW3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFW3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.110e-64
Identity = 124/264 (46.97%), Postives = 156/264 (59.09%), Query Frame = 1
Query:   70 LKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKG-RNVFTNFDKYGLPRPELVRSDNALYGRHFR-----------VMELYDCIVTDPPYGIRAGARKSGRE-GEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEY 822
            LK RPYLGPTSMD EL+ VM ++  V KG +  DPFVGTGSIL+                     +G              TDID+RV++GK   + ++ NF+ YGLPRPE+VRSDNALY RH+R              LYD IV DPPYGIRAGAR++G +  + R V  E R DH+  T+ Y V DV+ DLL+VAA TL +GGRL Y++ S   FD +RDLPRH CLEL H   Q  +  L RR++ M K   YD  ++EEY
Sbjct:   10 LKSRPYLGPTSMDAELSFVMTSLGKVTKGTIVLDPFVGTGSILLS------------CAMRGAYCIG--------------TDIDIRVIRGKGADQTIWKNFEHYGLPRPEIVRSDNALYHRHYRHHPNGAGGNNIAPPLYDAIVCDPPYGIRAGARQTGSKLNKPRPVLEENRHDHIAQTKAYAVSDVMSDLLDVAASTLKVGGRLVYIIPSFQNFDEERDLPRHECLELIHTCYQPFSLELGRRIVAMKKIADYDVSKKEEY 247          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: A0A448ZQV7_9STRA (UPF0020 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQV7_9STRA)

HSP 1 Score: 220 bits (561), Expect = 6.700e-63
Identity = 130/295 (44.07%), Postives = 171/295 (57.97%), Query Frame = 1
Query:   16 YFGREV------AQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKG-RNVFTNFDKYGLPRPELVRSDNALYGRHFR----------------VMELYDCIVTDPPYGIRAGARKSGREGE-ARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIA 828
            YFGR +      + G+R  +  + LK RPYLGPTSMD EL+ VM ++  V    + +DPFVGTGSIL+                     +G              +DID+RVL+GK G R ++ NFD YGLPRPE++R+DNALY RHFR                   LYD I+ DPPYGIRAGAR++G   E  R +  E R DH+  T+ Y V DV+ DLL+VAA+TLV+GGRL Y++ S  +FD +RDLPRH CLEL H   Q  +  L RR++ M K   YDP +R+ Y++
Sbjct:  314 YFGRVLGGRTRSSDGSRG-IDHYSLKTRPYLGPTSMDAELSFVMTSLGRVTSSTIVYDPFVGTGSILLS------------CAMRGAYCIG--------------SDIDIRVLRGKGGDRTIWKNFDYYGLPRPEILRTDNALYHRHFRHHTPGDSVEDEDESVVAPTLYDAILCDPPYGIRAGARQTGSRLENPRPILEENRHDHIAQTKPYVVSDVMSDLLDVAARTLVVGGRLVYVIPSFRDFDEERDLPRHDCLELVHTCYQPFSTELGRRIVAMEKVSDYDPRKRQTYLS 581          
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Match: B8C0I8_THAPS (UPF0020 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0I8_THAPS)

HSP 1 Score: 223 bits (567), Expect = 1.290e-61
Identity = 135/284 (47.54%), Postives = 168/284 (59.15%), Query Frame = 1
Query:   16 YFGREVAQGNRDL---------VAAFDLKKRPYLGPTSMDNELALVMANMALVGKGKLCFDPFVGTGSILVRYRDAPPXXXXXXXXXXXXXRVGRVRPRLGGXXXXXXTDIDVRVLKGKKGR-NVFTNFDKYGLPRPELVRSDNALYGRHFRV-MELYDCIVTDPPYGIRAGARKSG-REGEARIVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYDPLRREEYIAA 831
            YFGR +  GN  L         +  + LKKR YLGPTSMD+EL+L+M N+ALV KG   FDPFVGTGSIL+                            L G      TDID+RVL+G+  + N+ +NF +YGLP PELVRSDNA+Y RH+R  + L+D IVTDPPYGIRAGA++SG R  E   V  E R DH+  T+ Y V DV+ DLL VAA TL +GGRL Y++ S  +FD   DLP+H CL L     Q L   L RR +TM K   YD  +R+ Y+ A
Sbjct: 1040 YFGRVL--GNASLGRNWRGSNRLEQYSLKKRLYLGPTSMDSELSLIMTNLALVKKGSFAFDPFVGTGSILLT-------------------------TALRGAFAFG-TDIDLRVLRGRSPKENIASNFAQYGLPPPELVRSDNAIYHRHYRDNLPLFDAIVTDPPYGIRAGAKQSGSRREEVTPVLEEHRHDHIAQTRPYCVSDVMADLLNVAAMTLKIGGRLVYVIPSMLDFDETEDLPQHECLRLVSICYQPLQTELGRRTVTMEKVEEYDENKRDAYLGA 1295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10431.412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT48_ECTSI1.520e-18185.16UPF0020 domain-containing protein (Fragment) n=1 T... [more]
A0A6H5JUH8_9PHAE1.110e-17777.84UPF0020 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CPF8_9STRA2.800e-8153.57S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S4QDS7_9STRA2.670e-7048.23Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2KVC6_9STRA9.390e-6949.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PUT2_9STRA3.340e-6846.81Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B7FYI3_PHATC3.440e-6748.75Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0UFW3_9STRA1.110e-6446.97Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A448ZQV7_9STRA6.700e-6344.07UPF0020 domain-containing protein n=1 Tax=Pseudo-n... [more]
B8C0I8_THAPS1.290e-6147.54UPF0020 domain-containing protein n=1 Tax=Thalassi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10431contigEcto-sp13_S_contig10431:240..4687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score531.2
Seed ortholog evalue3.6e-148
Seed eggNOG ortholog2880.D8LT48
Preferred nameTRMT11
Model size1011
KEGG koko:K02995,ko:K15430
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0001510,GO:0002940,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0043528,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1902494,GO:1990234
Exons7
EggNOG free text desc.tRNA (guanine-N2-)-methyltransferase activity
EggNOG OGsCOG1041@1,KOG2671@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-08_004210.1
EC2.1.1.214
Cds size1011
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10431.412.1prot_Ecto-sp13_S_contig10431.412.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10431 240..4687 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462530.5181665-CDS-Ecto-sp13_S_contig10431:239..4401681462530.5181665-CDS-Ecto-sp13_S_contig10431:239..440Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 240..440 +
1681462530.5300815-CDS-Ecto-sp13_S_contig10431:1477..16491681462530.5300815-CDS-Ecto-sp13_S_contig10431:1477..1649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 1478..1649 +
1681462530.5399935-CDS-Ecto-sp13_S_contig10431:2173..22911681462530.5399935-CDS-Ecto-sp13_S_contig10431:2173..2291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 2174..2291 +
1681462530.5496156-CDS-Ecto-sp13_S_contig10431:2889..30131681462530.5496156-CDS-Ecto-sp13_S_contig10431:2889..3013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 2890..3013 +
1681462530.562214-CDS-Ecto-sp13_S_contig10431:3677..38481681462530.562214-CDS-Ecto-sp13_S_contig10431:3677..3848Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 3678..3848 +
1681462530.580304-CDS-Ecto-sp13_S_contig10431:4336..45011681462530.580304-CDS-Ecto-sp13_S_contig10431:4336..4501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 4337..4501 +
1681462530.5914547-CDS-Ecto-sp13_S_contig10431:4627..46871681462530.5914547-CDS-Ecto-sp13_S_contig10431:4627..4687Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10431 4628..4687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10431.412.1

>prot_Ecto-sp13_S_contig10431.412.1 ID=prot_Ecto-sp13_S_contig10431.412.1|Name=mRNA_Ecto-sp13_S_contig10431.412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=337bp
LRQHVYFGREVAQGNRDLVAAFDLKKRPYLGPTSMDNELALVMANMALVG
KGKLCFDPFVGTGSILVRYRDAPPPPPPPPPPPPPPRRVGRVRPRLGGGG
GGGGTDIDVRVLKGKKGRNVFTNFDKYGLPRPELVRSDNALYGRHFRVME
LYDCIVTDPPYGIRAGARKSGREGEARIVKPEERFDHMPHTQHYPVEDVL
VDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLT
QLLCRRLITMTKTCRYDPLRREEYIAACRLHQTSGGRGSAFAAATAAAAA
EEDGGFRQLEQQQQAGERTKQMTRRGELTSGNVWYAA
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mRNA from alignment at Ecto-sp13_S_contig10431:240..4687+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10431.412.1 ID=mRNA_Ecto-sp13_S_contig10431.412.1|Name=mRNA_Ecto-sp13_S_contig10431.412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4448bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10431:240..4687+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTACGACAGCACGTGTACTTCGGAAGGGAAGTCGCCCAGGGCAACCGCGA CCTGGTGGCCGCGTTCGACCTGAAGAAGAGGCCCTACCTAGGACCGACCT CCATGGACAACGAGCTTGCGCTGGTGATGGCCAACATGGCTCTCGTCGGG AAGGGGAAGCTTTGCTTCGACCCCTTCGTGGGGACCGGCTCGATATTGGT GGTGAGGGGCTCCGTCATCGCGGGGGGGGGGAGGGAGTCTTGGCCTTCTG CGTTGGACCATTGGTCTTGCAGACTGTTTTTTGCCGGAATGGGCTCTCCG ATGTCGAATGAAGCGTACCGGTTCAAGCAGGATCGATAGGAGGTACTGCT GTACACACAGGTCGTACCATGTATAGTTACAGCAGAAGTACACGGTTCTA GGAGTGTGTACGCGTACGTGGTGAGTGTAGTAGTACACACACACGATGGA TATGTTGATGTGGAAGTAATTTTTCACTGCTGCTGCTGGCAGCTGCTAGC TGCTGTGTGTAGCTCGGTGATGTGGTCTCTGTTGTGTATATGGACTTTTC ATCATGGTAGAAAGTCACACAGGCTACCCCTGGTGTATGCTGCAGCAGTT GTTTTTTTGTGTGTTGTACTCACTTACCAACCCCTGAATAAAGATTTCAG ATTAGGTGTATATCAAAATTGACCAACCATCATCAATCAGCGGGCACACA ACAACAACATATCATCTACGGTCAGATTGAAATGTCTGGGTGTTTCTAGG AAAAACGTGAACCCAACGTCGATGACATCATACGTCGAGCAGGGATATTT GGCCTATCAGAAATTTCCTTTCAAAAGCAATTGGTCAATCAGAAAACTGC GGCCACCTTTCTCTCTCTCTCTCTCTGGGGGTGACGTATGTGCTGAGGCC GGGGTGGGGCGGCTTGTTTGTTTTGAAGCCAGGCCTGGTTCTGGGCCTGT TCCTTGGTTGCAGGGAGCGGTAGTTGGAGAGGGGGCGGGGGGAAAGGGCG TGGTCTCTTGGAACCGTTGGTGGTGGGACTTTTTTTGCTTGCTCCTTGCA GCGGGGATGGCCGGAGGCATCGGGGCATGGCCTATTCCTCTGTGTGTGTG CGTGGTAGCGCCTGGAGAAGTTTCGCGTGGGAAAGCGCGCGCGGTTTGCT CTCGACGCCCATGTTCTCGGTGCGCTATGACGATGGCGATGGCGATGTTA AGATATGCTTTCCAAGCGTGACTACGGGCCTTGGACAGCGTTATCGTGAT GCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGCG GGTCGGTCGCGTGCGCCCCCGTTTGGGGGGGGGGGGGGGGGGGGGGGGAA CGGACATCGACGTCCGTGTCCTGAAGGGAAAGAAAGGGAGGAACGTCTTC ACAAACTTCGGTGAGCCGGCAGACACACGCGCGAGCCATGATGACGGGGA CGACGCATATGGCACGCACGAAAATGATGGGGGCTTGATTCGCTGGGCTT GCGTGTCGGCAAGTTCAGACCACGCGCAGCAGCAACGGTAGTAGCAAGCG GGGGCAGCTCAACACCCGCTCGCAAACGGTGTTGGAGAGATGAACTTACG AACACAGACACAAGTTTGTTGCTCCCTCGAAATTGAGACTTCTGCTCAAT AGTATGAGAAGTTGCCCGCTCGCACAGGCTTGGCTGGTCGCTGGAAATCC CGGAGCGCACGGGTATCTGACTTGCAGTTGGCAGACTCTGTTGGGTGCCG GCCGCGTTTGCGTTTGTCTCTATTCGGACTAGGAGGAAACAATGTCCTGT CTCGCATAGAGTGCGGAATCACTGGTCACCTACGGCATAAAACAAATGAC TGCGACCTCTCTCCCCCCGCCCCCCCCCGCCCCCTCCCTTCTTTTTCACG ATGCCTGCTCCGCGTGGCGGCCGCGCCTACGCAGACAAGTATGGGCTGCC ACGTCCGGAGCTTGTCCGGTCGGACAACGCGCTCTATGGGAGACACTTTC GCGTCATGGAGCTCTACGACTGCATCGTCACGGACCCGCCGTACGGGATC AGGTACGTGTCTGTTCCGCTGTGTGCGAGACCACACGCGTGTGTTCGGTG CGGTATCTATCTCACCCCCTCGCCCTACGTTCGAGCTAACCTTTATCCCT CCCCATTTCCCCCCTTGCGTTACCTCCCAGCTACTGTAGATTGACGGTAC CGGACCTTTTTTTTCTGTGTTTCTGGATCGGGCGAGAGGTTGTCTGCCTC AAACCGTGCGCCCGTGATCATCGTACCCGGAAATAAGAAATACGAGGGAC ACGCGTTTTTCGTTTTTTCAAATTACATGATGCTCCCGTTAATCAATCGA CACCCACTCTTTCGTATTGCCGGTCCAGTGTCGAACATATCACCACAACC CCCCAGAGAACATTTTTGGCACCCCGCTGCCCGATCACCTCGGCTGGCTG GGGGCTGCGTGGCTTCTGCGAAGACGACTTCGGGGAGCGCGCGGGGGTGG GGCAGTATGTCAAGCAAGCCTAATAATCTCGCCAAATGATTAAAAAACCG AATACCGAACACCGACCGTGTGGATGAAGTTTATTTGAAGCACCGCATGA CGGAACGGCGTGGCATGATATGACATACGAGTGTGTTTTTTCGACCCCAG GGCTGGTGCGCGCAAGTCTGGGCGGGAGGGGGAGGCTCGCATCGTCAAGC CGGAAGAGAGGTTCGACCACATGCCGCACACGCAGCACTACCCCGTGGAA GATGTCTTGGTCGATCTCCTAGAGGTGAGCGAGGTCTATAGGGCCTACGA AGAGCTCACTTTCCCCCTCAGCAGCAGCTGTATGTTTGTGTTCAAGCACA CTTTTGCGCCCACGGCATGAAGCCGTTCGATCTTGGCCTCTGTACATGAG GGACCAGCGTTGTTTTTTGCAAGCGCTTGTCAACTCCTGGTCTTTTGCCT CTGGGTTGAGTTGGCTTTCCCCTTCGCCCAGGCTGTATTTTTTTGTGCTT CCCTCTGATTAGCCCATACATTCAACAAAAGAGGGGCAAAACCATGTGCC TGCCATGTCCACTCACGTGTTGGCGCACGGAATCTGCTCTTGCTTGGAAG TCCATTGCAAAGAACGGTAGTAAAAAAAGTGACGCTATGCATACATCCCC GAAAAGGCGGGAGAAGTTGACACCAACCTTAACACAGCGTCTCTATACTC GGGACGAGAAGAGTGGTATGCTGTGTCACGTTAGAACCATTCCACTTCTT CCCCGATGGCCATCGCGTGTACCACTTCTGTGTCTTTTTTTTATTATTTT GTTGTGGGCGAGACATGAATCTCCCTGCCTGCTCAGTTTTTTGTGGCCCC CTCCTATGTACACAGCGCAGTGTACGGCTTCTTCCGTCCTTGAACTTTTT TCATTGGTCTTCGCTCTCTCTCTTTCCCCTTTCGGCAGGTGGCAGCCCAG ACCCTCGTGCTCGGCGGGCGGCTGTGCTACCTCTTGGCGTCGACGTGGGA GTTCGACCTGCAGAGGGACCTGCCTCGGCACCCCTGCCTGGAGCTGTCCC ACCACAGCATGCAGGGCTTGACGCAGCTACTCTGCCGGCGTCTGATCACG ATGACCAAGGTGAGCGAAGGATGGATGGAGAGCGGCATCCTCATGTAAGA TGTTGCTCGGGTTGTAGAAATATGAAACGAAGAGAAATGGAGTAGGAGAC ACGCCAAAAAAGGGTCGTTGCCGCCGTAGCCGCCGTTGTCGGTGGTGGTG GTGGTGGCCGTGGTCGATTGCCTCAAACGACGACATCAAGTTGGGTCATA CAAAAGGCGATCTGTATTTCGTCAAATGGGGACAAGCACGACCTTCTACG ACTGTGTGACCCGACGTTTTATTCAACCTAGTCCACCACCGATTGCGTGT TTATGAGTGTACCACGCGTTTGTTTGCTGACCACCTCTACGTCTTCACCG GGCTCACTCCGCTCCACACCGGGTTTTCGTTTATGGGGGGAGATTGACTC TCGGTTACTTTCCATTGACTCTCGGAAACTTTCCTTTTTCGACCCCTACC CTCCTGCTTACGGTACTTTTCATCGATGATCGACGACGAAATGCCAGACC TGCCGGTACGACCCCCTCCGACGAGAAGAGTACATTGCGGCGTGCCGCCT TCACCAGACGAGCGGCGGGCGAGGGAGCGCTTTCGCGGCGGCGACGGCGG CGGCTGCAGCGGAGGAAGATGGTGGCTTCCGGCAGCTGGAACAGCAACAG CAAGCAGGGGAGGTTCACTCTCGTACACCACCGCCAGCTCCCGGTGCTGC TGGTACTGCTGTAGGAGCTAGCGGCGGCGTTGCCGCCGCTGCTGGTGCTG CTGCTGCCGATGGTCTGACGTCCGTGCTCCCCAGGGAGAGAACCAAGCAG ATGACGAGGCGCGGGGAGCTCACCTCGGGCAACGTCTGGTACGCCGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10431:240..4687+

>mRNA_Ecto-sp13_S_contig10431.412.1 ID=mRNA_Ecto-sp13_S_contig10431.412.1|Name=mRNA_Ecto-sp13_S_contig10431.412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1011bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10431:240..4687+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTACGACAGCACGTGTACTTCGGAAGGGAAGTCGCCCAGGGCAACCGCGA
CCTGGTGGCCGCGTTCGACCTGAAGAAGAGGCCCTACCTAGGACCGACCT
CCATGGACAACGAGCTTGCGCTGGTGATGGCCAACATGGCTCTCGTCGGG
AAGGGGAAGCTTTGCTTCGACCCCTTCGTGGGGACCGGCTCGATATTGGT
GCGTTATCGTGATGCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCGGCGGGTCGGTCGCGTGCGCCCCCGTTTGGGGGGGGGGGGG
GGGGGGGGGGGAACGGACATCGACGTCCGTGTCCTGAAGGGAAAGAAAGG
GAGGAACGTCTTCACAAACTTCGACAAGTATGGGCTGCCACGTCCGGAGC
TTGTCCGGTCGGACAACGCGCTCTATGGGAGACACTTTCGCGTCATGGAG
CTCTACGACTGCATCGTCACGGACCCGCCGTACGGGATCAGGGCTGGTGC
GCGCAAGTCTGGGCGGGAGGGGGAGGCTCGCATCGTCAAGCCGGAAGAGA
GGTTCGACCACATGCCGCACACGCAGCACTACCCCGTGGAAGATGTCTTG
GTCGATCTCCTAGAGGTGGCAGCCCAGACCCTCGTGCTCGGCGGGCGGCT
GTGCTACCTCTTGGCGTCGACGTGGGAGTTCGACCTGCAGAGGGACCTGC
CTCGGCACCCCTGCCTGGAGCTGTCCCACCACAGCATGCAGGGCTTGACG
CAGCTACTCTGCCGGCGTCTGATCACGATGACCAAGACCTGCCGGTACGA
CCCCCTCCGACGAGAAGAGTACATTGCGGCGTGCCGCCTTCACCAGACGA
GCGGCGGGCGAGGGAGCGCTTTCGCGGCGGCGACGGCGGCGGCTGCAGCG
GAGGAAGATGGTGGCTTCCGGCAGCTGGAACAGCAACAGCAAGCAGGGGA
GAGAACCAAGCAGATGACGAGGCGCGGGGAGCTCACCTCGGGCAACGTCT
GGTACGCCGCC
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