mRNA_Ecto-sp13_S_contig10422.405.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A6H5KPF6_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF6_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.320e-87 Identity = 147/156 (94.23%), Postives = 151/156 (96.79%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAALDKAMREKEVANKEGKPGEDAESGSEGNDWTRVVRRGEGQEDAGLNSKPLSVVAGVSKVGGAAK 468
LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAALDK+MREKEVANKEGK GEDAESGSEGNDWTRVVRRG GQ D LNS+P+SVVAGVS+VGGAAK
Sbjct: 521 LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAALDKSMREKEVANKEGKAGEDAESGSEGNDWTRVVRRGVGQADTVLNSRPVSVVAGVSEVGGAAK 676
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A836C8M6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M6_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.340e-37 Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAALDKA 288
LRVLFHL+DGRHGPVG D AIMK MA LP ARYV+VLTKADK DN+VS V+ + ALREAGV PVV+TSA +KLGRD MWRYLRLAALD++
Sbjct: 209 LRVLFHLLDGRHGPVGHDKAIMKEMARLPSYARYVIVLTKADKQDNTVSAGVMAATITALREAGVENAPVVITSAETKLGRDAMWRYLRLAALDRS 304
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7S0AGB6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGB6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-22 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAE-LPDTARYVVVLTKADKS--------DNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAA 276
L++LFHL+D RHGP+ +D IMK + E LP +YVVVLTKADK+ V+R LE V ++ GV PV+L+SA +KLGRD +WRYLRLAA
Sbjct: 54 LKILFHLVDARHGPIDEDSRIMKQVGETLPKNVKYVVVLTKADKNVKGPSTKNSGKVARGTLESVRETMKANGVGNAPVLLSSAETKLGRDDLWRYLRLAA 154
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7S3V5Y5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5Y5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.650e-21 Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAEL-PDTARYVVVLTKADKS--------DNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAA 276
LRV+FHLIDGRHGP+ +D IMK + E P +YV+VLTKADK+ V ++VL+ + A +E GV P++LTSA +KLGRD MWRY+RLAA
Sbjct: 468 LRVIFHLIDGRHGPIDEDFNIMKQVGEQKPKGVQYVIVLTKADKNIKGPNTTNSGKVQKKVLDKLRIAAKENGVGTAPILLTSAETKLGRDDMWRYMRLAA 568
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7S3L5M9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5M9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.290e-20 Identity = 54/101 (53.47%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAE-LPDTARYVVVLTKADKS--------DNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAA 276
L+VLFHL+DGRHGP +D AIMK ++E LP RYVVVLTK+DK+ VS V+E + ++ GV PVV+TSA +KLGRD +W YLRLAA
Sbjct: 501 LKVLFHLVDGRHGPTDEDGAIMKKVSEVLPPYTRYVVVLTKSDKNVKGPNKTNTGKVSIDVMESLGKTMKANGVGSAPVVMTSAETKLGRDAVWNYLRLAA 601
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7S1EK19_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK19_HEMAN) HSP 1 Score: 96.7 bits (239), Expect = 1.650e-20 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSR-TPVVLTSAASKLGRDGMWRYLRLAAL 279
L+VLFHL+D RHGP D +MKL AE +A +VVVLTK DK D V + +++GV AL E G SR TP++ TSA +K GRD +W YL+LAAL
Sbjct: 275 LKVLFHLVDSRHGPQKDDLELMKLYAETKCSAAFVVVLTKIDKIDGKVRQSIVDGVRDALVECGCSRDTPILQTSAETKRGRDEVWNYLKLAAL 368
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A6V1PQB5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PQB5_HETAK) HSP 1 Score: 91.7 bits (226), Expect = 7.170e-20 Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMAE-LPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAAL 279
L+VLFHLID RHGPV D IM + + L A+YVVVLTKADK D V R V V AAL S PVV+TSA S+LGRD MW +L+ A L
Sbjct: 132 LKVLFHLIDSRHGPVETDLEIMGMARDHLAPGAQYVVVLTKADKKDGKVPRAVRAAVAAALEAEYGSGAPVVITSAESRLGRDAMWHHLKRATL 225
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A1Z5KBG2_FISSO (EngB-type G domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBG2_FISSO) HSP 1 Score: 92.0 bits (227), Expect = 9.680e-19 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMK-LMAELPDTARYVVVLTKADKS--------DNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAA 276
LRVLFHL+D RHGP +D AIMK + + P YV+VLTKADK+ VSR V++ V + E GV++ PV+L+SA +KLGR+ +W+YLR AA
Sbjct: 470 LRVLFHLVDARHGPTDEDAAIMKQISVDKPPHVHYVIVLTKADKNVKGAAATNTGKVSRDVMKKVQKTMEENGVAKAPVILSSAQTKLGRNEIWKYLRRAA 570
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7S1EQV8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQV8_9RHOD) HSP 1 Score: 90.1 bits (222), Expect = 4.360e-18 Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMA-----ELPDTARYVVVLTKADKSDNS-VSRQVLEGVVAALREAGV-SRTPVVLTSAASKLGRDGMWRYLRLAALDKA 288
LRV+FHLIDGRHGP+ D ++++++ EL + ++V+VLTK DK D S V V++ V AL+ G+ TP++ TS+ SK+GRD MWRYLR +D+A
Sbjct: 426 LRVVFHLIDGRHGPMDDDRLLLEMVSDLKSKELMSSVQFVIVLTKVDKLDKSKVKSGVMQQTVQALKTVGLLESTPIISTSSQSKIGRDEMWRYLRSVTIDEA 528
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Match: A0A7R9WZ35_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ35_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.660e-18 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 LRVLFHLIDGRHGPVGQDHAIMKLMA-ELPDTARYVVVLTKADKS--------DNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAA 276
L+V+FHL+D RHG + +D IM+ +A LP YVVVLTKADK+ VS +L V ++ V +P++LTSA +KLGRD +WRYL+LAA
Sbjct: 113 LKVVFHLVDARHGLIDEDTTIMQQVATSLPKNVAYVVVLTKADKNVKKSSKHKPGKVSADILTSVRETMKRCKVGNSPIILTSAETKLGRDDIWRYLKLAA 213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10422.405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10422.405.1 >prot_Ecto-sp13_S_contig10422.405.1 ID=prot_Ecto-sp13_S_contig10422.405.1|Name=mRNA_Ecto-sp13_S_contig10422.405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp LRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRback to top mRNA from alignment at Ecto-sp13_S_contig10422:4136..5852- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10422.405.1 ID=mRNA_Ecto-sp13_S_contig10422.405.1|Name=mRNA_Ecto-sp13_S_contig10422.405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10422:4136..5852- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10422:4136..5852- >mRNA_Ecto-sp13_S_contig10422.405.1 ID=mRNA_Ecto-sp13_S_contig10422.405.1|Name=mRNA_Ecto-sp13_S_contig10422.405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10422:4136..5852- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |