mRNA_Ecto-sp13_S_contig10421.404.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A835YRX4_9STRA (Coatomer WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.630e-63 Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNE-GRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
AL G +D+E GV+A+FELV E+ G++RTGQWVG CFLYT++ GRLSYY+GGE MTLCHL+HPMYMLGYLPKEDRVYLMDK + IYSY+V Q+ LQYQTAVVRKDFE AN++LPSIP EYTAVARFLESQGFK+EA V
Sbjct: 502 ALARGAVDAEEGVEAAFELVGEVAGRVRTGQWVGACFLYTSDAGRLSYYVGGEVMTLCHLDHPMYMLGYLPKEDRVYLMDKAKGIYSYKVLQSYLQYQTAVVRKDFEAANALLPSIPASEYTAVARFLESQGFKEEALAV 641
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: D8LNJ0_ECTSI (Vesicle coat complex COPI, beta sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ0_ECTSI) HSP 1 Score: 196 bits (497), Expect = 4.420e-59 Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 1
Query: 100 GDCFLYTNEGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ 414
G+ +GRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ
Sbjct: 157 GERLAIVPKGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ 261
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A6H5K868_9PHAE (Coatomer_WDAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K868_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.560e-58 Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 1
Query: 106 CFLYTN-EGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
CF+ T +GRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV
Sbjct: 5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A7S3HJI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJI1_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.450e-55 Identity = 91/140 (65.00%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNE-GRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
AL +GNI+ + GVD SFEL+ + TGQWVG+CFLYTN G+L+Y +GGE MTLCHL HPMY+LGY+PKEDR +L+DK N++SY++ +ML YQ+AVVR+DF TANS+LP IPK EY AVARFLESQGFK EA QV
Sbjct: 506 ALAAGNINPDEGVDGSFELLSTTNERAHTGQWVGECFLYTNSAGKLNYLVGGEVMTLCHLSHPMYLLGYVPKEDRAFLVDKTYNVHSYKLLLSMLSYQSAVVRQDFVTANSLLPLIPKSEYPAVARFLESQGFKQEALQV 645
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A7S2XXQ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ5_9STRA) HSP 1 Score: 192 bits (487), Expect = 5.780e-54 Identity = 92/139 (66.19%), Postives = 114/139 (82.01%), Query Frame = 1
Query: 4 LQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEG-RLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
L G + E GVD SF+L+HE++ K+RTG WVGDCFLYT G RL+YY+GG+ MTL HL+HPMY+LGYLPKEDRVYL+DKQ N S++V Q++L+YQTAVVRKDF+ AN++LPSIP E++ VARFLESQGFK EA V
Sbjct: 502 LAKGEV-GEDGVDGSFDLLHEISDKVRTGYWVGDCFLYTTAGNRLNYYVGGKVMTLMHLDHPMYLLGYLPKEDRVYLVDKQTNFISFKVLQSVLEYQTAVVRKDFDAANALLPSIPVSEHSDVARFLESQGFKQEAMAV 639
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A8K1CIQ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIQ5_PYTOL) HSP 1 Score: 187 bits (475), Expect = 2.380e-52 Identity = 91/140 (65.00%), Postives = 111/140 (79.29%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEG-RLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
AL +G E GVD SFEL+HE++ K+ TG WVGDCFLYTN G RL+YY+GGE MTL HLE +YMLGYLP+E+ V+LMDK +N+YSY V ML+YQTAVVR+DFETAN+ILP IP+ + VARFLESQGFK+EA +
Sbjct: 502 ALATGAHTPEEGVDGSFELLHEISEKVGTGSWVGDCFLYTNAGGRLNYYVGGEVMTLAHLEQKLYMLGYLPRENLVFLMDKMKNVYSYTVSLVMLEYQTAVVRRDFETANAILPKIPQDQMDYVARFLESQGFKEEALAL 641
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A4D9D3N3_9STRA (Coatomer_WDAD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3N3_9STRA) HSP 1 Score: 186 bits (471), Expect = 8.370e-52 Identity = 92/140 (65.71%), Postives = 112/140 (80.00%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEG-RLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
AL +G + E GV+ SFEL+HE++ K+RTG WVGDCFLYTN RL YY+GG+ MTLCHL+ P YMLGYL KE+RVYLMDKQ N+ SY+V AMLQYQTAVVR+DF AN++L SIP+ E + VARFLESQG+K+EA V
Sbjct: 517 ALAAGQVGEE-GVEESFELLHELSDKVRTGMWVGDCFLYTNNTQRLQYYVGGQIMTLCHLDSPKYMLGYLAKENRVYLMDKQLNVVSYKVLLAMLQYQTAVVREDFAVANTLLSSIPEAELSNVARFLESQGYKEEALVV 655
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A7S3PGW2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PGW2_9STRA) HSP 1 Score: 179 bits (455), Expect = 7.520e-51 Identity = 85/141 (60.28%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEG--RLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
A +G D GVD SFELVHE++ + TGQWVGDCFLYTNE RL+Y +GGE +TLCHL+ MYMLGY+ +E+RVYLMD+ I SY++ +++LQYQTAVVR+DF+ AN ILPS+P+ +Y +ARFLE+QGFK+ A QV
Sbjct: 128 AFANGTADEGEGVDGSFELVHEISEAVGTGQWVGDCFLYTNESGTRLNYCVGGEVITLCHLDRQMYMLGYVARENRVYLMDRNGAIISYKLLESILQYQTAVVRQDFDLANEILPSVPRDQYNDIARFLEAQGFKEVALQV 268
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: K3WFB2_GLOUD (Coatomer_WDAD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFB2_GLOUD) HSP 1 Score: 183 bits (464), Expect = 7.530e-51 Identity = 88/140 (62.86%), Postives = 109/140 (77.86%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEG-RLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
A SG + GVD +F+L+HE++ K+ TG WVGDCFLYTN G RL+YY+GGE MTL HLE MYMLGYLP+E+ V+LMDK +N+YSY V ML+YQTA+VR+DFETAN+ILP IP + VARFLESQGFK+EA +
Sbjct: 503 AFASGANSQDEGVDGAFDLLHEISEKVGTGTWVGDCFLYTNAGGRLNYYVGGEVMTLAHLEMKMYMLGYLPRENLVFLMDKMKNVYSYMVSLVMLEYQTAIVRRDFETANAILPKIPHDQMDYVARFLESQGFKEEALAL 642
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Match: A0A7S2SR98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR98_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.710e-50 Identity = 82/140 (58.57%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 1 ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTN-EGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 417
AL++ + E GV+ SFEL+HE+ ++TGQWVGDCFL+TN RL+Y++GGE MTLCHL+H MYM+GYLPKEDRV+LMD +N+ S+RV ++L++QTAVVR+D E AN ++ IP+ E+T+VARFLESQG K++A Q+
Sbjct: 524 ALETDAVSPEEGVEGSFELLHELADTVQTGQWVGDCFLFTNASNRLNYFVGGEIMTLCHLDHTMYMMGYLPKEDRVFLMDNARNVVSFRVLLSVLEFQTAVVRQDIEEANELIKHIPQSEHTSVARFLESQGLKEQALQI 663 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10421.404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10421.404.1 >prot_Ecto-sp13_S_contig10421.404.1 ID=prot_Ecto-sp13_S_contig10421.404.1|Name=mRNA_Ecto-sp13_S_contig10421.404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp ALQSGNIDSETGVDASFELVHEMTGKIRTGQWVGDCFLYTNEGRLSYYIGback to top mRNA from alignment at Ecto-sp13_S_contig10421:629..2244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10421.404.1 ID=mRNA_Ecto-sp13_S_contig10421.404.1|Name=mRNA_Ecto-sp13_S_contig10421.404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10421:629..2244+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10421:629..2244+ >mRNA_Ecto-sp13_S_contig10421.404.1 ID=mRNA_Ecto-sp13_S_contig10421.404.1|Name=mRNA_Ecto-sp13_S_contig10421.404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10421:629..2244+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |