mRNA_Ecto-sp13_S_contig1039.373.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1039.373.1
Unique NamemRNA_Ecto-sp13_S_contig1039.373.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 3.630e-158
Identity = 228/234 (97.44%), Postives = 229/234 (97.86%), Query Frame = 1 
Query:    1 MATAGEAGEGCKKAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYLRSR 696
            MATAGEAGEGCKKAGMPTWVPPRPLG+GGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS  DF L  R
Sbjct:    1 MATAGEAGEGCKKAGMPTWVPPRPLGEGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKR 234
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.780e-94
Identity = 148/217 (68.20%), Postives = 170/217 (78.34%), Query Frame = 1 
Query:   46 MPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGAL-SLGAGDKRS--DFYL 687
            MP W  P P G  GL   + + +PL+V NSLTRTK  F+PK+  RVLWYMCGPTVY  SHMGHARTYLHFDILRR+M D+F Y+V L MNITDIDDKII RAN+   N+R+LA+HFE DYM+DM  LGVR P  +TRVSEF+PEVV YI+ +I NGYAYESNGSVYF+VQ+F   KGH Y KLLPEG+GN ELMAEGEGAL S GAGDK+S  DF L
Sbjct:    8 MPEWHGPPPFGVEGLAPELLQFFPLRVTNSLTRTKIPFIPKEGQRVLWYMCGPTVYDGSHMGHARTYLHFDILRRIMADYFNYNVVLVMNITDIDDKIILRANQRNLNFRDLASHFEADYMEDMKALGVRPPEHITRVSEFVPEVVAYIEQVIANGYAYESNGSVYFDVQAFHKHKGHHYGKLLPEGLGNAELMAEGEGALTSCGAGDKKSQSDFAL 224
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BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: H3H2X5_PHYRM (Cysteine--tRNA ligase n=24 Tax=Phytophthora TaxID=4783 RepID=H3H2X5_PHYRM)

HSP 1 Score: 259 bits (662), Expect = 5.480e-79
Identity = 132/249 (53.01%), Postives = 163/249 (65.46%), Query Frame = 1 
Query:   49 PTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKR--SDFYL 687
            PTW PPRP+   GLTE  D  YPL+++NS+TRTK  FVP    RVLWYMCGPTVY  +H+GH RTY  FD +RR++ +FFG +V L MNITD+DDKII RA E G                                  +  REL+  +E+ ++ DMA L ++ PTV+TRVSE++PEVVE+++GII NG+AYESNGSVYF+  +F G KG AY KLLPE VG  EL+AEGEGALS G  DKR  SDF L
Sbjct:   13 PTWYPPRPIE--GLTEYWDTHYPLRLYNSMTRTKNAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEEFFGMEVELVMNITDVDDKIILRAAETGWLETHPGKELPKDKDEKTKLVMQWAAQQPAEDNMRRTRELSKFWEKSFLDDMASLNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFDTAAFGGSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFAL 259
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BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A024TLI1_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLI1_9STRA)

HSP 1 Score: 257 bits (656), Expect = 3.570e-78
Identity = 132/253 (52.17%), Postives = 165/253 (65.22%), Query Frame = 1 
Query:   37 KAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            K G PTW  P+P+    L E  DR YPLK++NS+TRTKT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY V L MNITD+DDKII RA E G                                  Q   +L+ +FE+ +M DMA L ++ PTV+TRVSE++PE+VE++QGII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  EL+AEGEG+LS+GA DKR+  DF L
Sbjct:    8 KKGQPTWYMPQPMQS--LMEYWDRHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDVDDKIIVRAAENGWTEAHPGQSLPASKDEAAKTVLAWASEQTAESNMQRTSDLSKYFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVQGIIANGYAYESNGSVYFDTVAFAKAKGKNYGKLVPENVGQSELLAEGEGSLSVGASDKRNGNDFAL 258
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BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A6G0XIC0_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIC0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 8.760e-78
Identity = 129/253 (50.99%), Postives = 166/253 (65.61%), Query Frame = 1 
Query:   37 KAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYR----------------------------------ELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            K G PTW  P+P+    L E  +R YPLK++NS+TR+KT FVP  + R+LWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY+V L MNITDIDDKII RA E G N                                    +L+ +FE+ +M DMA L ++ PTV+TRVSE++PE+VE+++GII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  EL+AEGEG+LS+GA DKR+  DF L
Sbjct:    5 KKGQPTWYMPQPMNS--LIEYWERHYPLKLYNSMTRSKTTFVPMQNKRILWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYEVELVMNITDIDDKIIVRAAENGWNEAHPGQSLPADKDAAAKTVLQWASEQSAESNMKRTADLSKYFEKTFMDDMAALNIKPPTVLTRVSEYVPEIVEFVEGIIKNGYAYESNGSVYFDTVAFGKSKGKNYGKLVPENVGQSELLAEGEGSLSVGASDKRNANDFAL 255
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A425DGJ7_9STRA (tRNA-synt_1e domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DGJ7_9STRA)

HSP 1 Score: 255 bits (651), Expect = 2.730e-77
Identity = 132/265 (49.81%), Postives = 169/265 (63.77%), Query Frame = 1 
Query:    1 MATAGEAGEGCKKAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            M+T+  A     K G PTW  P+P+    L E  +R YPLK++NS+TRTKT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY V L MNITD+DDKII RA E G                                  Q   +L+  FE+ +M DMA L ++ PTV+TRVSE++PE+VE+++GII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  +L+AEGEG+LS+GA DKR+  DF L
Sbjct:    1 MSTSAAAAAAPAKKGQPTWYMPQPMNS--LMEYWERHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDVDDKIIVRAAENGWTEAHPGQSLPANKDEAAKVVLAWASEQSAESNMQRTNDLSKFFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVEGIIANGYAYESNGSVYFDTIAFGKAKGKNYGKLVPENVGQSDLLAEGEGSLSVGATDKRNGNDFAL 263
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BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A1W0A9P0_9STRA (Cysteine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9P0_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.880e-77
Identity = 133/249 (53.41%), Postives = 166/249 (66.67%), Query Frame = 1 
Query:   49 PTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            PTW  P+P+    L E  +R YPLK++NS+TR+KT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY+V L MNITDIDDKII R+ E G                                  +   ELA  FE+ +M+DMA L ++ PTV+TRVSE++PE+VE+IQGII NGYAYESNGSVYF+ Q+F   KG AY KL+PE VG  EL+AEGEGALS+GA DKR+  DF L
Sbjct:   11 PTWYMPQPMNS--LLEYWERHYPLKLYNSMTRSKTPFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYEVKLVMNITDIDDKIIVRSAENGWAQAHPGKSLPANKEEAAKTVLQWASDQSAESNMKRTEELAKKFEKTFMEDMAALNIKPPTVLTRVSEYMPEIVEFIQGIITNGYAYESNGSVYFDTQTFGKSKGKAYGKLVPENVGQSELLAEGEGALSVGATDKRNANDFAL 257
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: W4FBG7_9STRA (Cysteine--tRNA ligase n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBG7_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.070e-77
Identity = 132/265 (49.81%), Postives = 169/265 (63.77%), Query Frame = 1 
Query:    1 MATAGEAGEGCKKAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            M+T+  A     K G PTW  P+P+    L E  +R YPLK++NS+TRTKT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY V L MNITD+DDKII RA E G                                  Q   +L+  FE+ +M DMA L ++ PTV+TRVSE++PE+VE+++GII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  +L+AEGEG+LS+GA DKR+  DF L
Sbjct:    1 MSTSAAAAAAPAKKGQPTWYMPQPMNS--LMEYWERHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDVDDKIIVRAAENGWTEAHPGQSLPANKDEAAKAVLAWASEQSAESNMQRTNDLSKFFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVEGIIANGYAYESNGSVYFDTIAFGKAKGKNYGKLVPENVGQSDLLAEGEGSLSVGATDKRNGNDFAL 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A485LI47_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI47_9STRA)

HSP 1 Score: 249 bits (637), Expect = 2.120e-75
Identity = 129/253 (50.99%), Postives = 161/253 (63.64%), Query Frame = 1 
Query:   37 KAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKR--SDFYL 687
            K   PTW  P+P+    L E  +R YPLK++NS+TRTKT FVP  + RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FGY V L MNITDIDDKII R  E G                                  +    L+ +FE+ +M DMA L ++ PTV+TRVSE++PE+VE++QGII NGYAYESNGSVYF+  +F   KG  Y KL+PE VG  EL+ EGEG+LS+GA DKR  SDF L
Sbjct:    6 KKTQPTWYMPQPMNS--LMEYWERHYPLKLYNSMTRTKTTFVPMQNKRVLWYMCGPTVYDITHLGHGRTYTCFDYVRRILEDYFGYQVELVMNITDIDDKIIVRGAENGWTEAHPGQSLPANKDEAAKVVLQWASEQTAESNMKRAENLSKYFEKTFMDDMAALNIKPPTVLTRVSEYMPEIVEFVQGIIANGYAYESNGSVYFDTIAFGAAKGMNYGKLVPENVGQSELLEEGEGSLSVGASDKRNASDFAL 256
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Match: A0A0P1B2V9_PLAHL (Cysteine--tRNA ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2V9_PLAHL)

HSP 1 Score: 249 bits (636), Expect = 2.250e-75
Identity = 126/249 (50.60%), Postives = 161/249 (64.66%), Query Frame = 1 
Query:   49 PTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGG----------------------------------QNYRELAAHFEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRS--DFYL 687
            PTW PPRP+   GLTE   + YPL+++NS+TR+K  FVP    RVLWYMCGPTVY  +H+GH RTY  FD +RR++ D+FG +V L MNITD+DDKII RA E G                                  +  REL+  +E+ ++ DMA L ++ PTVVTRVSE++PE+VE+++GI+ NG+AYESNGSVYF+  +F    G AY KLLPE VG  EL+AEGEGALS G  DKR+  DF L
Sbjct:   14 PTWYPPRPIA--GLTEYWAKHYPLRLYNSMTRSKNAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGLEVELVMNITDVDDKIILRAAETGWIKANPGKNLPLDKDEKAKLVMNWAAQQPTEDNMRRMRELSKFWEKSFLDDMAALNIKTPTVVTRVSEYVPEIVEFVEGIMKNGFAYESNGSVYFDTVAFGRSGGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNGNDFAL 260
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1039.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE3.630e-15897.44Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA4.780e-9468.20Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
H3H2X5_PHYRM5.480e-7953.01Cysteine--tRNA ligase n=24 Tax=Phytophthora TaxID=... [more]
A0A024TLI1_9STRA3.570e-7852.17Cysteine--tRNA ligase n=1 Tax=Aphanomyces invadans... [more]
A0A6G0XIC0_9STRA8.760e-7850.99Cysteine--tRNA ligase n=1 Tax=Aphanomyces euteiche... [more]
A0A425DGJ7_9STRA2.730e-7749.81tRNA-synt_1e domain-containing protein n=1 Tax=Aph... [more]
A0A1W0A9P0_9STRA2.880e-7753.41Cysteine--tRNA ligase n=1 Tax=Thraustotheca clavat... [more]
W4FBG7_9STRA3.070e-7749.81Cysteine--tRNA ligase n=7 Tax=Aphanomyces astaci T... [more]
A0A485LI47_9STRA2.120e-7550.99Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatu... [more]
A0A0P1B2V9_PLAHL2.250e-7550.60Cysteine--tRNA ligase n=1 Tax=Plasmopara halstedii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1039contigEcto-sp13_S_contig1039:558..5015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score257.3
Seed ortholog evalue6.9e-66
Seed eggNOG ortholog164328.Phyra84779
Model size696
KEGG rclassRC00055,RC00523
KEGG koko:K01883
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons6
EggNOG free text desc.DALR domain
EggNOG OGs3QEIV@4776,COG0215@1,KOG2007@2759
EC6.1.1.16
Cds size696
COG Functional cat.J
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1039.373.1prot_Ecto-sp13_S_contig1039.373.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1039 558..5015 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462527.5493078-CDS-Ecto-sp13_S_contig1039:557..6981681462527.5493078-CDS-Ecto-sp13_S_contig1039:557..698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 558..698 -
1681462527.561721-CDS-Ecto-sp13_S_contig1039:1314..13921681462527.561721-CDS-Ecto-sp13_S_contig1039:1314..1392Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 1315..1392 -
1681462527.5710347-CDS-Ecto-sp13_S_contig1039:2402..25221681462527.5710347-CDS-Ecto-sp13_S_contig1039:2402..2522Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 2403..2522 -
1681462527.582193-CDS-Ecto-sp13_S_contig1039:2892..30141681462527.582193-CDS-Ecto-sp13_S_contig1039:2892..3014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 2893..3014 -
1681462527.5919676-CDS-Ecto-sp13_S_contig1039:3621..37061681462527.5919676-CDS-Ecto-sp13_S_contig1039:3621..3706Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 3622..3706 -
1681462527.6001105-CDS-Ecto-sp13_S_contig1039:4865..50151681462527.6001105-CDS-Ecto-sp13_S_contig1039:4865..5015Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1039 4866..5015 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1039.373.1

>prot_Ecto-sp13_S_contig1039.373.1 ID=prot_Ecto-sp13_S_contig1039.373.1|Name=mRNA_Ecto-sp13_S_contig1039.373.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
MATAGEAGEGCKKAGMPTWVPPRPLGQGGLTEMMDRMYPLKVFNSLTRTK
TRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYDV
SLCMNITDIDDKIITRANEGGQNYRELAAHFEEDYMQDMALLGVRAPTVV
TRVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFDGKKGHAYAKLLP
EGVGNGELMAEGEGALSLGAGDKRSDFYLRSR
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mRNA from alignment at Ecto-sp13_S_contig1039:558..5015-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1039.373.1 ID=mRNA_Ecto-sp13_S_contig1039.373.1|Name=mRNA_Ecto-sp13_S_contig1039.373.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4458bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1039:558..5015- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCACTGCCGGGGAAGCGGGAGAGGGATGCAAGAAGGCCGGCATGCC
CACATGGGTGCCTCCGAGACCGCTCGGCCAAGGAGGCTTGACGGAGATGA
TGGACAGGATGTACCCTCTCAAGGTCTTCAACTCGCTAACGAGAACAAAG
GTATGCAGTGAACTAAAGGTCATAACGCTGCTGTTGCCGTGGTCGTTGTG
TGTGTGTCGCTCTACTCGTGTGGCAGAGTGTTGTTGCGTTTGCAAGCTGT
GGTGCGGAACGTGGAACACGCGAGGATGTGTGCGGTTGGCACAGAGCGGT
CGGCTCAGCTCTGCTGCATTAGCGGAGCTGCGAGTACGTTGCCAACAGCA
GTCTGGCACCTTATGACGCGCATCTCCCCTCAATTTTCCGATTTACAGGG
TGAGCAATCATTCAATAGTGTTCCAATGGGGCAACGAGGGTGTGACATGT
CACCATTTAAACTATGCAACCAGCAGTTGCACAACATACACAGATTCCGC
CGTTTAGGCCGTAGTCCGCAGCGGTAGTCCACTTTTTGTACCTGGCCGTG
CCCCGTGCTGCTAGCGCGTACGTTCTGCGCACGATGCGCGTCCCTACCTG
CACAATTGTCGCAGTGGTATGTTTTGCGGTCATTCGTTGTCTACCAAAAC
ATCGGCATCTACGAAACATAACCACACGAAGGCCGTGGAACTTTCTCCAA
CTGCTGCGAATAGCACGGGGCGCAGTTTGTCCGCACTTGTGGTCCCTGGC
GAGTTTGAATGTCGTGCCACATAGCGGTGATTCGTGTCGCTCACACGAGC
ACACCTCAACCGGTCGTGCGGCAGGAAGTTGACTGTTAACACGGAATAAT
GTGTGGGTCTAATTACTGGTCCCCAGGTTCCTCAAGACAAGAAAATACGT
GCTCAAAAGCGTTGTTATCCCGCATTGGAGGGTTTCACATCGTGAGCATC
CCTGCAATGTTCCTCAAGTACGATTCTCAAGACAAACCCAGGGTACAGCG
TTGTACGTGTCTCCGGAACGCCTCGTATCTGAATCGGTAGGCTAGGGGCG
GAGAGAGAAGGCGGGCAGGACTTTCCCTGATGGGGCACGTCACAAAGACG
GCAATGAAGAGCTGTCGATCGTGCGTTTTAGAAGTTGACCGGAATACCAC
TACCTCTCCCCTGTCACTTCCAGCAACCTTGGTATCCTTCCTTTCTTCTT
TACAAGGTATCGGCCAATGTTTTGGACGCTGTTCCTCATCATCAACTCCT
GTCTATGCACCCCCCACCTCTCTTCGCCCCTCGCCCACCTTTCCTATCGC
CTGCGGCAGACTCGGTTTGTGCCTAAAGACTCCAACCGGGTGCTATGGTA
CATGTGCGGACCCACTGTCTACGCCCCCAGCCACATGGGCCACGGTGAGA
CCATTCCCGAGAGAGAAAGAGATAGAGTCTCGGGGGGAGCAGGGGGGGCA
GTTTTGTCCACACTGTGATCTCTGGCGAGTTTGAATGTAGTAGTGATCAT
TTGTCGCTCACACGAACACACCATTCCCTGGTGTGCGTCAGGATGTTGGT
CTAGGTTGAACATCACCGGGCCACCGAAGACAAGCGCTAGAGACGCCCTT
TATTATTCAGCAGCAGAGGTTACGTCCTTGGCATTCCGATATTCGTAGGA
GAGACAAGGAGAGAGGAAAGGAGGGCACGCCGATACGATCGGAAAGAGAG
AAAGCGGGATAAATCGCGCCTACCTGTAGAAGGCCGTGTGGTGAACCCCG
TCCCGTCCCTCGACCGATGCTGTGAAGACGTGTAGCAGGGGGCGACAAAG
AACGCAGCTTCTGAACACCCTGGAGAGGAAGTTTTTTTCAACACGCCTTA
TGGAAATCGCACGAGGCGTCAATCGTGTGTAGTGTCTGATCAAGGCCCAC
GCCACTGCATCCCTCCTGCTTTTTGGTCGCGAGGAAGACATTGTCGGCTC
TTCTTACAAACTATCTGCTGTTCTTTCGACGCGTGCTTGTGCCTCTCTCA
GCGCGGACCTACCTGCACTTCGATATTCTTCGGCGCGTGATGACCGATTT
CTTCGGGTACGACGTGTCTCTGTGCATGAACATCACCGACATCGATGACA
AGATCATCACCAGGGCCAACGAGGTGCGTCCCTGTCAGCCTGGATACCGC
GTTTTCAGCGGTGCGAGCTGGACGGGCTTGGATTTCGATACCTCTTCATG
GCTTGGTCGGATGAGATGCTCTCTCTGCAGCGTGGATGGATATGAAATGC
GGCGCTGACTTTGGTCGTGTCGCTCCTCGTCTGTCTGCCTGCTTGTCTTT
GTGTCTTCTGTCTGTCTCGTCTCTGTCTCTGTCTCTGCAATCTCTCCGCA
TCTCTCTCTTATCTCCCTCTCTTTCTCTCCCACCCTCCCTCTCTGTCGGG
CTGTCGGCCGTCTCCCCGGGTATCCATCGGGTGGGCATGCATCCCTCTCC
ACGTTTACGTACGTGCCTTTCCGGGCGCGCGGGGGTGGGGCAGGGCGGGC
AAAATTATCGGGAGCTGGCGGCCCACTTCGAGGAGGACTACATGCAGGAC
ATGGCCTTGCTAGGCGTGCGCGCCCCCACCGTCGTGACACGCGTCAGTGA
GTTCATCCCGGAGGTGAGAGAAGGAGGAGAGGACTGCTGTTTGGGTTGTT
TCAGTAAGAGAGGGGCAGGGGGGGAGTGCACATGCTTTTTCCTTTTTTCA
TGTCGGACCGTTGACCACAAGTCCTCGACAGGGCGGAGTATTGTTTCCAC
AGCGCCGATGGTGAATCGCTCCTTCTTACGTTCACTCTCCTGTCTGTATC
ACTTCTCGCCTGCGCGGGGGGGGGGCGTACTCCGAATATACGAGAGAGGC
ATCGCGAGCGTTCGGGCGCTGTTCTAGATGGTTGTGTTGTAGATGTGACA
ATCTGGGGAGTGGGACGCGGATAGAGACAGGGGGGCGTCGGGCGGGGCGT
GACTTGTATCCGGGTTTGTGGTGTTGTCGAACGTTCGGTGGTCTCCACGT
GAATGCGGGTACTCTATGTGCAGGTCTTTATGTGTGTTCAAGAGACAAGC
CCGGCGGGGCTCCGTCCTCTTTTGGGCGCATGCTTTCGATGAAAAGGGTG
AGGTTCATCCTTGAGTTCATGTGGGGAGCAGCATTCGGACGGGGGGGCGA
CGGTCCCACGGTGCCGAGATATATTCCGTGCTGTACTTGTAGGGTTTTGT
ATCTTAGTCTCGAACCCGTGTTGTATGTAAGCTTTCTGTTGCACAATTCT
CAATCCCAAACACTGAAAAAATATGGTATGATTTTGCTACAACCCAACAC
CAAATCTTGTAATTGACCCCTCTCTCAATTCGATGGTCCTTGTAGGGCCA
TCTTCTGATATTCCTATCCATTTGCCCCCCTTGGAGGAGGGCGCAGATCG
AGAGAGAAAGCGGTAGTTTGCGCTGTTGGTTTTTCCTCGGATTCTGCCTG
GCTATTCCGCCGCATGTTGGAGGTGTCCTTGACGTCGTTTCTTGCTCTCA
GCTTCCTATCGACCTCGGCTTCCGCTGCGATTTGGTTCTGAACTGGCTTT
CGTTTCTGGCGTTCGTAATGTTTGCTTTTTCCTTGCTCCCGTGTGCTTGC
CGCGGTGTGTGCGTGGCCATCAGGTGGTGGAGTACATCCAAGGCATCATC
GACAACGGCTACGCGTACGAGTCGAACGGTTCTGTCTACTTTAACGTTCA
GGTCAGCACTAGCACAAGAACCAGCACCACCTGCACCAGCCACATCACTC
GCTGTTTTCCAACGCCTTCTCAGCGTACGTGTCGCCATGCGCCAACGGGG
GTGGGGGGCGTGGTTGACTCATCATCGTTCGGCAGCTAGCTATCGTGCCT
AAGACGCGTTCCATACAGCGGTGCGGTGAAAGACGGAGGGCGAAAGCCGC
CTTCAAGGTCACGCGCCTGCCGCCGTGGTGTGTGGCAGACCTGGCGGAAG
TGATTCCTCACTGCTGTGAGAGTGAAGTGTGGCCGCTGCACGCCTACCGC
GATCGGCGAGGGATGGGTGCACTCCGACTGTGCAATAGCCCTTCCAGTCC
GCCGTGTCGCAAGTCGTTAGTCCAACCCCCCTGTTCTTGAACGAGCGGGA
GCCTCGAGGTGTGCATGCCTGTCGGCCTGCCCAAACCTACCGTCCCATCC
GTCCCCTTTCCACTCCCTCACGTCTCCTCCGGCAACGACTATACAACACT
GTACGTGTCATGAGTCGTTTTTGACCTCGCCCCCGCTTCTCCCTCTTCCT
CATTGCCACACCGCCTTTTCCTTCGTGTGGCTATATGATATATAATGTTC
TTGTTGTTTCCGCCAAGTCCTTCGACGGGAAGAAGGGGCACGCGTACGCT
AAGCTCTTGCCCGAGGGGGTCGGCAACGGGGAGCTCATGGCGGAAGGGGA
GGGTGCGCTCAGCCTAGGGGCCGGCGACAAGAGGTCAGACTTTTACCTCC
GATCAAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1039:558..5015-

>mRNA_Ecto-sp13_S_contig1039.373.1 ID=mRNA_Ecto-sp13_S_contig1039.373.1|Name=mRNA_Ecto-sp13_S_contig1039.373.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1039:558..5015- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCACTGCCGGGGAAGCGGGAGAGGGATGCAAGAAGGCCGGCATGCC
CACATGGGTGCCTCCGAGACCGCTCGGCCAAGGAGGCTTGACGGAGATGA
TGGACAGGATGTACCCTCTCAAGGTCTTCAACTCGCTAACGAGAACAAAG
ACTCGGTTTGTGCCTAAAGACTCCAACCGGGTGCTATGGTACATGTGCGG
ACCCACTGTCTACGCCCCCAGCCACATGGGCCACGCGCGGACCTACCTGC
ACTTCGATATTCTTCGGCGCGTGATGACCGATTTCTTCGGGTACGACGTG
TCTCTGTGCATGAACATCACCGACATCGATGACAAGATCATCACCAGGGC
CAACGAGGGCGGGCAAAATTATCGGGAGCTGGCGGCCCACTTCGAGGAGG
ACTACATGCAGGACATGGCCTTGCTAGGCGTGCGCGCCCCCACCGTCGTG
ACACGCGTCAGTGAGTTCATCCCGGAGGTGGTGGAGTACATCCAAGGCAT
CATCGACAACGGCTACGCGTACGAGTCGAACGGTTCTGTCTACTTTAACG
TTCAGTCCTTCGACGGGAAGAAGGGGCACGCGTACGCTAAGCTCTTGCCC
GAGGGGGTCGGCAACGGGGAGCTCATGGCGGAAGGGGAGGGTGCGCTCAG
CCTAGGGGCCGGCGACAAGAGGTCAGACTTTTACCTCCGATCAAGG
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