mRNA_Ecto-sp13_S_contig10375.367.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A6H5JZI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI2_9PHAE) HSP 1 Score: 617 bits (1590), Expect = 2.400e-204 Identity = 384/453 (84.77%), Postives = 394/453 (86.98%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSAFDWGSLTLDGESKTTGDGLNPALAMTTPRVGSYSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSIFTNEGIADQALREFGEGSNKSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETLSTFXXXXXXXXXXXXXXXXXXRTRESKSAATAISAVAAWSASASARPAPMGXXXXXXXXXXXHSGVGGRQGPPLRLRSMGGEDAFVSSIGXXXXXXXXXPPMGLKTPSRTLSRNTSYGILLRSPLVGHGLRGPAAMSPVPTGFFNAVGGPAGAGEGGGVTATAKARGWGGEESLKTPKPG 1359
DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFD+FVVGLAVCCRGTLEEKMRFLFGVYD+NEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSA DW S TLDGE+KTTG GL+PALAMTTPRVGSYSRG XXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRS+FTNEGIADQALREFGEGS+KSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETL+TF RTRESKSAATAIS VAAWSASASARPA MGXXXXXXXXXXX RQ PPLRLRS XXXXXXXXX LKTPSRTLSRNTSYG LLRSPLVGHGLRGPAAMSP P GFFNAVGGPAGAG+GGGVTA G GGEESL+TP+PG
Sbjct: 24 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMRFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSALDWDSRTLDGETKTTGYGLDPALAMTTPRVGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETLTTFDSPHRSSAVSALPFTTPRRTRESKSAATAISCVAAWSASASARPASMGXXXXXXXXXXXXXXXX-RQAPPLRLRSXXXXXXXXXXXXXXXXXXXXXXXXXLKTPSRTLSRNTSYGNLLRSPLVGHGLRGPAAMSPRPRGFFNAVGGPAGAGDGGGVTAXXXXXGSGGEESLQTPRPG 475
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: D8LIC5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI) HSP 1 Score: 135 bits (341), Expect = 1.200e-30 Identity = 93/279 (33.33%), Postives = 125/279 (44.80%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLLNIG-IEPVDRSAFDW---GSL------------------TLDGESKTTGDGLNPALAMTTPRVGSYSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPR-SIFTNEGIADQALREFGEGSNKSLTFDQFQRWAQSTPAVQALLQGAFPSDAH 768
D+ E+ VI T+KDL ++ G IDK TFLQ P+PGL+G+RLF D SG I ++ FV GLAV CRG+ EEK+ F+F +YDI+ G + RDEL +LN VP++++ G +D +A + GS ++ GE G + A T + GS G S GG A P IFTN I DQA E L+F +F+ W + P V LQ FP D H
Sbjct: 17 DECEIKVIKETFKDLCHVNGGSM---RIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFGRAVALDATAAEERARGSALRPRAEGREPPPAGVAPESVGGEGAAAGAVVGAAAHATELKAGSAGGEGESSGRSRRGTARSDS-------------STEGGASFAAAQHHPHWEIFTNNDIVDQAFEECDLNQTGKLSFPEFRLWVERNPIVTQFLQSVFPYDEH 279
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A7S3HBN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN9_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.770e-25 Identity = 78/273 (28.57%), Postives = 127/273 (46.52%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPR---------TLLNIGIEP--------VDRSAFDWGSLT----LDGESKTTGDGLNPALAMTTPRVGSYSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSIFTNEGIADQALREFGEGSNKSLTFDQFQRWAQSTPAVQALLQGAFP 756
D E+HV+ T++DL+ S G IDK TFLQ FP+ GL+G+RLF D+ K+G I FD+F++GLA CRG++++K+ F+F +YD++ D + + +L +LNQ+P+ TL + +P ++R GS T ++G T + PAL G+ GG +T D +TN + ++A E + L+++QF+ W Q TPA+ ++ P
Sbjct: 35 DTDEIHVLRKTWQDLSDRSDGS----GIDKETFLQYFPLNGLLGERLFAQFDNKKTGSIDFDDFILGLATVCRGSMDDKIHFVFNMYDVSHDNTVSKQDLTTLLNQIPKEALSDPSHHTLDHFSNQPPHSPLPFEMNRQRSHSGSSTTLSEINGAGSTDDNHTAPALPPLQQTFGNAP-------GILERSDSDAPAPVPGLARDTSSNLNLGGQIT-EFDYEDVDFYTNHDMVEKAFEECDLNHDGRLSYEQFKMWVQRTPALMEYIESILP 295
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A6H5L0T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE) HSP 1 Score: 116 bits (290), Expect = 5.810e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLLNIG 345
D+ E+ VI T+KDL ++ G IDK TFLQ P+PGL+G+RLF D SG I ++ FV GLAV CRG+ EEK+ F+F +YDI+ G + RDEL +LN VP++++ G
Sbjct: 22 DECEIKVIKETFKDLCHVNGGSM---RIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFG 133
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A835YJT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT6_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.870e-23 Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLN 315
D E+ V+ T+KDL +S G S+DK TFLQ FP+PGL+G+RLF D+ +SG++ F+ FV GLAV CRG ++K+ F+F +YD++ G + R+EL +++
Sbjct: 5 DHCEITVLRQTFKDLCAISGK---GTSVDKETFLQYFPLPGLLGERLFAVFDTKRSGKVDFEEFVCGLAVTCRGDWDQKVDFIFSLYDVHGTGAVSREELTALVS 106
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A8K1FIK0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIK0_PYTOL) HSP 1 Score: 108 bits (269), Expect = 2.020e-21 Identity = 60/158 (37.97%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 10 ELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLL---NIGIEPVDRSAFDWGSLTLDGESKTTGDGLNPALAMTTPRVGSYSR 474
E+H++ T+K LA + K G ++DK TFL+ FP+PGL+G+RLF +D + SG I ++ FV GLA+ RGT +EK++F+F +YD+++ G I R EL+ ML+Q P + L N+ EP D S T + +K D + + + P +++R
Sbjct: 30 EIHLLRETFKGLANV----KNGAAVDKETFLKCFPLPGLLGERLFEVIDKDGSGSIGYNEFVYGLAILFRGTRKEKLKFIFDLYDLSDTGSISRYELVTMLHQFPASTLEHLNLTEEP-DTS-------TSEPSTKNINDEIEALVDLAFPTGHAHAR 175
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A836CA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA22_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.230e-21 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLN 315
DD E+ VI T+KDL LS GD IDK TFLQ FP+PGL+G+RLF D G + ++ FV GLAV CRG+ EK+ F+F +YD++ G + R EL +++
Sbjct: 22 DDCEIKVIRETFKDLCHLS-GDN--TRIDKETFLQYFPLPGLLGERLFAVFDKKNIGEVDYEEFVCGLAVTCRGSWAEKVEFIFNLYDVHGVGAVSRGELAALVS 123
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A2D4CGZ4_PYTIN (Protein kinase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGZ4_PYTIN) HSP 1 Score: 106 bits (264), Expect = 3.330e-21 Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 10 ELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLLNI 342
E+H++ T+K LA K G ++DK TFL+ FP+PGL+G+RLF +D + SG I+++ FV GLA+ RG+ EK++F+F +YD+ G I R EL+ ML+Q P + L+I
Sbjct: 30 EMHLLRETFKGLADA----KNGNTVDKETFLKCFPLPGLLGERLFEVIDKDGSGSIAYNEFVYGLAILFRGSQREKLKFIFDLYDLTATGSISRHELVTMLHQFPESALDI 136
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A2R5G5N4_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5N4_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.660e-21 Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 10 ELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLL 336
EL ++ + YKDLA S G +IDK TFL+ FP+PGL G+RLF+ D +G + F+ FV GLA+C RGT EEK+R +F +YDI+ + + + EL ML+QVPR L
Sbjct: 47 ELDMLRMCYKDLAQRSPG----RTIDKDTFLKFFPLPGLHGERLFYVFDHKHTGAVDFEEFVSGLALCLRGTFEEKVRVIFRIYDIDNNDTVSKAELRTMLHQVPRDSL 151
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Match: A0A7S0K6K0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K6K0_CAFRO) HSP 1 Score: 102 bits (253), Expect = 7.490e-21 Identity = 48/109 (44.04%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 10 ELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDNFVVGLAVCCRGTLEEKMRFLFGVYDINEDGLIGRDELLLMLNQVPRTLL 336
EL V+ T+ +L+ S G +IDK TFL+ FP PGL+G+RLF D+ K+G + ++ F+VGLA CRG+++++MRF+F V+D++ DG + R EL +L+ +PR +L
Sbjct: 40 ELTVLRSTFNELSERSPGT----TIDKHTFLKAFPWPGLLGERLFDMFDTKKTGAVDYEEFIVGLARVCRGSVDDRMRFIFEVHDLSGDGSVSRAELRTLLHHLPRPVL 144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10375.367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10375.367.1 >prot_Ecto-sp13_S_contig10375.367.1 ID=prot_Ecto-sp13_S_contig10375.367.1|Name=mRNA_Ecto-sp13_S_contig10375.367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp DDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHAback to top mRNA from alignment at Ecto-sp13_S_contig10375:1868..5873+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10375.367.1 ID=mRNA_Ecto-sp13_S_contig10375.367.1|Name=mRNA_Ecto-sp13_S_contig10375.367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4006bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10375:1868..5873+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10375:1868..5873+ >mRNA_Ecto-sp13_S_contig10375.367.1 ID=mRNA_Ecto-sp13_S_contig10375.367.1|Name=mRNA_Ecto-sp13_S_contig10375.367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10375:1868..5873+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |