mRNA_Ecto-sp13_S_contig10370.363.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: D8LAY6_ECTSI (Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 2.850e-146 Identity = 229/242 (94.63%), Postives = 230/242 (95.04%), Query Frame = 1
Query: 1 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLICMRGG 726
QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSR VRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVD+DSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPW TTRLFRLASSDPRILRPRYESLE VAGGGTGFLRLWFAAP GTNVRKE FLFVNDSEGQNEECLLICMRGG
Sbjct: 2808 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWNTTRLFRLASSDPRILRPRYESLE--------VAGGGTGFLRLWFAAPGGTNVRKEAFLFVNDSEGQNEECLLICMRGG 3041
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A835YU49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA) HSP 1 Score: 280 bits (715), Expect = 7.690e-83 Identity = 138/253 (54.55%), Postives = 174/253 (68.77%), Query Frame = 1
Query: 4 EVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKF--------------VAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLICMR 720
E+ +K RVG FPS FYLL+YDD + LYE WHV+V +RLR+DVH+ LGQ S ADL+VRGDRYSR VR F+S PA+ F+P + FQLV GAYNRV++R+RP TG KI VH+VD+D+ E+VGAWLATATA+PPV+TK+Y+++LP+G+ HKRIAY+NPW R FRL SSD ++ PR+ LE VA GGTGF+RLW AP+ EVFLFVND QNEE + +R
Sbjct: 3038 EIFIKYRVGAFPSAGEFYLLLYDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAADLVVRGDRYSRRVRCFTSAPADCEFDPPSTFQLVSGAYNRVDMRYRPTRTGGSKIQVHMVDVDTQELVGAWLATATALPPVVTKTYELDLPVGKESHKRIAYANPWLQARAFRLRSSDETVMAPRHGGLEXXXXXXXXXXXXXXXXXXXXXXVAAGGTGFIRLWLHAPDAAG-SAEVFLFVNDENDQNEEYNMDMLR 3289
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A836CDE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE8_9STRA) HSP 1 Score: 245 bits (625), Expect = 6.800e-79 Identity = 126/234 (53.85%), Postives = 157/234 (67.09%), Query Frame = 1
Query: 19 CRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLICMR 720
C G+F YLL++DD + LYE WHV+V +RLR+DVH+ LGQ S A+L+VRGDRYSR VR FSS P + F+P FQLV GAYNRV H+VD+D+ E+VGAWLATATA+PPV+TK+ +++LP+G+ HKRIAY+NPW+ R FRL SSD ++ PR+ LEA A GGTGF+RLW AP+ EVFLFVND QNEECLLI MR
Sbjct: 4 CSAGEF------YLLLHDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAANLVVRGDRYSRRVRCFSSAPGDCEFDPPTTFQLVSGAYNRV----------------HMVDVDTQELVGAWLATATALPPVVTKTNELDLPVGKESHKRIAYANPWSQARAFRLRSSDETVMAPRHGGLEA--------AAGGTGFIRLWLHAPDAAG-SAEVFLFVNDENDQNEECLLIRMR 206
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A7S2QW27_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW27_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.150e-70 Identity = 113/237 (47.68%), Postives = 168/237 (70.89%), Query Frame = 1
Query: 1 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLI 711
QEVL+K R G+FPS FY+LVYDDHYQG ++E WHV+VQ+RLR+DV++ +GQ +P++L+++GD+++R V +SS PAE F+P+ FQLVPGA+NR ++FR GS+KIH+H+VDLD+ E+V AWL T + PVITK YDV++P+G C K+++++N W TR ++L SSDP +++PR +++ + G++RL+F P +EV LFVND + NEE L+
Sbjct: 2240 QEVLIKYRCGKFPSVGEFYILVYDDHYQGVVHECWHVVVQSRLRLDVNAAVGQSTPSELVIQGDKFARRVMVYSSSPAETFFDPSRPFQLVPGAFNRAAVKFRMKQAGSKKIHIHMVDLDTKELVCAWLVTVNSALPVITKVYDVQVPIGVGCSKKLSFTNQWDRTRRYKLMSSDPAVMKPRNPTVD--------IEPRAIGYMRLYFN-PIDVVGTEEVILFVNDEQDMNEEAFLL 2467
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A7S2HFZ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFZ8_9STRA) HSP 1 Score: 223 bits (568), Expect = 5.150e-69 Identity = 113/242 (46.69%), Postives = 154/242 (63.64%), Query Frame = 1
Query: 1 QEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLICMR 720
QE+ +K ++G FP R FY+L+YDD Y L E WHV V +RLR D+ + LGQ SP +L+VRGD Y R V+A+SS P E+ F PA+ F L P YN++ELR+ P T G R++HVHLVD+ + E+V AW+ T A PP ITK Y V++ +G HK++++ NPW+ RLFRL S+DP ++RP+ + LE F+ + FLR FA EV+L VND E QNEEC I +
Sbjct: 63 QELHLKYWKLGAFPFRADFYVLIYDDRYSARLNEIWHVTVASRLRKDIQATLGQASPMELVVRGDGYRRRVKAYSSEPREIKFLPADVFHLAPQQYNKLELRWTPFGTDGMRRVHVHLVDIQTGELVCAWIVTTVATPPAITKDYQVDVAVGEGSHKKVSFDNPWSRHRLFRLRSTDPNVMRPKTDELEIPPRDRAFIKLYISPFLRPGFA---------EVYLLVNDEEDQNEECFRIVIN 295
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A6G0XXV1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXV1_9STRA) HSP 1 Score: 219 bits (559), Expect = 6.730e-62 Identity = 115/237 (48.52%), Postives = 151/237 (63.71%), Query Frame = 1
Query: 1 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLI 711
QE+ VK RVG++PS FYLL+Y+D Y L+E W + VQA LR+D+ + +GQ +LI++GD R VR +SS P EV F P FQL+P A+NR+EL F + ++I V+LVD+DS E+VG+WL T PV+TK +DV LPLG K+I+Y NPW RLF L SSDP I++PR L + G G GFLRL FA P K+V+LF+ND QNEECLL+
Sbjct: 3054 QEIFVKYRVGEYPSTGEFYLLLYEDMYHARLFEIWRICVQAMLRLDLQASMGQGVRNELIIKGDTMPRRVRCYSSQPHEVQFNPDRIFQLLPHAFNRIELLFCSMEIRIKQIVVNLVDVDSYELVGSWLLNTTTTEPVVTKVFDVTLPLGVPVLKKISYRNPWDDDRLFILRSSDPSIMKPRERKL--------LLPGYGDGFLRLAFA-PHSIACSKKVYLFINDGSDQNEECLLL 3281
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: T0RSH2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSH2_SAPDV) HSP 1 Score: 219 bits (558), Expect = 9.220e-62 Identity = 108/237 (45.57%), Postives = 153/237 (64.56%), Query Frame = 1
Query: 1 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLI 711
QE+ +K RVG +PS FYLL+YDD Y L+E W + +Q+ +R+D+H+ +GQ +LIV+GD R V FSS P E+ F+P+ FQL+P A+NR+E+RF + +++I VH+VD+DS ++VGAWL T P++TK +DV LP G K+I+Y NPW R F L S+DP I++PR L+ + G G G+LRL FA P K+V+LF+ND + QNEECLL
Sbjct: 3386 QEIYIKYRVGDYPSLGVFYLLLYDDMYHARLHEIWRIHIQSMMRLDLHATMGQGVQNELIVKGDAMPRRVSCFSSHPTELQFKPSGIFQLIPHAFNRIEVRFATMQVCAKQIVVHVVDVDSRDLVGAWLLNTTVSEPIVTKVFDVTLPTGVPVLKKISYRNPWDEDRSFVLRSNDPSIMKPREPRLQ--------LQGNGDGYLRLAFA-PHSLPCSKKVYLFINDHQDQNEECLLF 3613
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: W4H6W9_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6W9_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.330e-61 Identity = 109/237 (45.99%), Postives = 155/237 (65.40%), Query Frame = 1
Query: 1 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLI 711
QE+ K RVG++PS FYLL+Y+D Y LYE W + VQ+ LR+D+H+ +GQ +LI++GD R VR +SS PA+V F P FQL+P A+NR+EL + + G+ ++ +++VD+DS E++G+WL A P++TK +DV LPLG K+I+Y NPW + R+F L +SDP I++PR +L S GG GFLRL FA P K+V+LF+ND QNEECLL+
Sbjct: 3377 QEIYFKYRVGEYPSSGEFYLLLYEDMYHAVLYEIWRLCVQSMLRLDLHATMGQGVRNELILKGDTMPRRVRCYSSQPAKVHFNPERIFQLLPHAFNRIELLYCSMDVGALQVLINVVDVDSHELIGSWLLNANTSEPLVTKVFDVTLPLGVPVLKKISYRNPWESDRMFVLRTSDPSIMKPREPTLRLS--------GGSDGFLRLAFA-PYSIPCTKKVYLFINDGSDQNEECLLL 3604
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A7S1XUC6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUC6_9STRA) HSP 1 Score: 217 bits (552), Expect = 5.500e-61 Identity = 115/243 (47.33%), Postives = 155/243 (63.79%), Query Frame = 1
Query: 4 EVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRP--LSTGSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPE-GTNVRKEVFLFVNDSEGQNEECLLICMRG 723
EV +K RV FP FY+LVY D YQ L E WHV V ARLR+D+H+ GQ ADL+VRGD ++R VRA+SS P EVSF+ A F LV G+YNR+ LR+RP LS+ +++I VHL+D D+ ++V W+ATAT PV+T+++DV++ + KRI YSNPW+ R F+L SS+P ++RPR LE V +G++RL +EV LFVND E EEC L+ +RG
Sbjct: 1322 EVWLKYRVPPFPGTGEFYVLVYRDPYQAQLRELWHVHVNARLRLDLHATAGQAVTADLVVRGDSFTRRVRAYSSLPKEVSFDQAGEFALVAGSYNRIGLRYRPTGLSSVTKRISVHLIDADTQQLVCGWIATATTAAPVVTRTFDVDVTVDDEASKRIPYSNPWSRRRAFKLISSNPGLVRPRSARLE--------VEARASGYIRLALNGDAIDAGAVEEVLLFVNDDEDNTEECFLLRLRG 1556
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Match: A0A7S2C1Z8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Z8_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.580e-60 Identity = 110/242 (45.45%), Postives = 153/242 (63.22%), Query Frame = 1
Query: 1 QEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRNVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDLDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWTTTRLFRLASSDPRILRPRYESLEASFFGTKFVAGGGTGFLRLWFAAPEGTNVRKEVFLFVNDSEGQNEECLLICMR 720
QE+L+K ++G FPS FY+L++DD ++ L E WHVIV +RLR DV + LGQ SP + V GD + R+VRA++S E F P++ FQLVP A N + F PL G+RK HVHLVD+D+ ++V AW+ T A PP +TK YDV++ +G A HK+I+Y NPW R ++L SSDP ++RP+ L+ G +F +RL+ A P R EVFL VND GQNE+C + +
Sbjct: 1624 QEILIKYWKLGAFPSMGDFYILIFDDPWRCRLSEIWHVIVASRLRKDVQAKLGQASPIEFTVPGDNHLRHVRAYASNELETRFLPSSVFQLVPNAVNSFKASFTPLGAPGTRKTHVHLVDVDTKQLVAAWILTCVAAPPQVTKDYDVDVRVGEAAHKKISYENPWNRRRSYQLMSSDPNVMRPKVNELQIQPHGREF--------MRLYIA-PLDRAGRVEVFLMVNDERGQNEDCFRVIVN 1856 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10370.363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10370.363.1 >prot_Ecto-sp13_S_contig10370.363.1 ID=prot_Ecto-sp13_S_contig10370.363.1|Name=mRNA_Ecto-sp13_S_contig10370.363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLback to top mRNA from alignment at Ecto-sp13_S_contig10370:612..1937- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10370.363.1 ID=mRNA_Ecto-sp13_S_contig10370.363.1|Name=mRNA_Ecto-sp13_S_contig10370.363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1326bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10370:612..1937- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10370:612..1937- >mRNA_Ecto-sp13_S_contig10370.363.1 ID=mRNA_Ecto-sp13_S_contig10370.363.1|Name=mRNA_Ecto-sp13_S_contig10370.363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10370:612..1937- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |