mRNA_Ecto-sp13_S_contig1036.355.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1036.355.1
Unique NamemRNA_Ecto-sp13_S_contig1036.355.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: D8LTB1_ECTSI (Argininosuccinate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB1_ECTSI)

HSP 1 Score: 879 bits (2270), Expect = 0.000e+0
Identity = 431/439 (98.18%), Postives = 436/439 (99.32%), Query Frame = 1
Query:    1 IRDITMPGDKEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYET 1317
            +RDITMPGDKEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKAL+KTGILTDKETEEIC+GLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTL+HVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFL E+MGFDGI LNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFD VETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYET
Sbjct:    1 MRDITMPGDKEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALRKTGILTDKETEEICQGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLMHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLGEEMGFDGIPLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDAVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYET 439          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A835Z435_9STRA (Argininosuccinate lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z435_9STRA)

HSP 1 Score: 707 bits (1824), Expect = 8.480e-254
Identity = 342/430 (79.53%), Postives = 379/430 (88.14%), Query Frame = 1
Query:   28 KEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYET 1317
            +E KKARLWGGRFRTDTDPVMEKFN+S+ FDR MW+QDI GS+AYAKAL   GILT +E + I +GL+KVR EWAAG F + AGDEDIHTANERRLTE+ GEAGKKLHTGRSRNDQVV D RLWLR Q   AT DM+ LI VCC+ AE H+ VLMAG+THLQPAQPVRFSHWLMSHVAALQRD  RLQDM+PR+NTL LGCGALAGHAFGIDR+ L+ ++GF  ++LNSMDTVCDRDFVAEY+WW+SLTLTHLSQLAEDLII NY +GV+LSDAYSTGSSLMPQKKNPDALELLRGKAGR+TGHL GFL+TLKGLPRTYNKDLQEDKEPLFDTV+TVHDCLRIAAGVVAT+TP  + L   LVPEMLATDLA+YLVRKGVPFRETHHISGAAVKM+EDRG PL +LTP DLRTLH +F DDV  +WNYET
Sbjct:    4 QEPKKARLWGGRFRTDTDPVMEKFNNSINFDRRMWAQDINGSQAYAKALAVAGILTTEEAQSIHDGLEKVREEWAAGSFAIEAGDEDIHTANERRLTELIGEAGKKLHTGRSRNDQVVTDLRLWLRDQAAVATADMTVLIQVCCDMAEKHMGVLMAGYTHLQPAQPVRFSHWLMSHVAALQRDMSRLQDMLPRLNTLPLGCGALAGHAFGIDRDLLKRELGFGDVSLNSMDTVCDRDFVAEYMWWSSLTLTHLSQLAEDLIIMNYIRGVALSDAYSTGSSLMPQKKNPDALELLRGKAGRVTGHLCGFLTTLKGLPRTYNKDLQEDKEPLFDTVDTVHDCLRIAAGVVATLTPLPEGLGKALVPEMLATDLAEYLVRKGVPFRETHHISGAAVKMAEDRGFPLSALTPEDLRTLHPSFADDVAALWNYET 433          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A6V1WR37_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WR37_HETAK)

HSP 1 Score: 647 bits (1670), Expect = 3.420e-230
Identity = 313/427 (73.30%), Postives = 360/427 (84.31%), Query Frame = 1
Query:   37 KKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYET 1317
            KKARLWGGRF  DTDPVMEKFN+S+ FD+ MW QDIEGS+AYAKA  KTGILT +E + I  GLD+V  EWA G F++  GDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  D RLW R       + ++  + V C+ AE H+D+LM GFTHLQPAQPVRFSHW+MSHVAALQRD  RL+D+VPRVNTL LGCGA+AG+AFG+DREFLR+++GF  ++LNSMDTVCDRD+VAEY+WWA+LTLTHLSQLAEDLII NY + V LSDAYSTGSSLMPQKKNPDALELLRGKAGR+ GHL+GF++TLKGLPRTYNKDLQEDKEPLFDTV+TV DC +IA+GV+AT+ P A  L  +LVPEMLATDLA+YLVRKGVPFRETHHISGAAVK++ED+GV L+ LTP DLRTLH  F DDV DVW YET
Sbjct:   14 KKARLWGGRFSGDTDPVMEKFNNSIPFDKIMWKQDIEGSKAYAKANVKTGILTQEEADSIISGLDQVATEWANGTFEIKDGDEDIHTANERRLTELIGSVGGKLHTGRSRNDQVTTDLRLWTREAAAATGRLLAECLGVACQLAEDHLDLLMPGFTHLQPAQPVRFSHWVMSHVAALQRDADRLKDLVPRVNTLPLGCGAIAGNAFGLDREFLRQELGFATVSLNSMDTVCDRDYVAEYMWWATLTLTHLSQLAEDLIILNYKRCVMLSDAYSTGSSLMPQKKNPDALELLRGKAGRVLGHLTGFVTTLKGLPRTYNKDLQEDKEPLFDTVQTVKDCFQIASGVLATLRPVAGKLAEELVPEMLATDLAEYLVRKGVPFRETHHISGAAVKLAEDKGVGLNRLTPDDLRTLHPLFADDVADVWLYET 440          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: W7TLC6_9STRA (Argininosuccinate lyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC6_9STRA)

HSP 1 Score: 587 bits (1513), Expect = 1.190e-206
Identity = 289/424 (68.16%), Postives = 340/424 (80.19%), Query Frame = 1
Query:   46 RLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDV-QDVWNYE 1314
            +LWGGRF    DP+MEKFN+SL FDR MW+ D+ GS AYAKA+   GI+++ E +E+  GL KV+AEWAA  F V  GDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  D RL+LR +  +    +  L+H     A  H+ +LMAGFTHLQPAQP+RFSHW+MSH AAL RD QRL D   R+N L LG GALAGHAFGIDREFLR+++GF G++LNS+D VCDRDF+AE+L WA+LT  HLSQ+AEDLIIYNYTK V LSDAYSTGSSLMPQKKNPDALELLRGKAGR  G  +GFL+TLKGLPR+YNKDLQEDKEPLFDT++T+   L+I  GV AT+TPN + L AQLVPEMLATDLA+YLVRKGVPFRETHHISGAAVK++E+RGVPL SLT  DL+ LH  F +DV ++VW+YE
Sbjct:    5 KLWGGRFSGKVDPIMEKFNNSLVFDRRMWAVDLAGSMAYAKAICLAGIISEAERDELLSGLLKVKAEWAADTFVVKDGDEDIHTANERRLTEIIGPTGGKLHTGRSRNDQVATDVRLYLREETRRLRSLLVELLHTMTSLAREHLPLLMAGFTHLQPAQPIRFSHWVMSHAAALLRDLQRLVDQEQRINVLPLGSGALAGHAFGIDREFLRQELGFAGVSLNSLDAVCDRDFIAEFLSWAALTTVHLSQVAEDLIIYNYTKQVGLSDAYSTGSSLMPQKKNPDALELLRGKAGRALGAATGFLATLKGLPRSYNKDLQEDKEPLFDTIDTMVAVLQITTGVFATLTPNKEALAAQLVPEMLATDLAEYLVRKGVPFRETHHISGAAVKLAEERGVPLSSLTAGDLQALHPCFGEDVAEEVWSYE 428          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: B8C6D4_THAPS (Argininosuccinate lyase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6D4_THAPS)

HSP 1 Score: 569 bits (1467), Expect = 1.650e-199
Identity = 285/438 (65.07%), Postives = 337/438 (76.94%), Query Frame = 1
Query:   16 MPGDKEVKKAR--LWG--GRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAG-EAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYE 1314
            M G +EV  AR  L+G  GRF+  TDP+MEKFN+S+ FD+ MW+QDI GS AYAKA    GILT +E+  I  GL+KV AEWA+  F +  GDEDIHTANERRLTE+ G E G KLHTGRSRNDQV  DTRLW+        +D+ TL+   CE A THIDVLMAG+THLQPAQP+RFSHWLMSH+AA+ RD +RL++++PR N   LG GALAG+AFG+DREFL +++GFDG+T NS+D+VCDRDFV E+L W SL LTHLSQLAEDLII N  K V + DAY+TGSSLMPQKKNPDALELLRGKAG   G   G ++TLKGLPR YNKDLQEDK PLFD V+TV DCL IA GV+ TM PN   L   L PEMLATDLADYLVRKGVPFRETHHISGA V+++E+ GV +D+LT   L+ + + FE DV +VWNYE
Sbjct:    1 MSGKEEVSGARGGLFGAGGRFKGGTDPIMEKFNESIGFDKRMWAQDIRGSIAYAKATTLVGILTPEESSTIISGLEKVHAEWASDTFVIQPGDEDIHTANERRLTEIIGPEVGGKLHTGRSRNDQVATDTRLWIVDAERDILKDIGTLLEGACEFATTHIDVLMAGYTHLQPAQPIRFSHWLMSHMAAITRDAERLRELIPRANMCPLGSGALAGNAFGVDREFLAKELGFDGVTSNSLDSVCDRDFVVEFLMWHSLLLTHLSQLAEDLIINNMLKCVEMDDAYATGSSLMPQKKNPDALELLRGKAGVALGRSVGLMATLKGLPRAYNKDLQEDKVPLFDAVDTVKDCLAIATGVIVTMKPNPKMLMKALCPEMLATDLADYLVRKGVPFRETHHISGACVRLAEESGVSIDTLTLEQLQNIDARFEADVLNVWNYE 438          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A7S3QCM7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCM7_9STRA)

HSP 1 Score: 568 bits (1464), Expect = 4.390e-199
Identity = 275/420 (65.48%), Postives = 327/420 (77.86%), Query Frame = 1
Query:   55 GGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYE 1314
            GGRFR  TDP+MEKFN+SL FD+ MWSQDI GS AYAKA+ K GI+T++E  ++ +GL +V  EWA G F++ AGDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  DTRLW         +D+ TL+ V  E AE HID+LM+G+THLQPAQP+RFSHWLMSH+AA+ RD QRLQD++PR N   LG GALAG+AFG+DREFL +++GFDG+T NS+D  CDRDFV E+L W++L   H SQLAEDLII N  +GV++ DAY+TGSSLMPQKKNPDALELLRGKAG   G   G  +TLKGLPR YNKDLQEDK PLF+ V+TV DCL IA GV+AT+ PN D L   L PEMLATDLADYLVRKGVPFRETHHISGA V+++E+  V +D+LT   L+ + S FE DV  VWNYE
Sbjct:   17 GGRFRGGTDPIMEKFNESLSFDKRMWSQDIRGSIAYAKAIVKVGIITEEEGNQLVDGLKQVGEEWANGTFEIKAGDEDIHTANERRLTEIVGAVGGKLHTGRSRNDQVATDTRLWTVEAERDILKDIGTLLIVGAEFAEQHIDILMSGYTHLQPAQPIRFSHWLMSHLAAIVRDAQRLQDIIPRANMCPLGSGALAGNAFGVDREFLAKELGFDGVTSNSLDATCDRDFVVEFLMWSALLTVHFSQLAEDLIITNLQRGVTIDDAYATGSSLMPQKKNPDALELLRGKAGIALGRAVGLTATLKGLPRAYNKDLQEDKIPLFEAVDTVKDCLAIATGVIATLKPNPDMLMKALCPEMLATDLADYLVRKGVPFRETHHISGACVRLAEESNVSIDTLTLEQLQNIDSRFEKDVMKVWNYE 436          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A7S2XUD4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XUD4_9STRA)

HSP 1 Score: 565 bits (1456), Expect = 8.020e-198
Identity = 270/420 (64.29%), Postives = 330/420 (78.57%), Query Frame = 1
Query:   55 GGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYE 1314
            GGRF+  TDP+MEKFN+S+ FD+ MW QDI GS AYAKA  K GI+T+ E +++  GL+KV  EW  G+F++  GDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  DTR+W         +DM+T +    E A  HIDVLMAG+THLQPAQP+RFSHWLMSH+AA+ RD QRLQ+++PR N   LG GALAG+AFG+DREFL +++GFDG+T NS+D+VCDRDFV E+L WA+L   HLSQLAEDLII N  KGV ++DAYSTGSSLMPQKKNPDALELLRGKAG   G   G ++TLKGLPR YNKDLQEDK PLF++V+TV DCL I  GV+ TM    +NL+  L PEMLATDLADYLVRKGVPFRETHHISGA V+++ED+ V +D+L+ ++L+ + + FE+DV +VWNYE
Sbjct:   20 GGRFKGGTDPIMEKFNESINFDKRMWKQDILGSIAYAKATCKVGIITEDERDQLIAGLEKVSEEWINGDFEIKQGDEDIHTANERRLTEIVGSVGGKLHTGRSRNDQVATDTRMWTVQAERDILKDMATFLEAGAEFAREHIDVLMAGYTHLQPAQPIRFSHWLMSHLAAIMRDAQRLQELIPRANQCPLGSGALAGNAFGVDREFLAKELGFDGVTSNSLDSVCDRDFVVEFLMWAALFEIHLSQLAEDLIITNMLKGVEMNDAYSTGSSLMPQKKNPDALELLRGKAGIALGKAVGLMATLKGLPRAYNKDLQEDKIPLFESVDTVKDCLAIVTGVIVTMKLKPENLKKALCPEMLATDLADYLVRKGVPFRETHHISGACVRLAEDKEVSIDTLSLSELQAIDARFEEDVMEVWNYE 439          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A7S2RZF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZF7_9STRA)

HSP 1 Score: 565 bits (1456), Expect = 1.100e-197
Identity = 272/428 (63.55%), Postives = 339/428 (79.21%), Query Frame = 1
Query:   34 VKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDD-VQDVWNYE 1314
            + +  L  GRFR D DP ME+FN S+ FD+  W  DI GS AYA+A QKTG+LT +E + I  GL++VR EW+AG F++  GDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  D RLW+R++V++  Q+++ L+ V    AE H+D+L AGFTHLQPAQPVRFSHWL+SH AA  RD  R+ D + RVN   LGCGALAGHAFGIDRE L E +GF G+TLNS+DTVCDRDF++E++  ASL + H+SQLAED+I+ N+ K V L+DAY+TGSSLMPQKKNPDALELLRGKAGR+ G+ +GFL+TLKGLPR YNKDLQEDKEPLFDT++T+H CL+IAAGVV+TM PN + L   LVPEMLATDLA++LVRKGVPFRETHHISGA VK++ED GV ++ LT   L++++  F+D+ +  + NYE
Sbjct:   16 MSRGVLATGRFRGDVDPEMERFNASIGFDKVFWDADIRGSIAYARASQKTGLLTSEEMQSIIAGLEQVREEWSAGTFQIKPGDEDIHTANERRLTELIGPVGGKLHTGRSRNDQVATDVRLWMRSEVHKVQQELAGLLEVMANLAEEHVDLLAAGFTHLQPAQPVRFSHWLLSHAAAFIRDADRMADCLKRVNVSPLGCGALAGHAFGIDREALAEDLGFQGVTLNSIDTVCDRDFISEFMSVASLLMVHISQLAEDVILLNWRKSVQLADAYTTGSSLMPQKKNPDALELLRGKAGRVIGNATGFLATLKGLPRAYNKDLQEDKEPLFDTMDTLHSCLKIAAGVVSTMVPNGEKLLQDLVPEMLATDLAEFLVRKGVPFRETHHISGAVVKLAEDTGVSINELTLEQLQSVNPLFDDETISLLKNYE 443          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: W2JWM8_PHYPR (Argininosuccinate lyase n=9 Tax=Phytophthora TaxID=4783 RepID=W2JWM8_PHYPR)

HSP 1 Score: 560 bits (1443), Expect = 5.500e-196
Identity = 272/429 (63.40%), Postives = 339/429 (79.02%), Query Frame = 1
Query:   28 KEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYE 1314
            KE KK  LWGGRFR + DPVM KFN+SL  D+ MW  D++GS+AYA+AL+K+G+LT  E ++I  GLDKV  EWAAG F+   GDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  D RL+L+  +      +  LI    + AE +ID+LM GFTHLQPAQP+RFSHW++SH AAL RD  RL D+  RV+ + LG GALAG++FG+DRE L + +GF  +T NS+D VCDRDF+AE+L+WAS+ + HLSQL+EDLIIYN  K V+++DAYSTGSSLMPQKKNPDALELLRGK+G + G L+GFL TLKGLPR+YNKDLQEDK  LFD V+T+ DCL+IA GV+ATMTP+ D +R+ LV EMLATDLA+YLVRKGVPFRETHH++GAAV+++ED+  PL +LT  +L TLH  FE+DV +VWN++
Sbjct:    6 KEAKK--LWGGRFRGNVDPVMNKFNESLSVDKRMWRVDLDGSQAYARALEKSGVLTTAEADQIVAGLDKVGEEWAAGTFQPKDGDEDIHTANERRLTEIIGAVGGKLHTGRSRNDQVATDVRLYLKRTIVGIQDGLKELIGTANQLAENNIDLLMPGFTHLQPAQPLRFSHWVLSHGAALLRDADRLADLTKRVDYMPLGNGALAGNSFGLDREALAKSLGFANVTPNSLDGVCDRDFIAEFLFWASMLMVHLSQLSEDLIIYNTLKFVTMADAYSTGSSLMPQKKNPDALELLRGKSGTVIGRLNGFLVTLKGLPRSYNKDLQEDKTALFDVVDTIQDCLQIATGVLATMTPHGDKMRSFLVTEMLATDLAEYLVRKGVPFRETHHVAGAAVRLAEDKNKPLSTLTFEELSTLHPKFEEDVLEVWNFD 432          
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Match: A0A5D6YAS0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAS0_9STRA)

HSP 1 Score: 558 bits (1439), Expect = 3.410e-195
Identity = 270/432 (62.50%), Postives = 335/432 (77.55%), Query Frame = 1
Query:   19 PGDKEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYAKALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRLTEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEAAETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNTLALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMSEDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYE 1314
            P     ++ +LWGGRFR   DPVM+KFN+SL  DR MW  D+EGS+AYA+AL+++G+LT  E  EI  GL+ V+ EWA G+F V AGDEDIHTANERRLTE+ G  G KLHTGRSRNDQV  D RL+++  +      +  L+    + AE HI++LM GFTHLQPAQP+RFSHW++SHVAAL RD  RL D+  RV+ L LG GALAG++FG+DR  L E +GF  +T NS+D V DRDF+AE+L+WASL + H SQLAEDLIIYN  K V+++DAYSTGSSLMPQKKNPDALELLRGK G + G L GFL+TLKGLPR+YNKDLQEDK  LFD V+TVHDC++IA GV+ATMTP+ D +RA LV EMLATDLA+YLVRKGVPFRETHH++GAAV+++ED+  PL+ LT  +L +LH  FE DV  VW+++
Sbjct:   11 PAPPAPQEKKLWGGRFRGKVDPVMDKFNESLSVDRRMWRADLEGSQAYAQALERSGVLTAAEAAEIVRGLELVKGEWARGKFAVKAGDEDIHTANERRLTELIGAVGGKLHTGRSRNDQVATDVRLYMKGVIAALQDALKELVGAANQLAENHIELLMPGFTHLQPAQPIRFSHWVLSHVAALLRDADRLTDLTKRVDVLPLGSGALAGNSFGLDRAALAEALGFRQVTPNSLDGVSDRDFIAEFLFWASLLMVHFSQLAEDLIIYNTLKFVTMADAYSTGSSLMPQKKNPDALELLRGKTGTVIGRLGGFLTTLKGLPRSYNKDLQEDKTALFDVVDTVHDCVQIATGVLATMTPHGDRMRAFLVTEMLATDLAEYLVRKGVPFRETHHVAGAAVRLAEDKRKPLNELTFEELASLHDKFERDVLGVWDFD 442          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1036.355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB1_ECTSI0.000e+098.18Argininosuccinate lyase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z435_9STRA8.480e-25479.53Argininosuccinate lyase n=1 Tax=Tribonema minus Ta... [more]
A0A6V1WR37_HETAK3.420e-23073.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TLC6_9STRA1.190e-20668.16Argininosuccinate lyase n=3 Tax=Monodopsidaceae Ta... [more]
B8C6D4_THAPS1.650e-19965.07Argininosuccinate lyase n=1 Tax=Thalassiosira pseu... [more]
A0A7S3QCM7_9STRA4.390e-19965.48Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XUD4_9STRA8.020e-19864.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2RZF7_9STRA1.100e-19763.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W2JWM8_PHYPR5.500e-19663.40Argininosuccinate lyase n=9 Tax=Phytophthora TaxID... [more]
A0A5D6YAS0_9STRA3.410e-19562.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1036contigEcto-sp13_S_contig1036:13257..19411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score873.2
Seed ortholog evalue5e-251
Seed eggNOG ortholog2880.D8LTB1
Preferred nameASL
Model size1341
KEGG rclassRC00445,RC00447
KEGG koko:K01755
KEGG ReactionR01086
KEGG Pathwayko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230
KEGG ModuleM00029,M00844,M00845
Hectar predicted targeting categoryother localisation
GOsGO:0000050,GO:0000053,GO:0001655,GO:0001666,GO:0001822,GO:0001889,GO:0002237,GO:0002376,GO:0003674,GO:0003824,GO:0004056,GO:0005198,GO:0005212,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006536,GO:0006541,GO:0006575,GO:0006591,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0007494,GO:0007517,GO:0007568,GO:0007584,GO:0007610,GO:0007626,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009791,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010243,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0016020,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019627,GO:0019676,GO:0019740,GO:0019752,GO:0019867,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032496,GO:0032501,GO:0032502,GO:0032870,GO:0033554,GO:0033762,GO:0033993,GO:0034097,GO:0034341,GO:0034612,GO:0034641,GO:0035295,GO:0035690,GO:0036293,GO:0036294,GO:0036477,GO:0042221,GO:0042450,GO:0042493,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043204,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046394,GO:0046683,GO:0048471,GO:0048513,GO:0048545,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0051384,GO:0051591,GO:0051704,GO:0051707,GO:0051716,GO:0055123,GO:0060359,GO:0060416,GO:0060538,GO:0060539,GO:0060541,GO:0061008,GO:0061061,GO:0070482,GO:0070852,GO:0070887,GO:0071242,GO:0071310,GO:0071320,GO:0071345,GO:0071346,GO:0071356,GO:0071375,GO:0071377,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071941,GO:0072001,GO:0072350,GO:0097327,GO:0097458,GO:0098588,GO:0098805,GO:0120025,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701
Exons10
EggNOG free text desc.argininosuccinate lyase activity
EggNOG OGsCOG0165@1,KOG1316@2759
Ec32 ortholog descriptionargininosuccinate lyase
Ec32 orthologEc-12_005890.1
EC4.3.2.1
Cds size1326
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1036.355.1prot_Ecto-sp13_S_contig1036.355.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1036 13272..19411 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462526.111656-UTR-Ecto-sp13_S_contig1036:13256..132711681462526.111656-UTR-Ecto-sp13_S_contig1036:13256..13271Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1036 13257..13271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462526.1223154-CDS-Ecto-sp13_S_contig1036:13271..132861681462526.1223154-CDS-Ecto-sp13_S_contig1036:13271..13286Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 13272..13286 +
1681462526.1302946-CDS-Ecto-sp13_S_contig1036:13488..135801681462526.1302946-CDS-Ecto-sp13_S_contig1036:13488..13580Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 13489..13580 +
1681462526.1382887-CDS-Ecto-sp13_S_contig1036:14225..143761681462526.1382887-CDS-Ecto-sp13_S_contig1036:14225..14376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 14226..14376 +
1681462526.146187-CDS-Ecto-sp13_S_contig1036:14743..148451681462526.146187-CDS-Ecto-sp13_S_contig1036:14743..14845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 14744..14845 +
1681462526.1541204-CDS-Ecto-sp13_S_contig1036:15317..154391681462526.1541204-CDS-Ecto-sp13_S_contig1036:15317..15439Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 15318..15439 +
1681462526.1620007-CDS-Ecto-sp13_S_contig1036:15777..158621681462526.1620007-CDS-Ecto-sp13_S_contig1036:15777..15862Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 15778..15862 +
1681462526.171854-CDS-Ecto-sp13_S_contig1036:16227..163621681462526.171854-CDS-Ecto-sp13_S_contig1036:16227..16362Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 16228..16362 +
1681462526.1850116-CDS-Ecto-sp13_S_contig1036:17358..176071681462526.1850116-CDS-Ecto-sp13_S_contig1036:17358..17607Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 17359..17607 +
1681462526.195031-CDS-Ecto-sp13_S_contig1036:18143..183381681462526.195031-CDS-Ecto-sp13_S_contig1036:18143..18338Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 18144..18338 +
1681462526.2049222-CDS-Ecto-sp13_S_contig1036:19231..194111681462526.2049222-CDS-Ecto-sp13_S_contig1036:19231..19411Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1036 19232..19411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1036.355.1

>prot_Ecto-sp13_S_contig1036.355.1 ID=prot_Ecto-sp13_S_contig1036.355.1|Name=mRNA_Ecto-sp13_S_contig1036.355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=442bp
MPGDKEVKKARLWGGRFRTDTDPVMEKFNDSLRFDRCMWSQDIEGSEAYA
KALQKTGILTDKETEEICEGLDKVRAEWAAGEFKVVAGDEDIHTANERRL
TEVAGEAGKKLHTGRSRNDQVVLDTRLWLRAQVNQATQDMSTLIHVCCEA
AETHIDVLMAGFTHLQPAQPVRFSHWLMSHVAALQRDCQRLQDMVPRVNT
LALGCGALAGHAFGIDREFLREKMGFDGITLNSMDTVCDRDFVAEYLWWA
SLTLTHLSQLAEDLIIYNYTKGVSLSDAYSTGSSLMPQKKNPDALELLRG
KAGRITGHLSGFLSTLKGLPRTYNKDLQEDKEPLFDTVETVHDCLRIAAG
VVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMS
EDRGVPLDSLTPADLRTLHSAFEDDVQDVWNYETRCVCVDA*
back to top

mRNA from alignment at Ecto-sp13_S_contig1036:13257..19411+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1036.355.1 ID=mRNA_Ecto-sp13_S_contig1036.355.1|Name=mRNA_Ecto-sp13_S_contig1036.355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1036:13257..19411+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATCAGAGACATCACAATGCCTGGCGATAAGGTGGGTAGTGTGGCACAGAT GATTTGAGTCATCACCGTGGTGCATCAAGCTGTGGAGAGTAAAGTTACGG ATCATGTATTTCGCGCATTTTTTTCATCACCGACCTGTTGATTCTCTGGT TCGTTTAGAGCCGCACAACGCCTTGCTTCACGCTGCTGCTCACCCTGCCC TTGCCTGCGACTGACGATGACAATCCAAGCAGGAAGTCAAGAAAGCGCGG CTGTGGGGCGGTCGATTCCGCACGGACACTGACCCCGTCATGGAGAAGTT CAACGACTCCCTCAGATTCGACAGGTACAACCTTACTGGTACTTACTGGT ACCTCCGTTGGTAACGCGTGCCGTGTGATGTGATTGATCCTTGCGTGAGG GACCATGGCGCACATCATTGCTTGTGATAAGTCCTTACATTGGTGCAACG GCCGGCCAGCTGCATCGCTGTTCATACGTGGGTTTTCGTATTCATAGCGT TAGGTATTATCCGCTCTTGGTTGCCTGCCTCGTTCGCGCTTAGCATGCGT ACATTTTCGTATTTTGTGTTTGGTCGCTCGGCGGCCGATCTTGACGGTTG CGAAGGCAGCATCATCCCACACTCACCTGCAGATACTCCCAACATACCCG ACTCGACTACTGTGGTTATACCTCGAACGGGTTGTCTCTTTGTGTTTGTT TTTATTTTTTCTAAGCCCACCGTATGCAGGAGGTTGCACGGCGAAAAACA GGCAGTTTTTTTCCCCCAGGTACAGCTATAAAGAGTTCAACACAACCCCT CGACTTTTGGAAAATGGTATGCATCTCGAAGTCTTTTCGTGCAAGTGTGT GTGTATATCCTAGCTAGGATATCCTTAAAAGAACAAACTGCTGCTGGATT CATCCACGATTATCAATGTGCTTCATCCGCCGGAGTCCCATCGTCTCGCC CTCAATCGCTGCGGCACAGGTGCATGTGGTCTCAGGACATAGAAGGGAGC GAGGCATACGCGAAGGCCCTCCAGAAGACGGGCATCCTCACCGACAAGGA GACGGAGGAGATCTGCGAGGGGCTGGACAAGGTCCGCGCGGAGTGGGCCG CGGGGGAGTTCAAGGTCGTGGTGAGTTTTCGAACGCGCGGGGTGAAGTGT GTTTAACTCCCGTGGTGTCGTAGGCTTCGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTCTGAGTGCTCTTCTGGAGTCGATCGTTCGTGCAG TAGACGCTCGGTCTGATCCGGCACTCAAGAAACGACCGTGATCGCCATCT AGATATTTTGGGGGCCAGCCGATGCCTGCGAGCCCTAAGTTACATTTCAT CGAGTCGATATTTCCGCCGTCTTTTCTGTGGCGGTTTTGCCTTGTCCTTG CTTTGTAGTCTTCCCGTTGGCTGAAACTGTCCGTGTGCGTGTAGCATGAA ACGTCGGTGCCGCCTCCCCCCGTGCCGCAATCTCAAGGCGGGAGACGAGG ACATCCACACGGCGAACGAGAGGCGACTGACCGAGGTCGCGGGGGAGGCA GGAAAGAAGCTGCACACCGGCCGCAGCCGTAACGACCAGGTGGGCGTCCC CGTCCCTGATGATTGGTCAACGTGCCACCCACCCACAGCCAGCTGCTGCT GCTGCTGCTGCTGCTGCTGCCGATATCTCTGGATAGATCATGAAGCACGC AGAGAGTTCACCAACGGTGTCGATAGTTGGTGTTTTGTCCTGCGGCATTC GTTCGCGGGTCGTTCATTGTTTCCTGCATCCGTGCTTTCGAGTCGGCGGT CGCCCGTTGCTGCGTTCTTGATTTGTTGAGCGGTTGCGACCACACGGACG TGACGTGTCGGTATCCCGTTCTAATCCATTGGACAAGGGCACGGAGGTGC TGCCAGTCTCAACGTTGCCCACCCCGCTCCCCTCCTCCGACGGCTGACTT ATGTCGCGATTCTTCGCTCTTTTGTGTGCAACCCCGGTGTTGCCGCTCTT AGTCTGACCTCACCAAACGCTCTCTTTGCCATGCCTTTCCCGCTGGACAT CGTTTTTTTAGGTCGTGCTGGACACGCGGCTGTGGCTGCGCGCCCAGGTG AACCAGGCGACGCAGGACATGTCTACCCTTATTCACGTCTGCTGCGAGGC GGCGGAGACTCACATCGATGTTCTCATGGCCGGGTGAGCGCATGTTGTTG TTGCTGTAGTTAATTGTTGTTGTTGTCGTGCTGTGCAAATTCGGAAAATC ATCACTCTTTTCCGCTCTTTGCTCGTCAAAGCGGCGACCAGGTTGCGCTG CTGTGTCGCCCGCGGGGTTTTGCAGCTAGTCCCGCTCAGAGAATTTTGCC ACCAATGACAAGGATCCATGATTGTGTGGACATAACGTCTGCTTGATAAC CCCAAGTCACTATAGATGCCGAAAACTGAACGCACTCGTCCCTCACCACA CTTCCTTTCTCTCCATCTTGTTTGGGCGCCGGATGATGCCGCATGGTCTT CTGGATCTACTCTTCTTGTAGCTTCACCCACCTACAGCCGGCCCAGCCCG TGAGGTTTAGCCACTGGCTCATGTCACACGTTGCCGCTCTCCAGCGAGAT TGTCAGGTAAAAATTACATTTCGAGGTTGAGTGTCTCTTCTGGTGCCGTT TTTTGCCTCCCCCACCGTTCCTCGAGGACGCGTGGCCAATACTCCAACCT GTATGGCATTCAAAAACGCGAGTATGTTCCCATCCCTTGTCAACCAGGAG TCGAGATTCGTTCCACACAGGAGGAAGGGGGATACATTTTGCGCGTAGTT GATGCATTGACAGATGATGCATTGACAGAGGTGAAAAAAAGCGAGGTCCC TGATACAAGACGTCAATACATGTCGCCGCCACACCTCTTTTGCGCCATTT CCCTGCTCACCTCACCTCCACGCAATCGCCGCCGCCTCCCCCCACCGACC GGGTCTGCTCGTTGCGTATAGCGCTTGCAAGACATGGTCCCTCGCGTGAA TACTCTGGCGTTGGGGTGCGGCGCTCTGGCCGGGCACGCGTTCGGCATCG ACAGGGAGTTCTTGCGGGAAAAGATGGGTTTCGACGGCATCACCCTCAAC AGCATGGTGAGGGTGATGTGTATGTGCCTTTTGTCACGCTTGACCTGCTC GTGCGTCTCTCGTGCTTTTCGACAAGGTAGCCAGCACACACGGCGTTGTA GAGAAGCTCACATGTGCAGCCTCTATCCCTCTCTCTACCGCACGCCCCCC CCGACACTATCGTCCAGGTACAGGGGGAGTCGATGTTGGCGAGTATGTGA TGTGCCCGAAGGCTTGTATGGTGAGAATGCTGGTGCCATGCATGCTTGTT CGCCCACTAGTTGATGTTGGTGAACAAGGTGTCATAAAAATCGATCGGCA GAGCCTTTGTGAACTTTTTCGATACACAAGCCGGACGATCCACCCCACCT AACTTGCACTTGACCTGAAGACTATACTTGCGATCTTGGAGACAAAAGGT GAGAACAGCAGATCATGTTGCGACCAGGTGTCCTTGTGTTATACATCAAG TTTCGCTGTTTCGTCCTTCATGGGTGTGAGGGTTACTGCATAAGCACCTA TTGAGCAAACGGAGGAGACGGTCTAGTCGAACGAACCACACCATGCCCCC GCTGTCCTGCGTCTCCACTAACGCCAAAAAGATTGAAGCACAAAGCGCAA AACCAGCGGAAACGTACCCGCGGCGAGTCGTTCAGCCAACTTCAACGGGG TACGCGGCAAGCAAGCAAACAGGCAGGTAGACAAACAGGCTGAAAAGACA AGCAGATAGACAGGCAGACAAAATACAGCGAACAAACAAATAAGAAGGCG AGCGAACCATCCTGACACGACCCGACTCAACCGCCCCCCCCCCCCCCCCC CCCCCCCCAACCACCCCACCGCCGCGACACCTGCGCGGGGGCGGGGTGGT TGTGGGCGGCCGGCGCCCCCCCCCTCCCCCCCCNNNNNNNNNNAAAAAAG AAGATAAACAAACGGAAAAAAAAAAGAGAACAAAAAAAAAAAAAGGCGAG CAAACCACCCCGCCCCCCCCCCCCCCAACCCCCCCCCCCCCCCCCCAAAA AGGACACCGTGTGCGACCGAGACTTCGTGGCGGAGTACCTCTGGTGGGCG TCCCTGACGCTGACCCACCTCTCCCAGCTGGCGGAGGACCTGATCATCTA CAACTACACCAAGGGCGTCTCCCTCTCGGACGCGTACAGCACGGGCAGCA GCCTCATGCCGCAAAAGAAGAACCCGGACGCGCTGGAGCTGCTTCGTGGC AAGGCCGGTAGGATCACGGGGCACCTCTCGGGGTTCCTCTCTACCCTTAA GGTACGGTTGGTGGTGGTGATGGTTGCCCTGCTGGTGGTGGTGGTGGTGA TGTTGTTCGGGATGCTTATACTGCTCGTGCTTTAGGTGCGCAGCCGCGTA GGAGGTGATGCATGCGGCCCGTACGTTTTCTTGTCTGGCCCCAGCCGATG ACTCGCGAAGAAACGTCGGGTCGGTCGTGTCCCGACGAAAACTGCAAACA ACCCCGCGTCCTTGTTGAAAAGTATCATCACGTCATCCCCCACCTCCGCC CACCCCTCACCGCTTCCTGACCCCCGCACCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTACTACTACTATTACTAACTTCCGCG TCCTCACGTACACAACAAGTACCTCTACACAAAACAATGTTGTGTGCTGT CCTCCCTCCCGCCCTCCCTCACCCGTCTCCCAGGGTCTCTGCATGCTACC TCCCGCGTCCTCACGTACACTATTACCTCTACACAAAACAATACTGTGTG ATGTGCTCCTTCACGCCCTCCCTCACCCGTCTCCCAGGGTCTCCCACGCA CGTACAACAAGGACCTGCAGGAGGACAAGGAGCCCCTCTTCGACACGGTC GAGACCGTGCACGACTGCCTCCGCATCGCTGCCGGGGTTGTGGCCACCAT GACGCCCAACGCCGACAACCTCCGGGCGCAGCTCGTGCCCGAGATGCTGG CGACGGACCTCGCCGACTACCTTGTTCGCAAGGTATGTGTGTGTGTGCGA TATTGGGTTGGGGGTTAGGGAGAGTTTTGGACAAGGAAGCACTCGCTCTC TTTGGTAGGGGGTAGACGAGAGAGAGAGAGGATGTGAAGTTGGCGATGCT GCCGCCGAATTGCGGGCGAACGCATAGGTGTGCGATGTGGCTTCAGATAT CGCTTTTCCCACAACCACGAAGGGTGCTATCGAGGAACACGACGGACATG TGCAAGGAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGATGCG GTCTGTCACAAACGACCCTTTCGGGCGTTGGCAGCCTCGAATGGTTGTAG AGGAATCGAGCTTTTAACCTTGGATCGCACACATGTGCGTGCGCCCGCAC TCGTACGGTGCACCTCGTTAGTGGTGCCGGGTTGCACACAAAGAGGAAGC AGCCTCCTTCCTGCCTGTCTCAGCTGCACCGCGTAAAGGTTGCTGATACA CAACATGGCATGCTTTTATTTTCTTCTTGGTGTGGTGCGGTCAATTCTCG GAAGATTCAACAGCCCCCGTCCTCCTGGCTATGCTACCGTATTGATACTG TAACGCTTTTTGATGTGCATGCCATGTCACTCTTGGCGCTTACGACCGTG CAAATGACCCCATGGCCACCTTGCGACCGTCCCACCCCTTACCCCTACCA CGTCGTCACCAGCACGACGTCACCAATCATCATTTTCACCGCTCACAAAC TACAGCAGTACACTCAAGAAACAATATTTATATTCTCGAGTTCTTCTGTC TTGGTAGCCTTTTTTTTTTACATGTATTTTTTTTTTTCAGTTTTGGGGAC TAAGTAATATCATGACCACGCCCACAACACTATACCTTTGCTCCACACCA CCATCGTCACCACCGTAACACACAGGGGGTACCTTTCCGCGAGACGCACC ACATCTCTGGGGCGGCGGTGAAGATGTCCGAGGACCGGGGCGTGCCTCTG GACTCGCTCACCCCGGCGGACCTCCGCACCCTCCACAGCGCCTTCGAGGA CGACGTCCAGGACGTCTGGAACTACGAGACCAGGTGTGTGTGTGTGGATG CGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1036:13257..19411+

>mRNA_Ecto-sp13_S_contig1036.355.1 ID=mRNA_Ecto-sp13_S_contig1036.355.1|Name=mRNA_Ecto-sp13_S_contig1036.355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1326bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1036:13257..19411+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTGGCGATAAGGAAGTCAAGAAAGCGCGGCTGTGGGGCGGTCGATT
CCGCACGGACACTGACCCCGTCATGGAGAAGTTCAACGACTCCCTCAGAT
TCGACAGGTGCATGTGGTCTCAGGACATAGAAGGGAGCGAGGCATACGCG
AAGGCCCTCCAGAAGACGGGCATCCTCACCGACAAGGAGACGGAGGAGAT
CTGCGAGGGGCTGGACAAGGTCCGCGCGGAGTGGGCCGCGGGGGAGTTCA
AGGTCGTGGCGGGAGACGAGGACATCCACACGGCGAACGAGAGGCGACTG
ACCGAGGTCGCGGGGGAGGCAGGAAAGAAGCTGCACACCGGCCGCAGCCG
TAACGACCAGGTCGTGCTGGACACGCGGCTGTGGCTGCGCGCCCAGGTGA
ACCAGGCGACGCAGGACATGTCTACCCTTATTCACGTCTGCTGCGAGGCG
GCGGAGACTCACATCGATGTTCTCATGGCCGGCTTCACCCACCTACAGCC
GGCCCAGCCCGTGAGGTTTAGCCACTGGCTCATGTCACACGTTGCCGCTC
TCCAGCGAGATTGTCAGCGCTTGCAAGACATGGTCCCTCGCGTGAATACT
CTGGCGTTGGGGTGCGGCGCTCTGGCCGGGCACGCGTTCGGCATCGACAG
GGAGTTCTTGCGGGAAAAGATGGGTTTCGACGGCATCACCCTCAACAGCA
TGGACACCGTGTGCGACCGAGACTTCGTGGCGGAGTACCTCTGGTGGGCG
TCCCTGACGCTGACCCACCTCTCCCAGCTGGCGGAGGACCTGATCATCTA
CAACTACACCAAGGGCGTCTCCCTCTCGGACGCGTACAGCACGGGCAGCA
GCCTCATGCCGCAAAAGAAGAACCCGGACGCGCTGGAGCTGCTTCGTGGC
AAGGCCGGTAGGATCACGGGGCACCTCTCGGGGTTCCTCTCTACCCTTAA
GGGTCTCCCACGCACGTACAACAAGGACCTGCAGGAGGACAAGGAGCCCC
TCTTCGACACGGTCGAGACCGTGCACGACTGCCTCCGCATCGCTGCCGGG
GTTGTGGCCACCATGACGCCCAACGCCGACAACCTCCGGGCGCAGCTCGT
GCCCGAGATGCTGGCGACGGACCTCGCCGACTACCTTGTTCGCAAGGGGG
TACCTTTCCGCGAGACGCACCACATCTCTGGGGCGGCGGTGAAGATGTCC
GAGGACCGGGGCGTGCCTCTGGACTCGCTCACCCCGGCGGACCTCCGCAC
CCTCCACAGCGCCTTCGAGGACGACGTCCAGGACGTCTGGAACTACGAGA
CCAGGTGTGTGTGTGTGGATGCGTGA
back to top