mRNA_Ecto-sp13_S_contig10341.339.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: D7FL16_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL16_ECTSI) HSP 1 Score: 966 bits (2496), Expect = 0.000e+0 Identity = 494/530 (93.21%), Postives = 512/530 (96.60%), Query Frame = 1
Query: 202 ATAPEMLFSGVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFRDPGLMETPAPTSDGDSMPLPSSEEWYEEHAGWLAVGAALTAVAAGGLVSVLIANSGCACCIVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVLRATAEREATGDGQRRGTKGLKPMATREGSEENILFDPDPRHVAMCPHCEIVFCAPCDIRDRKRMFRFLFENSPNGVKKEETRAAVNPSAVEFGMDEAGSA 1791
A APEMLFSG+IETADGAWEAVYNPDGTHVYLTGK+TNSIV+F+VDPSDGRLTMVGESAMD+NSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLS+SARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFA DLDTCGLTYRS+VT SLVAPAGMSVSPDGSLLYATDSAMSGGAL LFGTDPDTGELELLQAITNGAA GYELGGAVSVAVSPSGKDVYVAS YPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGAS++TIQEGD+GD+TGLAGARSISVSPDGGTALVVSSVTGTIAVFRD LMETPAPTSDG+SMP PSSEEWYEEHAGWL VGAALTAVAAGGLVSVLIANSGCAC VGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDV RA AEREATGDGQRRGTKGLKPMATR G EENI+FDPDP+HVAMCPHCEIVFCAPCDIRDRKRMF FLFENSPNGV++EETRAAV+PSA EFG+DEAGSA
Sbjct: 364 AIAPEMLFSGLIETADGAWEAVYNPDGTHVYLTGKETNSIVVFDVDPSDGRLTMVGESAMDNNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSFSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAADLDTCGLTYRSNVTFSLVAPAGMSVSPDGSLLYATDSAMSGGALALFGTDPDTGELELLQAITNGAAAGYELGGAVSVAVSPSGKDVYVASYYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASIDTIQEGDEGDITGLAGARSISVSPDGGTALVVSSVTGTIAVFRDTALMETPAPTSDGESMPSPSSEEWYEEHAGWLGVGAALTAVAAGGLVSVLIANSGCACSFVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVRRAKAEREATGDGQRRGTKGLKPMATRGGCEENIMFDPDPKHVAMCPHCEIVFCAPCDIRDRKRMFPFLFENSPNGVEEEETRAAVDPSAEEFGIDEAGSA 893
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: D7FP51_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP51_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 1.870e-154 Identity = 285/547 (52.10%), Postives = 340/547 (62.16%), Query Frame = 1
Query: 208 APEMLFSGVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITN-------------GAAVGYELG--GAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFRDPGLME------TPAPTSDG-DSMPLPSSEEWYEEHAGWLAVGAALTAVAAGGLVSVLIANSGCACCIVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVLRATAEREATGDGQRRGTKGLKPMATREGSEENILFDPDPRHVAMCPHCEIVFCAPCDIRDRKRMFRFLFENSPNGVKKEETRAAVNPSAVEFGMDEA 1782
AP++LF V++ DGAWEAVY PDGTHVYLTGK+++SIV FEVD SDG LTMVG+ M++ AG LDGPT L SPDGRCLFV A G++SLTSL I G G+G+L+Y+ VS ALA+ WDVV S GDHVYVSSPACGCI+TFA DL+TCGLTY S+VT SLV+P GM+VSPDG LY TDS SGGAL+LF DP TG+L LLQ I++ GA +LG GA V V+P V VASN L V + E +E +D TI EGD G + GL RSI+VSPDG TALVVSS+ GTIA+FRD + TPAPTS+G D P+ +EWYE A WL +G A VAA GLV LIAN CC + + K +V CPAC KK++VKRKGL R CSCD LRA AE +A GQ G G +LF PDPR++A CPHC V CAPCD+RD+K F FL EN+P G E A +PSA+E GMD+A
Sbjct: 34 APDVLFVEVMDATDGAWEAVYTPDGTHVYLTGKESDSIVAFEVDSSDGSLTMVGDFDMNTGGTG-AGTLDGPTVLTPSPDGRCLFVVAAGNNSLTSLSID------GAGSGNLTYAGTVSGAALAEAWDVVASPLLGDHVYVSSPACGCIITFAADLETCGLTYVSNVTESLVSPTGMAVSPDGLFLYGTDSVASGGALMLFSRDPQTGDLALLQTISDSEGTGELQEVELEGATTPTQLGLDGASLVTVNPDNSRVLVASNANDTFWVLNVGDD--ECAVLELQD---------------TIAEGDGGHIGGLTDIRSIAVSPDGRTALVVSSMDGTIALFRDTITTDPSPSAPTPAPTSEGEDPSQPPNEDEWYERQAIWLGLGGAAATVAAAGLVWFLIANG---CCGIVILMVRGKTKVKCPACDKKMEVKRKGLGHRTTCSCDKLRAKAEADA---GQNGGQSG------------KVLFHPDPRYIATCPHCGNVSCAPCDVRDKKATFPFLLENNPKGG---EEMGAADPSAIEVGMDDA 535
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A090AEK5_9GAMM (Uncharacterized protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AEK5_9GAMM) HSP 1 Score: 92.8 bits (229), Expect = 9.710e-16 Identity = 112/391 (28.64%), Postives = 165/391 (42.20%), Query Frame = 1
Query: 229 GVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGM------SVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAA----VGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGEL--QAVEWEDNATPTGL--------SMDGASM-------------------------ETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLMETPAPTSDGDS 1239
G I GA +PDG VY+ ++I +F +P G+L + + D S + L G + S DG+ ++VA G +++ S G L++ + D LA T V VS G VYV+ + + A D LT++ + G+ +VS DG +Y + S A+ +F DP G+L Q + NG + V L GA SV VS + VYVAS A+ L D S+G L Q V + A GL S DG S+ + +++GD G V GL+GA S++VS DG + V SS+ +AV R+P GL++ DGDS
Sbjct: 52 GQINGLKGASSVTMSPDGKFVYVVSSSNSAITVFARNPVSGKLVFI-QVIQDDISGVDG--LAGAELVTISADGKSVYVAGTGDNAVAVFSRNLSS-------GQLTFQQVLKDGDSGIVDGLAGTQSVTVSA-DGKSVYVAGTSDDAVAVLARDPGNGQLTFQQVLKDGQAGVDGLDGAVSVTVSADGKSVYV--AGYSDNAVAMFSRDPGNGQLTFQQVLKNGDSGMIGVVDGLSGADSVTVSADDQSVYVASFLDNAVAVLARDPSTGLLIFQQVLKDGQAGVDGLASADSVTVSADGKSLYVAGSFDKAVAVFSRDPINGHLTFQQVLKDGDSGVVDGLSGAESVTVSADGKSVYVASSLDNAVAVLARNPNTGLLDFQQVLKDGDS 429
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A1W9X2S2_9GAMM (Uncharacterized protein n=1 Tax=Beggiatoa sp. 4572_84 TaxID=1972449 RepID=A0A1W9X2S2_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 6.500e-15 Identity = 99/346 (28.61%), Postives = 141/346 (40.75%), Query Frame = 1
Query: 250 GAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAV------------GSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSV------TSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVG-----YELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLME 1209
GA + G H+Y TG N++ +F D + G LT + NS L GP A+A SPD + ++VA+ S LT I + G EG S A SD +YV+ I+ F D++T LT+ L ++VS D +Y T + A+ +F +P GEL + A NG L GA +V VSP+ VYV SN ALV + S+GEL ++T QEG + ++ GL+GAR +++ PDG V +AVF RD GL+E
Sbjct: 17 GANALALSAQGNHLYATGFFDNAVAVFSRDTNTGVLTF---QQVIKNSDIGNNGLQGPNAIAVSPDNKHVYVASTTDNAIVVFTRDPSSGQLTLAEIQQNGVNGVEGLAGASAIAISSDN---------------QRLYVTGTRDNAIVVFERDVNTGTLTFLQKQQDGVNNVDGLAGATAVAVSKDNLFIYVTGK--NDNAVAVFSRNPQQGELAFVAAYKNGVQPDDGPTITGLSGAYAVTVSPNNNHVYVVSNTDNALVAFSRNASTGEL------------------TYLQTHQEGTN-NINGLSGARGVAIRPDGSNVYVAGVNDDALAVFNRDTATGLLE 323
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534SHE9_9DELT (Lactonase family protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534SHE9_9DELT) HSP 1 Score: 87.0 bits (214), Expect = 1.200e-14 Identity = 84/265 (31.70%), Postives = 121/265 (45.66%), Query Frame = 1
Query: 265 VYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTA------LADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY-------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGG---ALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVE 1011
V +PDG HVY+ K +++ +F D G LT V ++ + LDG +A SPDG ++VA SL TG+L+Y D + L V VS P G HVY + + F D T LT+ ++ + L +SVSPDG+ LY ++GG AL++F +P+TG L +Q + +G V L GA +VAVSP G V+V + AL D ++G L VE
Sbjct: 109 VVSPDGVHVYVASKTGDALAVFSRDVDTGALTFV---QAKNDGVGKVNGLDGAEGIAISPDGAHVYVAGRNDDSLAVFSRD-------AATGALTYVEIQRDGSAGVVQGLLGAKAVAVS-PDGAHVYAAGSLENAVAVFGRDAATGKLTFIEVQREGQNGIVG-LDRARALSVSPDGANLY-----VAGGYDDALVVFDRNPETGMLTSVQLLEDGVGVVNGLNGADAVAVSPDGTHVFVTGSVDNALAVFERDPATGTLTYVE 356
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A496VDZ9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VDZ9_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 1.520e-14 Identity = 99/346 (28.61%), Postives = 141/346 (40.75%), Query Frame = 1
Query: 250 GAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAV------------GSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSV------TSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVG-----YELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLME 1209
GA + G H+Y TG N++ +F D + G LT + NS L GP A+A SPD + ++VA+ S LT I + G EG S A SD +YV+ I+ F D++T LT+ L ++VS D +Y T + A+ +F +P GEL + A NG L GA +V VSP+ VYV SN ALV + S+GEL ++T QEG + ++ GL+GAR +++ PDG V +AVF RD GL+E
Sbjct: 55 GANALALSAQGNHLYATGFFDNAVAVFSRDTNTGVLTF---QQVIKNSDIGNNGLQGPNAIAVSPDNKHVYVASTTDNAIVVFTRDPSSGQLTLAEIQQNGVNGVEGLAGASAIAISSDN---------------QRLYVTGTRDNAIVVFERDVNTGTLTFLQKQQDGVNNVDGLAGATAVAVSKDNLFIYVTGK--NDNAVAVFSRNPQQGELAFVAAYKNGVQPDDGPTITGLSGAYAVTVSPNNNHVYVVSNTDNALVAFSRNASTGEL------------------TYLQTHQEGTN-NINGLSGARGVAIRPDGSNVYVAGVNDDALAVFNRDTATGLLE 361
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534Z3G1_9DELT (Disintegrin domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Z3G1_9DELT) HSP 1 Score: 80.5 bits (197), Expect = 4.480e-12 Identity = 83/265 (31.32%), Postives = 119/265 (44.91%), Query Frame = 1
Query: 265 VYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY-------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGG---ALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVE 1011
V +PDG HVY+ K +++ +F D G LT V ++ + LDG +A SPDG ++VA SL TG+L+Y D L V VS P G HVY + + F D T LT+ ++ V A A ++VS DG+ LY ++GG AL++F +P+TG L +Q + +G L GA +VAVSP G V+V + AL D ++G L VE
Sbjct: 109 VVSPDGVHVYVASKTGDALAVFSRDVDTGALTFV---QAKNDGVGKVNGLDGAEGIAISPDGAHVYVAGRNDDSLAVFSRD-------AATGALTYVEIQRDGYAGVVQGLLGAKAVAVS-PDGAHVYAAGSLENAVAVFGRDAATGKLTFIEVQREGQNGVLGLFGAKA-VTVSLDGANLY-----VAGGYDDALVVFDRNPETGMLTSVQLLEDGVGGVNGLNGADAVAVSPDGTHVFVTGSVDNALAVFERDPATGTLTYVE 356
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534YZ16_9DELT (Uncharacterized protein n=4 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YZ16_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 4.680e-10 Identity = 78/270 (28.89%), Postives = 123/270 (45.56%), Query Frame = 1
Query: 412 LDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTA-----LADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF 1188
L+G + SPDG+ ++VA ++L TG+L++ DT L VV+S P G HVYV+S ++ F+ D + L++ + L ++VSPDG +Y + + A+ +F D +G L ++ +G L GA SVAVSP G VY A + A+ D ++G+L VE + +EG +G +TGLAGAR++++SPDG V + +AVF
Sbjct: 47 LNGAYGVTVSPDGKQVYVAGELDNALAVFSRDPA-------TGALTFVEVEHDTVGGVAGLKGAHAVVLS-PDGAHVYVASSVADAVVVFSRDAASGALSFVETKRDNKGKVNGLNGAESVAVSPDGLHVYV--AGRNDNAIAVFERDVASGMLTFVEEQRSGTGGVEGLLGAKSVAVSPDGAHVYAAGSLDDAVAVFGRDATTGKLTFVEAQ------------------REGANG-ITGLAGARAVTLSPDGADLYVAGATDDALAVF 287
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: K9EVA1_9CYAN (Uncharacterized protein n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9EVA1_9CYAN) HSP 1 Score: 72.4 bits (176), Expect = 1.670e-9 Identity = 82/269 (30.48%), Postives = 121/269 (44.98%), Query Frame = 1
Query: 412 LDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDT----ALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVT------SSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF 1188
L G + + SPDG +FV + +SLT + + G+L++S + D+ L + V VS P G V+V+S +M F+ D D LT + + ++L ++VSPDGS ++ S A+ +F D +TG L QAI +G EL GA VA+SP G V+V S A+ D +SG L + I++G +G L GA + VSPDG V S+V I VF
Sbjct: 200 LFGTSGVTVSPDGTQVFVTSAVDASLTVFNL--------DAFGNLNFSQVIRDSFEVEELFGAFGVTVS-PDGSQVFVASTGDHSLMVFSRDGDG-NLTEQQLLKDGRDGINTLEGAIDVAVSPDGSQVFVVSLVDS--AITVFDRD-ETGNLTFRQAIKDGIGGAAELFGASGVAISPDGSQVFVTSRDDAAITVFNRD-ASGNL------------------TFRQAIKDGQNG-AENLFGASGVVVSPDGNQVYVTSAVDAAITVF 435
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A497E8U4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A497E8U4_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 4.900e-9 Identity = 97/354 (27.40%), Postives = 152/354 (42.94%), Query Frame = 1
Query: 214 EMLFSGV-IETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVD-----PSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD-------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY---------RSSVT-SSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELE-----LLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFR 1191
E GV ++ GA +PDG +Y+ N + +F D P G LT V E+ +D A L G +A SPDG ++V + S S+T + + D TG L +S ++ AL D+V + P G H+YV++ I F+ D + LT+ + SVT + L +++SP G LYA +++ A+++F + DTG E L+ +G + L GA ++ +SP G +YVA A+V D + G L VE L+ DG V GL G ++++PDG L + + VF
Sbjct: 248 EQEIDGVTLDGLAGASGLAVSPDGRDLYVAAVADNGVAVFNRDAEPTSPDFGNLTFV-EAHIDG---APFNGLLGAIDVAVSPDGLHVYVVSKESDSIT-VYVRD------PATGMLDFSQHKTEGSDDVPLIALNGARDLVFT-PDGIHLYVAAQDADAITVFSRDPASGHLTFVDVVRDLDMQGSVTVNGLNFVRSLALSPGGVYLYAV--SLADDAIVVFERNRDTGSAEYGHLTFLETYRDGEGLIDGLDGATAITISPDGAYLYVAGLNDDAVVVFRRDWTDGSLTMVE---------LAQDGMPG----------VEGLDGVSGLAITPDGARLLATAVNDNALTVFE 568 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10341.339.1 >prot_Ecto-sp13_S_contig10341.339.1 ID=prot_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=597bp TPAPLTPSPTTPTPSTPAPTTLAPTPATPAPLTPSPMTSAPSTPAPTTLAback to top mRNA from alignment at Ecto-sp13_S_contig10341:4..3632+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10341.339.1 ID=mRNA_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10341:4..3632+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10341:4..3632+ >mRNA_Ecto-sp13_S_contig10341.339.1 ID=mRNA_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1791bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10341:4..3632+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |