mRNA_Ecto-sp13_S_contig10341.339.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10341.339.1
Unique NamemRNA_Ecto-sp13_S_contig10341.339.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: D7FL16_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL16_ECTSI)

HSP 1 Score: 966 bits (2496), Expect = 0.000e+0
Identity = 494/530 (93.21%), Postives = 512/530 (96.60%), Query Frame = 1
Query:  202 ATAPEMLFSGVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFRDPGLMETPAPTSDGDSMPLPSSEEWYEEHAGWLAVGAALTAVAAGGLVSVLIANSGCACCIVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVLRATAEREATGDGQRRGTKGLKPMATREGSEENILFDPDPRHVAMCPHCEIVFCAPCDIRDRKRMFRFLFENSPNGVKKEETRAAVNPSAVEFGMDEAGSA 1791
            A APEMLFSG+IETADGAWEAVYNPDGTHVYLTGK+TNSIV+F+VDPSDGRLTMVGESAMD+NSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLS+SARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFA DLDTCGLTYRS+VT SLVAPAGMSVSPDGSLLYATDSAMSGGAL LFGTDPDTGELELLQAITNGAA GYELGGAVSVAVSPSGKDVYVAS YPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGAS++TIQEGD+GD+TGLAGARSISVSPDGGTALVVSSVTGTIAVFRD  LMETPAPTSDG+SMP PSSEEWYEEHAGWL VGAALTAVAAGGLVSVLIANSGCAC  VGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDV RA AEREATGDGQRRGTKGLKPMATR G EENI+FDPDP+HVAMCPHCEIVFCAPCDIRDRKRMF FLFENSPNGV++EETRAAV+PSA EFG+DEAGSA
Sbjct:  364 AIAPEMLFSGLIETADGAWEAVYNPDGTHVYLTGKETNSIVVFDVDPSDGRLTMVGESAMDNNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSFSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAADLDTCGLTYRSNVTFSLVAPAGMSVSPDGSLLYATDSAMSGGALALFGTDPDTGELELLQAITNGAAAGYELGGAVSVAVSPSGKDVYVASYYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASIDTIQEGDEGDITGLAGARSISVSPDGGTALVVSSVTGTIAVFRDTALMETPAPTSDGESMPSPSSEEWYEEHAGWLGVGAALTAVAAGGLVSVLIANSGCACSFVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVRRAKAEREATGDGQRRGTKGLKPMATRGGCEENIMFDPDPKHVAMCPHCEIVFCAPCDIRDRKRMFPFLFENSPNGVEEEETRAAVDPSAEEFGIDEAGSA 893          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: D7FP51_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP51_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 1.870e-154
Identity = 285/547 (52.10%), Postives = 340/547 (62.16%), Query Frame = 1
Query:  208 APEMLFSGVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITN-------------GAAVGYELG--GAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFRDPGLME------TPAPTSDG-DSMPLPSSEEWYEEHAGWLAVGAALTAVAAGGLVSVLIANSGCACCIVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVLRATAEREATGDGQRRGTKGLKPMATREGSEENILFDPDPRHVAMCPHCEIVFCAPCDIRDRKRMFRFLFENSPNGVKKEETRAAVNPSAVEFGMDEA 1782
            AP++LF  V++  DGAWEAVY PDGTHVYLTGK+++SIV FEVD SDG LTMVG+  M++     AG LDGPT L  SPDGRCLFV A G++SLTSL I       G G+G+L+Y+  VS  ALA+ WDVV S   GDHVYVSSPACGCI+TFA DL+TCGLTY S+VT SLV+P GM+VSPDG  LY TDS  SGGAL+LF  DP TG+L LLQ I++             GA    +LG  GA  V V+P    V VASN       L V +   E   +E +D               TI EGD G + GL   RSI+VSPDG TALVVSS+ GTIA+FRD    +      TPAPTS+G D    P+ +EWYE  A WL +G A   VAA GLV  LIAN    CC +   +   K +V CPAC KK++VKRKGL  R  CSCD LRA AE +A   GQ  G  G             +LF PDPR++A CPHC  V CAPCD+RD+K  F FL EN+P G    E   A +PSA+E GMD+A
Sbjct:   34 APDVLFVEVMDATDGAWEAVYTPDGTHVYLTGKESDSIVAFEVDSSDGSLTMVGDFDMNTGGTG-AGTLDGPTVLTPSPDGRCLFVVAAGNNSLTSLSID------GAGSGNLTYAGTVSGAALAEAWDVVASPLLGDHVYVSSPACGCIITFAADLETCGLTYVSNVTESLVSPTGMAVSPDGLFLYGTDSVASGGALMLFSRDPQTGDLALLQTISDSEGTGELQEVELEGATTPTQLGLDGASLVTVNPDNSRVLVASNANDTFWVLNVGDD--ECAVLELQD---------------TIAEGDGGHIGGLTDIRSIAVSPDGRTALVVSSMDGTIALFRDTITTDPSPSAPTPAPTSEGEDPSQPPNEDEWYERQAIWLGLGGAAATVAAAGLVWFLIANG---CCGIVILMVRGKTKVKCPACDKKMEVKRKGLGHRTTCSCDKLRAKAEADA---GQNGGQSG------------KVLFHPDPRYIATCPHCGNVSCAPCDVRDKKATFPFLLENNPKGG---EEMGAADPSAIEVGMDDA 535          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A090AEK5_9GAMM (Uncharacterized protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AEK5_9GAMM)

HSP 1 Score: 92.8 bits (229), Expect = 9.710e-16
Identity = 112/391 (28.64%), Postives = 165/391 (42.20%), Query Frame = 1
Query:  229 GVIETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGM------SVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAA----VGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGEL--QAVEWEDNATPTGL--------SMDGASM-------------------------ETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLMETPAPTSDGDS 1239
            G I    GA     +PDG  VY+     ++I +F  +P  G+L  + +   D  S  +   L G   +  S DG+ ++VA  G +++        S       G L++   + D        LA T  V VS   G  VYV+  +   +   A D     LT++  +        G+      +VS DG  +Y   +  S  A+ +F  DP  G+L   Q + NG +    V   L GA SV VS   + VYVAS    A+  L  D S+G L  Q V  +  A   GL        S DG S+                         + +++GD G V GL+GA S++VS DG +  V SS+   +AV  R+P  GL++      DGDS
Sbjct:   52 GQINGLKGASSVTMSPDGKFVYVVSSSNSAITVFARNPVSGKLVFI-QVIQDDISGVDG--LAGAELVTISADGKSVYVAGTGDNAVAVFSRNLSS-------GQLTFQQVLKDGDSGIVDGLAGTQSVTVSA-DGKSVYVAGTSDDAVAVLARDPGNGQLTFQQVLKDGQAGVDGLDGAVSVTVSADGKSVYV--AGYSDNAVAMFSRDPGNGQLTFQQVLKNGDSGMIGVVDGLSGADSVTVSADDQSVYVASFLDNAVAVLARDPSTGLLIFQQVLKDGQAGVDGLASADSVTVSADGKSLYVAGSFDKAVAVFSRDPINGHLTFQQVLKDGDSGVVDGLSGAESVTVSADGKSVYVASSLDNAVAVLARNPNTGLLDFQQVLKDGDS 429          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A1W9X2S2_9GAMM (Uncharacterized protein n=1 Tax=Beggiatoa sp. 4572_84 TaxID=1972449 RepID=A0A1W9X2S2_9GAMM)

HSP 1 Score: 89.0 bits (219), Expect = 6.500e-15
Identity = 99/346 (28.61%), Postives = 141/346 (40.75%), Query Frame = 1
Query:  250 GAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAV------------GSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSV------TSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVG-----YELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLME 1209
            GA     +  G H+Y TG   N++ +F  D + G LT      +  NS      L GP A+A SPD + ++VA+              S  LT   I    + G EG    S  A  SD                  +YV+      I+ F  D++T  LT+             L     ++VS D   +Y T    +  A+ +F  +P  GEL  + A  NG           L GA +V VSP+   VYV SN   ALV    + S+GEL                    ++T QEG + ++ GL+GAR +++ PDG    V       +AVF RD   GL+E
Sbjct:   17 GANALALSAQGNHLYATGFFDNAVAVFSRDTNTGVLTF---QQVIKNSDIGNNGLQGPNAIAVSPDNKHVYVASTTDNAIVVFTRDPSSGQLTLAEIQQNGVNGVEGLAGASAIAISSDN---------------QRLYVTGTRDNAIVVFERDVNTGTLTFLQKQQDGVNNVDGLAGATAVAVSKDNLFIYVTGK--NDNAVAVFSRNPQQGELAFVAAYKNGVQPDDGPTITGLSGAYAVTVSPNNNHVYVVSNTDNALVAFSRNASTGEL------------------TYLQTHQEGTN-NINGLSGARGVAIRPDGSNVYVAGVNDDALAVFNRDTATGLLE 323          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534SHE9_9DELT (Lactonase family protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534SHE9_9DELT)

HSP 1 Score: 87.0 bits (214), Expect = 1.200e-14
Identity = 84/265 (31.70%), Postives = 121/265 (45.66%), Query Frame = 1
Query:  265 VYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTA------LADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY-------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGG---ALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVE 1011
            V +PDG HVY+  K  +++ +F  D   G LT V      ++   +   LDG   +A SPDG  ++VA     SL               TG+L+Y     D +      L     V VS P G HVY +      +  F  D  T  LT+       ++ +   L     +SVSPDG+ LY     ++GG   AL++F  +P+TG L  +Q + +G  V   L GA +VAVSP G  V+V  +   AL     D ++G L  VE
Sbjct:  109 VVSPDGVHVYVASKTGDALAVFSRDVDTGALTFV---QAKNDGVGKVNGLDGAEGIAISPDGAHVYVAGRNDDSLAVFSRD-------AATGALTYVEIQRDGSAGVVQGLLGAKAVAVS-PDGAHVYAAGSLENAVAVFGRDAATGKLTFIEVQREGQNGIVG-LDRARALSVSPDGANLY-----VAGGYDDALVVFDRNPETGMLTSVQLLEDGVGVVNGLNGADAVAVSPDGTHVFVTGSVDNALAVFERDPATGTLTYVE 356          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A496VDZ9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VDZ9_9GAMM)

HSP 1 Score: 89.0 bits (219), Expect = 1.520e-14
Identity = 99/346 (28.61%), Postives = 141/346 (40.75%), Query Frame = 1
Query:  250 GAWEAVYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAV------------GSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSV------TSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVG-----YELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF-RDP--GLME 1209
            GA     +  G H+Y TG   N++ +F  D + G LT      +  NS      L GP A+A SPD + ++VA+              S  LT   I    + G EG    S  A  SD                  +YV+      I+ F  D++T  LT+             L     ++VS D   +Y T    +  A+ +F  +P  GEL  + A  NG           L GA +V VSP+   VYV SN   ALV    + S+GEL                    ++T QEG + ++ GL+GAR +++ PDG    V       +AVF RD   GL+E
Sbjct:   55 GANALALSAQGNHLYATGFFDNAVAVFSRDTNTGVLTF---QQVIKNSDIGNNGLQGPNAIAVSPDNKHVYVASTTDNAIVVFTRDPSSGQLTLAEIQQNGVNGVEGLAGASAIAISSDN---------------QRLYVTGTRDNAIVVFERDVNTGTLTFLQKQQDGVNNVDGLAGATAVAVSKDNLFIYVTGK--NDNAVAVFSRNPQQGELAFVAAYKNGVQPDDGPTITGLSGAYAVTVSPNNNHVYVVSNTDNALVAFSRNASTGEL------------------TYLQTHQEGTN-NINGLSGARGVAIRPDGSNVYVAGVNDDALAVFNRDTATGLLE 361          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534Z3G1_9DELT (Disintegrin domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Z3G1_9DELT)

HSP 1 Score: 80.5 bits (197), Expect = 4.480e-12
Identity = 83/265 (31.32%), Postives = 119/265 (44.91%), Query Frame = 1
Query:  265 VYNPDGTHVYLTGKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY-------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGG---ALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVE 1011
            V +PDG HVY+  K  +++ +F  D   G LT V      ++   +   LDG   +A SPDG  ++VA     SL               TG+L+Y     D        L     V VS P G HVY +      +  F  D  T  LT+       ++ V     A A ++VS DG+ LY     ++GG   AL++F  +P+TG L  +Q + +G      L GA +VAVSP G  V+V  +   AL     D ++G L  VE
Sbjct:  109 VVSPDGVHVYVASKTGDALAVFSRDVDTGALTFV---QAKNDGVGKVNGLDGAEGIAISPDGAHVYVAGRNDDSLAVFSRD-------AATGALTYVEIQRDGYAGVVQGLLGAKAVAVS-PDGAHVYAAGSLENAVAVFGRDAATGKLTFIEVQREGQNGVLGLFGAKA-VTVSLDGANLY-----VAGGYDDALVVFDRNPETGMLTSVQLLEDGVGGVNGLNGADAVAVSPDGTHVFVTGSVDNALAVFERDPATGTLTYVE 356          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A534YZ16_9DELT (Uncharacterized protein n=4 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YZ16_9DELT)

HSP 1 Score: 73.9 bits (180), Expect = 4.680e-10
Identity = 78/270 (28.89%), Postives = 123/270 (45.56%), Query Frame = 1
Query:  412 LDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTA-----LADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY------RSSVTSSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF 1188
            L+G   +  SPDG+ ++VA    ++L               TG+L++     DT      L     VV+S P G HVYV+S     ++ F+ D  +  L++           + L     ++VSPDG  +Y   +  +  A+ +F  D  +G L  ++   +G      L GA SVAVSP G  VY A +   A+     D ++G+L  VE +                  +EG +G +TGLAGAR++++SPDG    V  +    +AVF
Sbjct:   47 LNGAYGVTVSPDGKQVYVAGELDNALAVFSRDPA-------TGALTFVEVEHDTVGGVAGLKGAHAVVLS-PDGAHVYVASSVADAVVVFSRDAASGALSFVETKRDNKGKVNGLNGAESVAVSPDGLHVYV--AGRNDNAIAVFERDVASGMLTFVEEQRSGTGGVEGLLGAKSVAVSPDGAHVYAAGSLDDAVAVFGRDATTGKLTFVEAQ------------------REGANG-ITGLAGARAVTLSPDGADLYVAGATDDALAVF 287          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: K9EVA1_9CYAN (Uncharacterized protein n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9EVA1_9CYAN)

HSP 1 Score: 72.4 bits (176), Expect = 1.670e-9
Identity = 82/269 (30.48%), Postives = 121/269 (44.98%), Query Frame = 1
Query:  412 LDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDT----ALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVT------SSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVF 1188
            L G + +  SPDG  +FV +   +SLT   +        +  G+L++S  + D+     L   + V VS P G  V+V+S     +M F+ D D   LT +  +       ++L     ++VSPDGS ++      S  A+ +F  D +TG L   QAI +G     EL GA  VA+SP G  V+V S    A+     D +SG L                     + I++G +G    L GA  + VSPDG    V S+V   I VF
Sbjct:  200 LFGTSGVTVSPDGTQVFVTSAVDASLTVFNL--------DAFGNLNFSQVIRDSFEVEELFGAFGVTVS-PDGSQVFVASTGDHSLMVFSRDGDG-NLTEQQLLKDGRDGINTLEGAIDVAVSPDGSQVFVVSLVDS--AITVFDRD-ETGNLTFRQAIKDGIGGAAELFGASGVAISPDGSQVFVTSRDDAAITVFNRD-ASGNL------------------TFRQAIKDGQNG-AENLFGASGVVVSPDGNQVYVTSAVDAAITVF 435          
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Match: A0A497E8U4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A497E8U4_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 4.900e-9
Identity = 97/354 (27.40%), Postives = 152/354 (42.94%), Query Frame = 1
Query:  214 EMLFSGV-IETADGAWEAVYNPDGTHVYLTGKDTNSIVIFEVD-----PSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDGRCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSD-------TALADTWDVVVSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTY---------RSSVT-SSLVAPAGMSVSPDGSLLYATDSAMSGGALLLFGTDPDTGELE-----LLQAITNGAAVGYELGGAVSVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMDGASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFR 1191
            E    GV ++   GA     +PDG  +Y+     N + +F  D     P  G LT V E+ +D    A    L G   +A SPDG  ++V +  S S+T + + D        TG L +S   ++        AL    D+V + P G H+YV++     I  F+ D  +  LT+         + SVT + L     +++SP G  LYA   +++  A+++F  + DTG  E      L+   +G  +   L GA ++ +SP G  +YVA     A+V    D + G L  VE         L+ DG             V GL G   ++++PDG   L  +     + VF 
Sbjct:  248 EQEIDGVTLDGLAGASGLAVSPDGRDLYVAAVADNGVAVFNRDAEPTSPDFGNLTFV-EAHIDG---APFNGLLGAIDVAVSPDGLHVYVVSKESDSIT-VYVRD------PATGMLDFSQHKTEGSDDVPLIALNGARDLVFT-PDGIHLYVAAQDADAITVFSRDPASGHLTFVDVVRDLDMQGSVTVNGLNFVRSLALSPGGVYLYAV--SLADDAIVVFERNRDTGSAEYGHLTFLETYRDGEGLIDGLDGATAITISPDGAYLYVAGLNDDAVVVFRRDWTDGSLTMVE---------LAQDGMPG----------VEGLDGVSGLAITPDGARLLATAVNDNALTVFE 568          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10341.339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL16_ECTSI0.000e+093.21Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
D7FP51_ECTSI1.870e-15452.10Fibronectin type III domain protein n=1 Tax=Ectoca... [more]
A0A090AEK5_9GAMM9.710e-1628.64Uncharacterized protein n=1 Tax=Thioploca ingrica ... [more]
A0A1W9X2S2_9GAMM6.500e-1528.61Uncharacterized protein n=1 Tax=Beggiatoa sp. 4572... [more]
A0A534SHE9_9DELT1.200e-1431.70Lactonase family protein (Fragment) n=1 Tax=Deltap... [more]
A0A496VDZ9_9GAMM1.520e-1428.61Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A534Z3G1_9DELT4.480e-1231.32Disintegrin domain-containing protein n=2 Tax=Delt... [more]
A0A534YZ16_9DELT4.680e-1028.89Uncharacterized protein n=4 Tax=Deltaproteobacteri... [more]
K9EVA1_9CYAN1.670e-930.48Uncharacterized protein n=3 Tax=Leptolyngbyaceae T... [more]
A0A497E8U4_9BACT4.900e-927.40Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10341contigEcto-sp13_S_contig10341:4..3632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop0
Start0
Seed ortholog score98.2
Seed ortholog evalue1.4e-17
Seed eggNOG ortholog99598.Cal7507_5769
Model size1791
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.FG-GAP repeat protein
EggNOG OGs1G8VQ@1117,1HTQN@1161,COG2706@1,COG2706@2
Ec32 ortholog descriptionLactonase domain-containing protein
Ec32 orthologEc-21_001990.1
Cds size1791
COG Functional cat.G
Best tax levelNostocales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462524.7215607-CDS-Ecto-sp13_S_contig10341:3..821681462524.7215607-CDS-Ecto-sp13_S_contig10341:3..82Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10341 4..82 +
1681462524.7320724-CDS-Ecto-sp13_S_contig10341:382..4631681462524.7320724-CDS-Ecto-sp13_S_contig10341:382..463Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10341 383..463 +
1681462524.7407777-CDS-Ecto-sp13_S_contig10341:747..14681681462524.7407777-CDS-Ecto-sp13_S_contig10341:747..1468Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10341 748..1468 +
1681462524.75701-CDS-Ecto-sp13_S_contig10341:1828..20091681462524.75701-CDS-Ecto-sp13_S_contig10341:1828..2009Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10341 1829..2009 +
1681462524.7702036-CDS-Ecto-sp13_S_contig10341:2903..36321681462524.7702036-CDS-Ecto-sp13_S_contig10341:2903..3632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10341 2904..3632 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10341.339.1prot_Ecto-sp13_S_contig10341.339.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10341 4..3632 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10341.339.1

>prot_Ecto-sp13_S_contig10341.339.1 ID=prot_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=597bp
TPAPLTPSPTTPTPSTPAPTTLAPTPATPAPLTPSPMTSAPSTPAPTTLA
PTPARTLVPITPAPQPSATAPEMLFSGVIETADGAWEAVYNPDGTHVYLT
GKDTNSIVIFEVDPSDGRLTMVGESAMDSNSAAEAGALDGPTALATSPDG
RCLFVAAVGSSSLTSLRIGDGSIGGGEGTGSLSYSARVSDTALADTWDVV
VSLPSGDHVYVSSPACGCIMTFAVDLDTCGLTYRSSVTSSLVAPAGMSVS
PDGSLLYATDSAMSGGALLLFGTDPDTGELELLQAITNGAAVGYELGGAV
SVAVSPSGKDVYVASNYPGALVHLCVDESSGELQAVEWEDNATPTGLSMD
GASMETIQEGDDGDVTGLAGARSISVSPDGGTALVVSSVTGTIAVFRDPG
LMETPAPTSDGDSMPLPSSEEWYEEHAGWLAVGAALTAVAAGGLVSVLIA
NSGCACCIVGAAISWKKKRVDCPACKKKVDVKRKGLETRARCSCDVLRAT
AEREATGDGQRRGTKGLKPMATREGSEENILFDPDPRHVAMCPHCEIVFC
APCDIRDRKRMFRFLFENSPNGVKKEETRAAVNPSAVEFGMDEAGSA
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mRNA from alignment at Ecto-sp13_S_contig10341:4..3632+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10341.339.1 ID=mRNA_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10341:4..3632+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACACCTGCCCCCCTAACACCTTCGCCGACCACGCCGACTCCAAGCACTCC AGCACCGACGACACTGGCACCGACACCAGGTGAGAAGTAGCCGAAACACC AGGCGGTTCTGATGGGTCCGATCGTCGGCAATCGTAGTCATCCCGACTTG TTCCCTCGCCACTTCCCAAGCCATAACCCGGGTCGTTCGAAGCGGTTCGA GAGTCACCCCCCGGGCGACGTGTGGATAAGCACGTCGCGGGAGGCTCGCG CAAATCGCTGCCGTTGCCCTCGATTGTATTCGAAATATGTTCCGTTCGCT TCCCCCGACGCGCCGTTCTTTTCGTGCCTCACCTATCCTCCGTGCATGTG TCGTCATGCCCCTATCACGGCTACTTCAGCCACACCTGCCCCCCTAACAC CTTCGCCGATGACGTCGGCTCCAAGCACTCCAGCACCGACGACACTGGCA CCGACACCGGGTGAGAAGTAGCCGAAACACCAGGCGGTTCTGATGGGTCC GAGCGTCGGGAACCGATACTTGTGAAAAGCAAATGGCAAGTGAAGCCACA GACTTGTACAGGCCCCACGACAGTCTTGAGGTATGGTGTTTGCCTCGTGG AGTGGGAACAACCCGATACAAAAGAAACATGAGAAACGTTTGACTTCTGA CCGGAATATGTGTAGACCTTAACCCTCAGAAACATGGTCCGCCCCGCCCA CGTTCGATGCATGTGTTCTCATGCCCCGACCACGACTACTTCAGCTCGAA CACTGGTACCTATCACGCCCGCCCCGCAGCCGTCAGCAACTGCCCCGGAA ATGTTGTTTTCGGGAGTGATCGAAACTGCCGACGGCGCGTGGGAGGCCGT CTACAACCCGGACGGCACCCACGTGTACCTTACGGGGAAGGATACTAACA GCATCGTCATATTCGAGGTGGATCCCTCGGACGGCAGACTGACAATGGTC GGCGAATCTGCCATGGACAGCAACAGCGCGGCGGAGGCAGGGGCTCTCGA CGGCCCCACCGCCCTAGCGACGTCCCCGGACGGGCGATGCCTCTTCGTGG CGGCAGTGGGCAGCAGCTCGCTGACGAGCCTGAGAATAGGCGACGGCTCT ATCGGCGGCGGGGAGGGAACGGGTAGCCTGAGCTATTCGGCCCGTGTGAG CGATACCGCGCTGGCGGACACCTGGGACGTCGTCGTCAGCCTCCCGTCGG GAGACCACGTGTACGTGTCGTCCCCGGCGTGTGGGTGCATCATGACATTC GCTGTGGACCTGGACACGTGTGGGTTGACGTACCGGTCCAGCGTGACCTC TTCTCTGGTCGCCCCGGCGGGAATGTCTGTCTCGCCGGATGGGTCGCTCC TGTACGCGACGGACTCCGCGATGTCCGGCGGAGCTCTCTTGTTGTTTGGC ACAGACCCGGACACCGGGGAGCTGGAGCTACTACAGGCCATTACAAACGG GGCAGCTGTGGGATAGTAAGCATCCACAGGATTAGAAGTTCGCATTCCTT AATTGGCTTACTTTGTCTCTGTAGTTTGATTCAAAACGCTCGTACGGCAC TCGAACAAGAGTTTGCGGCAGACAGAAGGCACCGCGATTGCCGTTGTCAG ACGGACATACCAAAGCACTCCATTCCAAGGATGCTGCGTACCCCGACAAC GATGGTGGTCCCACACTTGGTGCAGACTGATTCTGCCGGGTTACATCCCA AGGTGACCGGAGCAGCAAGTACTTCTAGCAAAACCAGTCCGCGACCGCGC ACCAAGCAAAGGCTAACTGACGTGCCCAGGCCAAAACCAATCTTCCCGAC GATCCGTGTCTACCCTCGCACGCAGCGAGCTCGGCGGTGCCGTATCTGTG GCCGTCAGTCCCTCCGGAAAGGACGTGTACGTCGCTTCGAACTACCCGGG AGCCTTGGTGCACTTGTGCGTGGACGAGAGCAGTGGGGAGCTACAGGCGG TGGAGTGGGAAGACAACGCGACTCCCACAGGCTTGAGCATGGATGGGGCG TCGATGGTGAGTTTGAAGTGCTTCCAGCATCACCTCATGTCCTGCCGTTT GTCATCGCGTAGTTAGTGCGAGTTCGGCGTCCCTTGGCATCATCACACGT CAGCAGCTAACACGTCACCTATGCTTGCCCCATGGAAAGCGCCAGACCGT CTCTCTACGTCAACCTGTTCTTTTCCATCTAATGATGAGGTAGACGCGAG ACTTTTCACCTATATCTGGTTCTGAGTACGTTGTTTCCCTCAGGTTACTG TCAACCCGAGCAACTCTCGCGTCTTGGTGGCAAGCACGACAAACAGCACG CTGTGGGTGCTGGACAACATCAATGACGACAGCATCAGCGGCGGATGCGC GATTCTCGAGCTGCAGGTTTGTTCGCCGACTCAAACGTAATACCATCTCG CCCGGCAAACTTGAGCAAGCACAACGCTGCTCTCATACCCGCGAAGCACC CTTTCCCCACACGTCGGGTAGAACCTGGTGAGTAGAACCTGATTTGTCGA GCACCACATCTGTGTTGTAATCATGTTCCCGAGGAACGGTTCAAGAGACA AACTCCTCAAGTCTTGCAACTTGCGGATTTTCGGCGCAACTTATCGCGGG AAGCGTGGGAACACACGTCCATGCGATGCTACTTCTGGGTGCAATGTAGA GATGTTCGTCTTCATCTCAATCGAACCCACTGGAAACTGGGGCTTCACAC GGCACCAGGGATGGAGGGCGCATCCTCAATGGCTTCAACAAGCTCGCTAG AAGACGACAAGAACATTTTTGCGGAGCCCCTGAAGACTCAGCATCACGCG AAGAAAACCACACTAAACGTTGTCCCCTTCGTCGGCTAAGTTTCATCCAA AATACCACCCGCGGACAACACAATGTCGAACAACAAACAAAAAAACACAG GAAACGATACAGGAGGGGGACGACGGCGACGTCACGGGCCTGGCCGGTGC CAGGAGCATCTCCGTCAGTCCCGACGGTGGCACGGCCCTCGTGGTCAGCT CCGTGACCGGCACGATCGCGGTATTCCGTGACCCCGGCCTCATGGAAACA CCGGCACCCACCTCGGACGGAGATAGCATGCCTTTGCCCTCCTCGGAAGA GTGGTACGAAGAGCACGCCGGTTGGCTTGCGGTGGGTGCGGCTTTAACCG CCGTAGCGGCGGGCGGCTTGGTCTCGGTCTTAATCGCGAACAGTGGCTGT GCGTGCTGCATTGTTGGCGCCGCCATTTCGTGGAAGAAGAAGAGAGTCGA CTGCCCGGCGTGCAAGAAGAAGGTCGACGTCAAGCGGAAAGGGCTCGAGA CCCGCGCCCGCTGCTCGTGCGATGTCCTGCGCGCCACGGCGGAAAGGGAG GCGACCGGAGACGGGCAACGGAGAGGCACCAAGGGGCTGAAACCGATGGC AACGAGGGAAGGGAGTGAGGAGAATATTTTGTTCGACCCGGACCCCAGGC ACGTCGCGATGTGTCCACACTGTGAGATCGTGTTCTGCGCCCCGTGTGAC ATCCGCGACAGAAAACGAATGTTTCGTTTCCTTTTCGAGAACAGTCCCAA CGGTGTCAAGAAGGAGGAAACAAGAGCAGCGGTTAATCCTTCGGCCGTAG AGTTTGGGATGGACGAAGCGGGAAGCGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10341:4..3632+

>mRNA_Ecto-sp13_S_contig10341.339.1 ID=mRNA_Ecto-sp13_S_contig10341.339.1|Name=mRNA_Ecto-sp13_S_contig10341.339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1791bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10341:4..3632+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACACCTGCCCCCCTAACACCTTCGCCGACCACGCCGACTCCAAGCACTCC
AGCACCGACGACACTGGCACCGACACCAGCCACACCTGCCCCCCTAACAC
CTTCGCCGATGACGTCGGCTCCAAGCACTCCAGCACCGACGACACTGGCA
CCGACACCGGCTCGAACACTGGTACCTATCACGCCCGCCCCGCAGCCGTC
AGCAACTGCCCCGGAAATGTTGTTTTCGGGAGTGATCGAAACTGCCGACG
GCGCGTGGGAGGCCGTCTACAACCCGGACGGCACCCACGTGTACCTTACG
GGGAAGGATACTAACAGCATCGTCATATTCGAGGTGGATCCCTCGGACGG
CAGACTGACAATGGTCGGCGAATCTGCCATGGACAGCAACAGCGCGGCGG
AGGCAGGGGCTCTCGACGGCCCCACCGCCCTAGCGACGTCCCCGGACGGG
CGATGCCTCTTCGTGGCGGCAGTGGGCAGCAGCTCGCTGACGAGCCTGAG
AATAGGCGACGGCTCTATCGGCGGCGGGGAGGGAACGGGTAGCCTGAGCT
ATTCGGCCCGTGTGAGCGATACCGCGCTGGCGGACACCTGGGACGTCGTC
GTCAGCCTCCCGTCGGGAGACCACGTGTACGTGTCGTCCCCGGCGTGTGG
GTGCATCATGACATTCGCTGTGGACCTGGACACGTGTGGGTTGACGTACC
GGTCCAGCGTGACCTCTTCTCTGGTCGCCCCGGCGGGAATGTCTGTCTCG
CCGGATGGGTCGCTCCTGTACGCGACGGACTCCGCGATGTCCGGCGGAGC
TCTCTTGTTGTTTGGCACAGACCCGGACACCGGGGAGCTGGAGCTACTAC
AGGCCATTACAAACGGGGCAGCTGTGGGATACGAGCTCGGCGGTGCCGTA
TCTGTGGCCGTCAGTCCCTCCGGAAAGGACGTGTACGTCGCTTCGAACTA
CCCGGGAGCCTTGGTGCACTTGTGCGTGGACGAGAGCAGTGGGGAGCTAC
AGGCGGTGGAGTGGGAAGACAACGCGACTCCCACAGGCTTGAGCATGGAT
GGGGCGTCGATGGAAACGATACAGGAGGGGGACGACGGCGACGTCACGGG
CCTGGCCGGTGCCAGGAGCATCTCCGTCAGTCCCGACGGTGGCACGGCCC
TCGTGGTCAGCTCCGTGACCGGCACGATCGCGGTATTCCGTGACCCCGGC
CTCATGGAAACACCGGCACCCACCTCGGACGGAGATAGCATGCCTTTGCC
CTCCTCGGAAGAGTGGTACGAAGAGCACGCCGGTTGGCTTGCGGTGGGTG
CGGCTTTAACCGCCGTAGCGGCGGGCGGCTTGGTCTCGGTCTTAATCGCG
AACAGTGGCTGTGCGTGCTGCATTGTTGGCGCCGCCATTTCGTGGAAGAA
GAAGAGAGTCGACTGCCCGGCGTGCAAGAAGAAGGTCGACGTCAAGCGGA
AAGGGCTCGAGACCCGCGCCCGCTGCTCGTGCGATGTCCTGCGCGCCACG
GCGGAAAGGGAGGCGACCGGAGACGGGCAACGGAGAGGCACCAAGGGGCT
GAAACCGATGGCAACGAGGGAAGGGAGTGAGGAGAATATTTTGTTCGACC
CGGACCCCAGGCACGTCGCGATGTGTCCACACTGTGAGATCGTGTTCTGC
GCCCCGTGTGACATCCGCGACAGAAAACGAATGTTTCGTTTCCTTTTCGA
GAACAGTCCCAACGGTGTCAAGAAGGAGGAAACAAGAGCAGCGGTTAATC
CTTCGGCCGTAGAGTTTGGGATGGACGAAGCGGGAAGCGCC
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