mRNA_Ecto-sp13_S_contig1034.336.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI) HSP 1 Score: 695 bits (1794), Expect = 9.810e-242 Identity = 487/565 (86.19%), Postives = 491/565 (86.90%), Query Frame = 1 Query: 313 MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSSATNPLGGTPXXXXXXXXANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAGANNNNAGTPAPNPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSNFGNLNLGGGTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 2007 MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQ+TLASYTVEADSTVHLVRSQARAAP+ P AGGAAGTNPS SATNP GGTP XXX ANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMV NDNAGTAGAN PSAGPNTSALPNPWAAAG NA GQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQ MEQLQRAG+LPPGMMPG PGAGG DFGPGLAGLSNFG NLGGGTPPAAGGLDFSTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPVANPE+ YAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV Sbjct: 1 MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQDTLASYTVEADSTVHLVRSQARAAPSMPAAGGAAGTNPSPSATNPFGGTPPGGAXXXGANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAGXXXXXXXXXTNAPAQTPGANPWAALRQGMGAAGGGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGADFGPGLAGLSNFGTFNLGGGTPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PPVANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA) HSP 1 Score: 265 bits (677), Expect = 7.950e-76 Identity = 248/575 (43.13%), Postives = 293/575 (50.96%), Query Frame = 1 Query: 328 VNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSSATNPLGGTPXXXXXXXXANPFAE-----------MMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAGANNNNA--GTPAPNPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSNFGNLNLGGGTPP----AAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGG 2001 V++RCSN +KFT +DT TV AFK I+E+A V E QRLIYKGRV+K+DQ TLASY V+ D+T+HLVR A PA G AA P XXXXXXXX MM M GGG DI+RMQQQL+SNPEMMANIMN XXXXXXXXXXXXXXXX PA +RQ L+M RNP AM +A RSQD MS +E P GFNALRR+YTE+QEPMM+A GT A+PNPWAA P AAP A XXX Q DPA + MM NPM Q M+ QM +PA++E M+ NPQL+ + A P +R QLPQ + M+DP N+QA+ QMQQSM QLQRAG++PP +PG P A TP AAGGLDFS L A PP ANP + YAAQL Q+ MGF+D AA +RALV ++GNVN AVER++GG Sbjct: 5 VHIRCSNAQKFTVPLDTSVTVGAFKATIAEQAQVPAESQRLIYKGRVLKDDQ-TLASYDVQPDTTIHLVRG---ARPA----GEAAAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGMMQGMMGGGADISRMQQQLLSNPEMMANIMNSPMMQGLLNDPETLRSMVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYTEMQEPMMEAMSNPEQQXXXXXXXXXXXXXXXGT------------AMPNPWAA---PGAAPQAAGAAGXXXAGANPWSSLMGGAGGPPPAGMAPPGMAQ-DPAAVLNMMQNPMAQDMIRQMTSNPAVVEQMLNMNPQLRAMVDAQPGMRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPP--IPGM-----XXXXXAPAAA-------------TPXXXXXAAGGLDFSALLAGHGVGMPPGSGAAVPPAWLAA------------------AQPPPPPANPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A6P4A685_ZIZJJ (ubiquitin domain-containing protein DSK2a-like isoform X2 n=7 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4A685_ZIZJJ) HSP 1 Score: 204 bits (518), Expect = 4.270e-53 Identity = 218/596 (36.58%), Postives = 283/596 (47.48%), Query Frame = 1 Query: 322 VSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAG------GAAGTNPSSSATN---PLGGT--PXXXXXXXXANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAG--------------------ANNNNAGTPAPNPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSN-FGNLNLGGGTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVAN---PEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 V+VN+RCSNG KFT + ++TV +FK +S+K + + QRLIYKGR++K+DQ TL SY +EAD TVHLVR A +A A PG A +NPS N PLGG+ P E G G G DI +MQQQL NP +M +IMN XXXXXXXXXXXXXXXXXXXXXXXXXXXX P+T+RQ L+ ARNPE M + R+ D MS IE P GFN LRR+Y VQEP + A+ + NAGT AN + G+ S PNT+ PW + GT T N G D + + Q+M NP + QM+ + +P + + NPQ + L +N LR L P+F+R++ P+ +Q L +QQS+ L + P PG G GG+ GL L N FG L G SLA P + PE++YA QL+Q+ +MGF DR +RAL+A+ GNV+ AVER+LG Sbjct: 22 VNVNIRCSNGNKFTVTITLDSTVGSFKDVLSQKCDIPTDQQRLIYKGRILKDDQ-TLQSYGLEADHTVHLVRGFAPSASANPGGATDARGPNATQSNPSGVGQNEDVPLGGSTFPANLFPGLGLGGMGEGGGLFGAGLPDIEQMQQQLTRNPNIMRDIMNMPVVQNLMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPFLNATTMAGNAGNAGTDSSNPFASLLATQGGSQTRNQPANQSTTGSELTTGSPAPNTNXXXXPWTSGGTAGGTQT---NTTRSNLTGDARPQAPAGLGGLGLPEFEGMLGGMQDTSSLNQIMQNPAISQMMQNLLSNPQFVNQTLGLNPQTRSMLDSNSHLREMLQNPEFLRQLTSPETMQLLLTLQQSL--LTQLSRQQPTQEPGQTG-GGTGPFNNMGLDMLMNMFGGLGAG---------------------------------------------------------SLAVPNRSDVPPEELYATQLSQLQEMGFFDRQENLRALIATAGNVHAAVERLLG 553
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A1S4A5X4_TOBAC (ubiquitin domain-containing protein DSK2b-like isoform X1 n=13 Tax=Nicotiana TaxID=4085 RepID=A0A1S4A5X4_TOBAC) HSP 1 Score: 200 bits (509), Expect = 6.090e-52 Identity = 215/591 (36.38%), Postives = 283/591 (47.88%), Query Frame = 1 Query: 322 VSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSSATNP---------LGGTPXXXXXXXXANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTA-----------GANNNNAGTPAP--------NPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSN-FGNLNLGG-GTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 V++NVRCSNG KF+ +V ++TV +FK +S+ + + E QRLIYKGR++K+DQ TL SY +EAD TVHLVR A AA A+ G TN + P +GG P PF G G D ++QQQL NP+MM ++MN XXXXXXXXXXXXXXXXXXXXXXXXXX P+T+RQ ++ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ D N A G N T P NP A PNT+ LPNPWA+AGT AA A + G D + + Q+M NP + QM+ + +P M + NPQL+ L +NP LR Q P+F+R++ P+ +Q + +QQ + L + G G AG +A D G+ L N FG L GG G P + PE++YA QL Q+ +MGF D +RAL+A+ GNV+ AVER+LG Sbjct: 27 VTINVRCSNGSKFSVQVSLDSTVGSFKSVLSQPSDIPAEQQRLIYKGRILKDDQ-TLTSYGLEADHTVHLVRGFAPAASASATNAGNPNTNQNIPGDAPPNVGGPFAGVGGAPLFPGLGSGGGPF-------GAGLPDFEQVQQQLTQNPDMMRDMMNMPLVQNLMNXXXXXXXXXXXXXXXXXXXXXXXXXXHILNDPSTLRQTMEAARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGGQGRNQATSPPVTGSETTANPPA-PNTNPLPNPWASAGTGAAQTNTTARSNAAADTRAPPLGGLGALPDLQQMLG-----GMPDASSLNQLMQNPAISQMMQSLLSNPQYMNQISGLNPQLRSMLDSNPHLREXMQXPEFIRQLTSPETMQQVMTLQQGL--LSQLGRQQTNQGQGQD-AGRTAFDN-MGMEMLMNMFGGLGTGGLGVPNRSN-------------------------------------------------------VPPEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVERLLG 544
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A3Q7FI77_SOLLC (Uncharacterized protein n=4 Tax=Solanum TaxID=4107 RepID=A0A3Q7FI77_SOLLC) HSP 1 Score: 200 bits (509), Expect = 7.250e-52 Identity = 221/594 (37.21%), Postives = 289/594 (48.65%), Query Frame = 1 Query: 322 VSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATP------GAGGAAGTNPSSSATNPLGGTPXXXXXXXXANPFAEMMGSMGGGGM------DINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAGAN-----------------NN--NAGTPAPNPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSN-FGNLNLGG-GTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 V++N+RCS+G KF+ +V ++TV +FK ++++A + E QRLIYKGR++K++Q TL SY +EAD TVHLVR A A A P G A P S+A++ G P A+ F + GS GGGG+ D ++QQQL NP+MM ++MN XXXXXXXXXXXXXXXXXXXXXXX PAT+RQ ++ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + AS + D AG+N NN AG+ + PNT+ LPNPWA+AGT AA AN XXXXXX G D + QMM NP + QM+ + +P M ++ NPQL Q P+F+R++ P+ VQ L QQ + + G PG AGG+A D G+ L N FG L GG G P + PE++YA QLTQ+ +MGF D +RAL AS GNV+ AVER+LG Sbjct: 30 VTINIRCSSGSKFSVQVSLDSTVGSFKSILAQQANIPAEQQRLIYKGRILKDEQ-TLESYGLEADHTVHLVRGSAPAPSANPACAPNVGGPNTAQNAPRSAASDAGGPFPGSGLG---ASMFPGL-GSGGGGGLFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLVQNLMNNPETXXXXXXXXXXXXXXXXXXXXXXXVLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNAST--LSGDTRNDAGSNPFAALLGAQGGLGRQQANNPPTAGSETTDNLPAPNTNPLPNPWASAGTGAAQ----ANTXXXXXXAGDTRGAPLGLGGLGSPGLEQMLGGMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGMNPQLXXXXXXXXXXXXXMQNPEFIRQLTSPETVQQLMTFQQGLAS--QLGRQQTNQQPGQ-NAGGAALDNS-GMEMLMNMFGGLGTGGLGVPNRSN-------------------------------------------------------VPPEELYATQLTQLQEMGFFDTQENIRALTASGGNVHAAVERLLG 553
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A1S4AGM9_TOBAC (ubiquitin domain-containing protein DSK2b-like isoform X1 n=13 Tax=Nicotiana TaxID=4085 RepID=A0A1S4AGM9_TOBAC) HSP 1 Score: 191 bits (486), Expect = 9.120e-49 Identity = 209/607 (34.43%), Postives = 285/607 (46.95%), Query Frame = 1 Query: 277 EYRQGHSSIVVNMPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAG-GAAGTN-----PSSSATNPLGGTPXXXXXXXXANPFAEMMGSMGGGGM------DINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDN-------AGTAGANNNNAGTPAPN--PSAG---------PNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSNFGNLNLGG-GTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 E G + V V++NVRCSNG KF+ +V+ ++TV +FK + + A + E QRLIYKGR++K++Q TL SY +EAD TVHL+R A A P + A G N P +A+N +GG P +GS GGGG+ D ++QQQL NP MM +++N XXXXXXXXXXXXXXXXXXXXX PAT+RQ ++ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP++ A+ D N A GA G N P++G PNT+ LPNPWA+AGT AA A + G D + QMM NP + QM+ + +P M ++ NPQL+ L +N P+F+R++ P+ +Q L Q + L +A G AGG+A D G + ++ FG L GG G P + PE++YA QLTQ+ +MGF D +RAL+A+ GNV+ AVER++G Sbjct: 11 ENNTGAGAGAVAGEGVTINVRCSNGSKFSVKVNLDSTVGSFKSILVQHANIPAENQRLIYKGRILKDEQ-TLESYGLEADHTVHLIRGSGPAPSANPASSTNAGGPNTDQHAPRDAASN-VGGPFPGSGLGVSLFPG---LGSGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDMLNMPLVQNLMNNPETIXXXXXXXXXXXXXXXXXXXXXHVLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPLLNATTLSGDTRNDVGSNPFAALLGAQGGGQGRHQSNNPPTSGSETTDNPPAPNTNPLPNPWASAGTGAAQANTPARSNTVADTRAAPLGGLGGLASPGLEQMLS---GMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGLNPQLRSMLDSNSXXXXXXXXPEFIRQLTSPETMQQLMTFQHGL--LSQAWRQQTNQQVGQ-NAGGAAGDNGMEML-MNMFGGLETGGLGVPNRSN-------------------------------------------------------VPPEELYATQLTQLQEMGFFDTQENIRALIATAGNVHAAVERLIG 550
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A6D2I4V8_9BRAS (Uncharacterized protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I4V8_9BRAS) HSP 1 Score: 191 bits (486), Expect = 1.090e-48 Identity = 196/601 (32.61%), Postives = 273/601 (45.42%), Query Frame = 1 Query: 322 VSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSS-SATNPLGGTPXXXXXXXXA----------NPFA---EMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAGANN-------------------NNAGTPAPNPSAG---PNTSALPNPWAAAGTPAAAP---TGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSN-FGNLNLGGGTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 V+VNVRCSNG KF+ ++TV AFK+ +++ + V QRLIYKGR++K+DQ+ L SY ++ D T+H+VR A ++ P AG ++ SAT +GG NP M G G G D+ + QQQL NP M+ ++MN XXXX P+ +RQ L+ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ + NAG+ A+N NN+ TP + G PN++ LPNPW A G AP G +A XXXXXXXXXXX G D + + Q++ NP + QM+ + +P M +++ NPQ+Q L +NP LR + P F+R+ + P+ +Q + +QQS+ R PG GA + T GL L N FG+L GG + P PE+ +A QL Q+ +MGF DRA +RAL+A+ GNVN AVER+LG Sbjct: 23 VAVNVRCSNGTKFSVTTSLDSTVEAFKELVAQNSDVPANQQRLIYKGRILKDDQSLL-SYGLQGDHTIHMVRGFAPSSAPPPAPAANAGNQTTAPSATRGVGGNDSSNLGGVNPVESLFPGLGFNPLGGGNAMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNTPAIQNIMNNPEFMRSMIMSNPQMRELVDRXXXXGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPFLNAT---TMSGNAGSNAASNPFAALLGNQGVTTQGSDVSNNSSTPNADTGTGNSIPNSNPLPNPWGATGGQTTAPGRTNSGGDARGPALGGLGXXXXXXXXXXXLGADPTLG--GTPDASQLNQLLQNPAMSQMMQSVLSNPQYMNQLMSLNPQVQGMLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTT---QDPGQTGAAAAGTGNNAGLDLLMNMFGSLGAGG------------------------------------------------------LSGANQPNVPPEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 560
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A2G2ZM95_CAPAN (Ubiquitin domain-containing protein DSK2b n=5 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZM95_CAPAN) HSP 1 Score: 191 bits (484), Expect = 1.760e-48 Identity = 218/589 (37.01%), Postives = 278/589 (47.20%), Query Frame = 1 Query: 325 SVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSSATNPLGGTPXXXXXXXXANPFAEMMGSMG--------GGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQAS--EGMVDNDN-----AGTAGANNNNAGTPAPN--PSAG---------PNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSM-EQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSN-FGNLNLGG-GTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 ++N+RCS+G KF+ +V+ ++TV +FK K+ E A E QRLIYKGR++K+DQ TL SY +EAD TVHLVR A A A P + AG P+++ P TP + A G D ++QQQL NP++M ++MN XXXXXXXXXXXXXXXXXXXXXXXXXXXXX PAT+RQ ++ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + AS G ND A GA G PN P+ G PNT+ LPNPWA+AGT AA N G D + QMM NP V QM+ + +P M ++ NPQL+ Q P+F+R++ P+ +Q L QQ + QL R G AGG A D G+ L N FG L GG G P P PE++YA QLTQ+ +MGF D +RAL A+ GNV+ AVER+LG Sbjct: 31 NINIRCSSGSKFSLQVNLDSTVGSFKSKLVEHANFPVEQQRLIYKGRILKDDQ-TLQSYGLEADHTVHLVRGFAPAPSANPASATNAG-GPTTAQNAPRDATPDAGAPFPGSGLGASTXXXXXXXXXXXXXAGLPDFEQVQQQLTQNPDLMRDMMNMPLFQNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNASTLSGDARNDTGSNPFAALLGAQGGGQGRQQPNNPPTTGSETPDNLPAPNTNPLPNPWASAGTGAAQ----TNTTARSNTAGGTRDAPLGLGGLASPGLEQMLGGMPDTTSLNQMMQNPAVSQMMQSLLSNPQYMNQVLGLNPQLRSXXXXXXXXXXXMQNPEFIRQLTSPETMQQLMTFQQGLASQLGRQQTNQQGQN-----AGGGALDNA-GMEMLMNMFGGLGTGGLGVPNR-------------------------------------------------------PNVPPEELYATQLTQLQEMGFFDTQENIRALTATAGNVHAAVERLLG 552
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A7I8J9B4_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J9B4_SPIIN) HSP 1 Score: 190 bits (483), Expect = 4.690e-48 Identity = 195/580 (33.62%), Postives = 263/580 (45.34%), Query Frame = 1 Query: 295 SSIVVNMPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSS-ATNPLGGTPXXXXXXXXANPFAEMMGSMGGGGM---------DINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDNAGTAGANNNNAGTPAPNPSAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSNFGNLNLGGGTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1998 SS + V+V+VRCSNG KF+ V ++TV +FK ++EK+ V E QRLIYKGR++K++Q TL SY +E D TVHLVR A + PA AGTN ++S A+ GT X + G+ G+ + +++QQQL NP MM IMN XXXXXXXXXXXXXX P+T+RQ L+ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ D A A S PNT+ LPNPW A P GGA G DPA++ Q++ NP + ++ + +P NPQ++ L++N LR L P+F+R++ P+ VQ L +QQS+ L G PG GAG + G GL L N ++ +PP A V PE +YA QL+Q+ +MGF D +RAL A+ GNV+ AVER+LG Sbjct: 84 SSALGGGGPVTVHVRCSNGSKFSVLVALDSTVRSFKAIVAEKSDVPAEQQRLIYKGRILKDEQ-TLESYGLEPDHTVHLVRGSASSPPAA----APAGTNTNASRASADTQGTGRNAGPNEXXXXXXXIFGTSLFPGLSPAGLAGFPEFDQVQQQLTQNPNMMREIMNLPAIQNLMNNPDLMRNLIMANPQXXXXXXXXXXXXXXLNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMGADAGAAXXXXXXXPLAAGETTTESPAPNTNPLPNPWGA-------PAGGAPTANARAPPPAAETRLPGLGGLGFPDMEQMVNGMQDPALLNQVLQNPAMSNIMQSLLSNPNP-----RLNPQMRSLLESNTQLREMLQNPEFLRQLTSPETVQQLLTLQQSLMSL---GRQQPGQEQNQTGAGAGGLNNGGGLDLLMNMFGVSAPAVSPPPR----------------------------------------------------AQKVMPPEQLYATQLSQLQEMGFFDTQENIRALRATAGNVHAAVERLLG 591
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Match: A0A2G9HIA7_9LAMI (Ubiquitin-like protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HIA7_9LAMI) HSP 1 Score: 187 bits (476), Expect = 2.040e-47 Identity = 212/591 (35.87%), Postives = 276/591 (46.70%), Query Frame = 1 Query: 319 EVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQNTLASYTVEADSTVHLVRSQARAAPATPGAGGAAGTNPSSSATNPLGGTPXXXXXXXXANPFAEMM-----------GSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVDNDN-----------AGTAGA----NNNNAGTPAPNP---SAGPNTSALPNPWAAAGTPAAAPTGGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSME-QLQRAGMLPPGMMPGAPGAGGSATDFGPGLAGLSNFGNLNLGGGTPPAAGGLDFSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPPVANPEDMYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERML 1995 +V+VN+RCSNG KF +V +TV FK +++K + + QRLIYKGR++K+DQ TL SY +EAD TVHLVR A AAPA A AG ++S XXXXXXXX G G + +MQQQL NP M+ +I+N XXXXXXXXXXXXXXXXXXXXX PAT+RQ ++ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ DN + G AG N N+ TPA S PN + LPNPWA+AGT GA A D Q+M NP + QM+ + +P M ++ NPQLQ +NP LR Q P+ +RR+ P+ +Q L Q++ QL R P G G G+A + G + ++ FG L GGG P S PP E++YA QL+Q+ +MGF D +RAL+A+ GNV+ AVER+L Sbjct: 20 QVTVNIRCSNGSKFAVQVGLNSTVELFKSILAQKCEIPSQEQRLIYKGRILKDDQ-TLRSYGLEADHTVHLVRRFATAAPAESAATTDAGVQSTNSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFGAVLPGMEQMQQQLTENPNMIRDILNMPLVQNLMNNPEIXXXXXXXXXXXXXXXXXXXXXAHILNDPATLRQTMEAARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATAMTGDNRSDQGSNPFAALLGGQAGGPGRENPTNSTTPASGTTTNSPAPNANPLPNPWASAGTGVTQTNSGARANPTDVRPMSPGGLSGLGFPDLEGMMGSMP----DITSFNQLMQNPAISQMMRNLLSNPQYMNQILGLNPQLQSMFDSNPQLRDTMQNPELIRRLTSPEMMQQLLNFYQALSSQLGRQTSQEPRQHAG--GTAGTADNMGLDML-MNLFGGLGFGGGIPTP-------------------------------------------------NRSQVPP----EELYATQLSQLREMGFYDTQENIRALIATAGNVHAAVERLL 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1034.336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1034.336.1 >prot_Ecto-sp13_S_contig1034.336.1 ID=prot_Ecto-sp13_S_contig1034.336.1|Name=mRNA_Ecto-sp13_S_contig1034.336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=566bp MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGback to top mRNA from alignment at Ecto-sp13_S_contig1034:5835..15655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1034.336.1 ID=mRNA_Ecto-sp13_S_contig1034.336.1|Name=mRNA_Ecto-sp13_S_contig1034.336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9821bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1034:5835..15655+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1034:5835..15655+ >mRNA_Ecto-sp13_S_contig1034.336.1 ID=mRNA_Ecto-sp13_S_contig1034.336.1|Name=mRNA_Ecto-sp13_S_contig1034.336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1698bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1034:5835..15655+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |