mRNA_Ecto-sp13_S_contig10336.331.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig10336.331.1
Unique Name	mRNA_Ecto-sp13_S_contig10336.331.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 896 bits (2315), Expect = 0.000e+0
Identity = 483/511 (94.52%), Postives = 495/511 (96.87%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXX--SRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQDDGGRHHRSTESSGART 1527
            ++ESVLRLIIEKGLEIDVEIKIMDTGEAV+DDE+DECDALFTMDDVVDGTAD KKQ TDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETIL TPVAG+ GCEAAAATQAVLQGDE GSDSGTLKG+GGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVL DESRPKLTRQSSVAYLASFLARASFVDPSLVS AVQSLL+WAGQYLDQYADAS+ATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDG GG+MQAPMSA+A+RSG XXXXXXXXXXXXXX  SRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYID MYNTWKAQDD  R  RST+SSGART
Sbjct:  172 IEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTLKGRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYADASVATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGGGGVMQAPMSAMAARSGXXXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSSR--RSTKSSGART 680

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 617 bits (1590), Expect = 2.010e-215
Identity = 339/367 (92.37%), Postives = 351/367 (95.64%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXX---SRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVI 1092
            ++ESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQ+TDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILET VAG+ GCEA AA QAVLQGDE GSDS T KG+GGGSTGGMQGMEPVARLLKSLL+VFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVL+DESRPKLTRQSSVAYLASF+ARASFVDPSLVS AVQSLL+WAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDG GGM+ APMSAVASRSG   XXXXXXXXXXXX   SRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQA++
Sbjct:  215 IEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTPKGRGGGSTGGMQGMEPVARLLKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGGGGMIDAPMSAVASRSGVGGXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQALL 581

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: D7FZI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI0_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.890e-55
Identity = 109/151 (72.19%), Postives = 115/151 (76.16%), Query Frame = 1

Query:  601 KLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYAD----ASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCF 1041
            +L RQSSVAYLA  L RASFVDPS+V+ AVQSLL+WAGQYLD        AS A PVQA GTPSSKGFETPVATRVR RP+SWHGNHPRRSANGGDG GGMMQAPMS V+SRSG XXX           SR  DH L YSVCQA FYVMCF
Sbjct:   19 QLARQSSVAYLARSLGRASFVDPSVVATAVQSLLDWAGQYLDXXXXXXXXASTAAPVQARGTPSSKGFETPVATRVRVRPRSWHGNHPRRSANGGDG-GGMMQAPMSGVSSRSGXXXXGGVGVRSSRK-SRLPDHTLCYSVCQAMFYVMCF 167

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: A0A7S1ZLF3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 8.460e-42
Identity = 160/565 (28.32%), Postives = 227/565 (40.18%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDED-----DECDALFTMDDVVDGTADNKKQNTD----EVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASG----------------------------RARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDEL--------------------------AAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHL--------AGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQDD 1482
            +Q +VL L+++K LEIDVEIK+ + G   ++ +D     DE   LF ++   D  A  KK+N+     +VD+MADKLD +ML+VF +L      + + P                                                       RL K +  VF+ NIL THR KFVQFV+F   G                                L     +KL+ ++ D  R  +TRQS+  YLASF++RAS+V P  +  +V ++L WA  Y+D +       P  +    ++ G  +       +RP++   N                Q  M                            H LFY+VCQA +Y MCFRG E                           A     D  A  W ++    L PL+ CL++VR EF  L    +   LD +LL+HL        +G+S+ R + ++ I        STP +     M              GGLGRGSNPLDSFFPFDPYLLRRSH +++  Y  W+   D
Sbjct:  371 IQGAVLGLLLDKALEIDVEIKVEEGGGVAIEIDDEXXXXDEMAGLFELEMGDDKKA--KKENSVVEDVKVDDMADKLDSIMLLVFQHLSACCKNDVTAPK------------------------------------------------------RLYKIMSPVFDSNILTTHRCKFVQFVMFVICGFDNDISAIHHNNNHIATSDSHDNDDGEHHQSKLYREFAAKLIDIVLDPYRATVTRQSAACYLASFMSRASYVCPETICESVSAMLRWAEAYMDTFPK-----PRMSSANDTNSGISS-------SRPRNGMNNM-------------REQCEM----------------------------HSLFYTVCQAAYYTMCFRGVEATQYFNTCVEYYSQHNINEDDDEDIPYAHPNDIDISAQRWMKVCGHHLQPLKYCLESVRHEFLHL--ASVFGLLDENLLQHLVLEDQKMASGLSKMRQRKARLI--------STPATLEKERMKGGV----------GGLGRGSNPLDSFFPFDPYLLRRSHPFVEPFYKHWEGSAD 806

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: B7GDC9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDC9_PHATC)

HSP 1 Score: 148 bits (373), Expect = 1.930e-34
Identity = 142/527 (26.94%), Postives = 205/527 (38.90%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQ----NTDE--VDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASG--------------RARGLGYA-LVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRG---------------DELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLC--CGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTW 1467
            ++  VL  +IEK LE+DVEIKI + GEA +D +     ++F +D   D  +  ++Q    N  E  V++MA+KLD +M ++  Y++Q    NA L                                                      +    + L   FE +I+ TH+SKFVQF++    G              ++  + Y    S L+ V+ D  R  +TRQ++  YLASF++RASFV       +V +LL W   Y+      S+                              H    R   N                                         H LFY++ QA FY+MCFRG               D  A  E  D     W  L + PL PLR CL++VR EF  L   C L++A +   L +    + +   +    I        +TP +     +S             GGLG+G+NPLDSFFPFDPYLLR+SHV++D  YN W
Sbjct:  255 MEAQVLEFLIEKSLEMDVEIKIDEGGEAEIDTDY----SVFQLDMDSDAHSLRRRQLNEVNVQESIVNDMAEKLDSLMFLLLEYVEQSCAGNADL------------------------------------------------------IREKYRILAQFFESSIIITHKSKFVQFLIVHVCGLENKALESASCQNDQSPAILYRKFASSLIHVIVDPYRATVTRQAAACYLASFVSRASFVCEETCCESVCALLRWGEAYMQSLDSLSV------------------------------HAADAREQCN----------------------------------------FHSLFYTISQAAFYIMCFRGVEAIEFYRKSTKPSSDGFAQPEHLDISPERWTSLCSHPLQPLRYCLESVRNEFLELSKFCHLINAIVYCQLAQDENNVVKRNKRQVTPI--------ATPATLEKERLSGGV----------GGLGKGTNPLDSFFPFDPYLLRKSHVFVDPFYNHW 635

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 147 bits (370), Expect = 3.080e-34
Identity = 147/500 (29.40%), Postives = 214/500 (42.80%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAME---GFDS-QAVIWQRLLTCPL--YPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEE-RSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQD 1479
            L+E VL L+I++ + IDVEIK+ ++ E V           FTMDD +D         + +VDEMADKLD +MLV+F +++    +++    ET+  T                     ET S+   +             +   A + K LL VFE +IL THRSK+ QF+LF+            +S+L+    D   P  TRQS  AYLASFLARA ++  + +  A+  LL+W    +D Y     A   + +     +  E+      R   +S      +   NG                                    R     ++ S  Q   Y++CFRG E+A  +   G++  +++ W+RLL       PL  C  TV  EF              +L+E    +SEE   +V QTI   S+ S       S+ SM  +   T      A  LG+   PL++FFPFDPYLLRRS  YI  +Y  WK  D
Sbjct:  252 LRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEHSAASSSPASVETVAPT---------------------ETSSNEKDVN------------VRQAALIFKHLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVYD----AVHQEQMDQDEVRNGESAAEREERLLEESL-----KMETNG-----------------------------------ERGFQESIYISTLQTVCYLVCFRGLEIATNDDGAGYEFLRSLGWERLLVAGTGYCPLAYCQQTVATEFL-------------NLVETFDLVSEECLERVDQTIGTVSALSIK-----SAKSMERSKKPTAGSAPAATLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 644

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: A0A8K1C8A3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8A3_PYTOL)

HSP 1 Score: 147 bits (370), Expect = 5.260e-34
Identity = 151/502 (30.08%), Postives = 213/502 (42.43%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAME-GFDSQAVI-WQRLLTCPLY--PLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEER-SQVSQTITVGSSFSCSTPRSSSSMSMS----SNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQD 1479
            LQE +  LII+  + +DVEIK+ +  E V           FTMDD +D   D    +  +VDEMADKLD +M+++F Y+D+++  ++S                                   S TL             +E  A++ K LL VFE +IL THRSK+ QF+LFF            +S+L+    D   P  TR S  AYLASFLARA F+  S +  A+  LL+W    +D Y           L  PS                       P   ++  DG GG+ +A  +A+  ++G+                     ++ S  Q   Y++CFRG E+A  E G++    + W+RLL  P    PL  C  TV  EF              +  E    +SEE   QV Q I         + + S SM  +    S +   PS  +    LG    PL++FFPFDPYLLRRS  +I  +Y  WK  D
Sbjct:  251 LQERIFGLIIDHLVAVDVEIKLDEKEEDV-----------FTMDDFLDD--DLLPGDGTQVDEMADKLDQMMVLMFEYIDRQVGRSSS-----------------------------------SATLSN-----------VEQAAQIFKFLLKVFEHSILNTHRSKYPQFLLFFTCQMDPQFQDIFISQLLTASLDPQTPPSTRHSCGAYLASFLARAKFISVSYIQKALYHLLKWMHDQMDVY---------DTLFVPSQ----------------------PDEDSSSVDGRGGI-EAEAAALEPKNGSEPGAFH-------------ESIYISTLQTVCYLICFRGLEVAQAENGYEFLRTLGWERLLITPTSYCPLAFCQQTVATEFL-------------NFAETFDLVSEECIDQVDQAINSVGKLQKRSSKGSKSMERTAPPPSASSMMPSSTSGGSVLGL-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHAD 634

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: G4Z5E9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z5E9_PHYSP)

HSP 1 Score: 145 bits (366), Expect = 1.800e-33
Identity = 154/500 (30.80%), Postives = 217/500 (43.40%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAME---GFDS-QAVIWQRLL--TCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEE-RSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQD 1479
            L+E VL LII++ + IDVEIK+ ++ E V           FTMDD +D        ++ +VDEMADKLD +MLV+F +++Q   A  +    +  ET V            QA L                               + K LL VFE +IL THRSK+ QF+LF+            +S+L+    D   P  TRQS  AYLASFLARA ++  + +  A+  LL+W    +D Y  A      + L    ++  E+      R   +   G                 +AP +A                            ++ S  Q   Y+MCFRG E+A M+   G++S +++ W+RLL  +    PL  C  TV  EF      L++A+   DL      +SEE   +V Q I   S+ S ST       SM  +   T      +  LG+   PL++FFPFDPYLLRRS  YI   Y  WK  D
Sbjct:  266 LRERVLGLIIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDSSRQVDEMADKLDQMMLVMFEHIEQCTAAPDAATDASNEETDV-----------RQAAL-------------------------------IFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDIFISQLLTTSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYQLLKWLHDQMDIYDAAH-----EELDQDETREGESAAEKEERLLERRERG-----------------EAPPAAF------------------------QESIYISSLQIVCYMMCFRGLEIATMDDGAGYESLRSLGWERLLVTSAGYCPLAYCQQTVATEFL----NLVEAF---DL------VSEECLERVDQAIGTVSTLSKSTK------SMERSKKPTAGSAPASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPSYLYWKHAD 646

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: D0NT31_PHYIT (RNA polymerase I-specific transcription initiation factor rrn3, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0NT31_PHYIT)

HSP 1 Score: 144 bits (362), Expect = 5.950e-33
Identity = 153/500 (30.60%), Postives = 218/500 (43.60%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAME---GFDS-QAVIWQRLLTCP--LYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEE-RSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQD 1479
            L+E VL L++++ + IDVEIK+ ++ E            +FTMDD +D         + +VDEMADKLD +MLV+F +++Q   +++   P +     VA   G +     QA L                               + K LL VFE +IL THRSK+ QF+LF+            +S+L+    D   P  TRQS  AYLASFLARA ++  + +  A+  LL+W    +D Y DA+     +  G       ET      R   +S +                     M     R                        +F S  Q   Y++CFRG E+A  +   G+D  +++ W+RLL       PL  C  TV  EF      L++A+   DL      +SEE   +V Q I   SS   ST +S+ SM  S     T    + +  LG+   PL++FFPFDPYLLRRS  YI  +Y  WK  D
Sbjct:  262 LRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAVSSS---PTSASSDSVASSTGDKNLDVRQAAL-------------------------------IFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVY-DAAHQEQQERDG-------ETAAERDERLLEESEN---------------------MGITGDRG-------------------FQESIFISSLQTVCYMVCFRGLEIATSDDGAGYDFLRSLGWERLLVTSGGYCPLAYCQQTVATEFL----NLVEAF---DL------VSEECLERVDQAIGTVSS---STSKSAKSMERSKKP--TAGSASASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 649

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BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Match: A0A0W8CKU1_PHYNI (RNA polymerase I-specific transcription initiation factor RRN3 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKU1_PHYNI)

HSP 1 Score: 143 bits (361), Expect = 1.060e-32
Identity = 152/500 (30.40%), Postives = 225/500 (45.00%), Query Frame = 1

Query:    1 LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVAGEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRPKLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQAPMSAVASRSGAXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAME---GFDS-QAVIWQRLL-TCPLY-PLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEE-RSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQD 1479
            L+E VL L++++ + IDVEIK+ ++ E            +FTMDD +D         + +VDEMADKLD +MLV+F +++Q   + AS  P ++    VA                GD+                     +   A + K LL VFE +IL THRSK+ QF+LF+            +S+L+    D   P  TRQS  AYLASFLARA ++  + +  A+  LL+W    +D Y D +    ++  G  +++  E     R+    +  H    R          G  ++                                +F S  Q   Y++CFRG E+A  +   G++  +++ W+RLL T   Y PL  C  TV  EF      L++A+   DL      +SEE   +V Q I    + S ST +S+ SM  S     T    + +  LG+   PL++FFPFDPYLLRRS  YI  +Y  WK  D
Sbjct:  481 LRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ---SAASSSPASVSSDSVAAN--------------GDKD------------------VDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDIY-DVAHQEQLEREGETAAERDE-----RLLEESEKMHTTGER----------GFQES--------------------------------IFISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFL----NLVEAF---DL------VSEECLERVDQAI---GTVSASTTKSAKSMERSKKP--TAGSASASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 867

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10336.331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FL61_ECTSI	0.000e+0	94.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JAN6_9PHAE	2.010e-215	92.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZI0_ECTSI	1.890e-55	72.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S1ZLF3_9STRA	8.460e-42	28.32	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
B7GDC9_PHATC	1.930e-34	26.94	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
H3GYT5_PHYRM	3.080e-34	29.40	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A8K1C8A3_PYTOL	5.260e-34	30.08	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
G4Z5E9_PHYSP	1.800e-33	30.80	Uncharacterized protein n=1 Tax=Phytophthora sojae...	[more]
D0NT31_PHYIT	5.950e-33	30.60	RNA polymerase I-specific transcription initiation...	[more]
A0A0W8CKU1_PHYNI	1.060e-32	30.40	RNA polymerase I-specific transcription initiation...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	0
Seed ortholog score	902.5
Seed ortholog evalue	8.9e-260
Seed eggNOG ortholog	2880.D7FL61
Preferred name	RRN3
Model size	1527
KEGG ko	ko:K15216
Hectar predicted targeting category	other localisation
GOs	GO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons	9
EggNOG free text desc.	rna polymerase i-specific transcription initiation factor
EggNOG OGs	KOG2434@1,KOG2434@2759
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-19_005380.1
Cds size	1527
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03021

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10336.331.1	prot_Ecto-sp13_S_contig10336.331.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig10336 394..5891 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462524.0363524-CDS-Ecto-sp13_S_contig10336:393..456	1681462524.0363524-CDS-Ecto-sp13_S_contig10336:393..456	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 394..456 +
1681462524.048002-CDS-Ecto-sp13_S_contig10336:928..1045	1681462524.048002-CDS-Ecto-sp13_S_contig10336:928..1045	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 929..1045 +
1681462524.0560582-CDS-Ecto-sp13_S_contig10336:1588..1855	1681462524.0560582-CDS-Ecto-sp13_S_contig10336:1588..1855	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 1589..1855 +
1681462524.064549-CDS-Ecto-sp13_S_contig10336:2263..2419	1681462524.064549-CDS-Ecto-sp13_S_contig10336:2263..2419	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 2264..2419 +
1681462524.074909-CDS-Ecto-sp13_S_contig10336:2802..2985	1681462524.074909-CDS-Ecto-sp13_S_contig10336:2802..2985	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 2803..2985 +
1681462524.0865538-CDS-Ecto-sp13_S_contig10336:3827..4124	1681462524.0865538-CDS-Ecto-sp13_S_contig10336:3827..4124	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 3828..4124 +
1681462524.094149-CDS-Ecto-sp13_S_contig10336:4642..4798	1681462524.094149-CDS-Ecto-sp13_S_contig10336:4642..4798	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 4643..4798 +
1681462524.1021497-CDS-Ecto-sp13_S_contig10336:5161..5392	1681462524.1021497-CDS-Ecto-sp13_S_contig10336:5161..5392	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 5162..5392 +
1681462524.1104312-CDS-Ecto-sp13_S_contig10336:5834..5891	1681462524.1104312-CDS-Ecto-sp13_S_contig10336:5834..5891	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig10336 5835..5891 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig10336:394..5891+
coding sequence from alignment at Ecto-sp13_S_contig10336:394..5891+

protein sequence of mRNA_Ecto-sp13_S_contig10336.331.1

>prot_Ecto-sp13_S_contig10336.331.1 ID=prot_Ecto-sp13_S_contig10336.331.1|Name=mRNA_Ecto-sp13_S_contig10336.331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=509bp
LQESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGT
ADNKKQNTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETPVA
GEEGCEAAAATQAVLQGDETGSDSGTLKGQGGGSTGGMQGMEPVARLLKS
LLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLRDESRP
KLTRQSSVAYLASFLARASFVDPSLVSNAVQSLLEWAGQYLDQYADASIA
TPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGCGGMMQA
PMSAVASRSGAGGSGGVGVGSSSSKSRPADHMLFYSVCQATFYVMCFRGD
ELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLD
RDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSR
VTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDHMYNTWKAQDDGGRHHR
STESSGART

mRNA from alignment at Ecto-sp13_S_contig10336:394..5891+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig10336.331.1 ID=mRNA_Ecto-sp13_S_contig10336.331.1|Name=mRNA_Ecto-sp13_S_contig10336.331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5498bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10336:394..5891+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTACAGGAGAGTGTCCTGAGGCTGATCATCGAGAAAGGTCTCGAGATCGA
CGTTGAGATCAAGGTGGGTGGGTTGGAGTGCGGCCCAGATCGACTGGAGT
GATGCCGCTGTCGGTGTGTTTGTCGAGCATTTCTTGGTTGACGATGATGT
TTGATGCCATTGTGCGTGGCGCGATTTACTGATCTGTCTGCACGCTCGCA
GTCTTTGTTTCGTCGATCATGATTGTGATTGTGATGCTGACGGTTTGTGG
TGTGGGCCAGGGATGATGCTTACGTAGCGTTCTGCACAACCTTCCACACC
TAGGCATTAGATGTTTGATGGCGCACACTGTGATCTGTTGAAACGGACAC
AATCGTCCGTCGGCTATTCATGTACTGTAGTGTGCTCTTAATCTCAGTTG
ATAAATATTTTTCAAACCAACACGATCGTGCTTGGGCTCTTCAAGTGGTG
TGCTTCTCATCTCCGTGGTACGTCTTTTTCAAACAAATACGATCGTGCTT
CGGCTCTTCGTGTGTGCTGTCTCTCCTTCGTTCAGATCATGGACACCGGG
GAGGCTGTGGTCGACGACGAGGACGACGAGTGCGACGCGTTGTTCACCAT
GGACGACGTCGTAGACGGAACCGCCGACAATAAGAAGCAAAACACCGATG
AGGTGAGGAACGCCTCAACCATCATCACCGCCTTGCGTGTGTACGGAATC
AGAGGAGTGAGCTTGGTCGTTGCAGGGGTTGTCGAGGGAGGCTATCGAGT
AGGCAGCGGCCGATGAGGGCGGTTCACGCGACCCGTCGGTGCATCGCCAA
GGGGGATGAGGCCGAGCAAGCTCTTGCTTTCTGTTTGCGTTGCTTCACAT
GATGAGCAAGCTCTGGCTTTCCGTTCGCGTTGCTTCACATGATAAAATCG
TGATTGCAGAGCGGGGTTGAGAGAGGGAGGGAGGGAGAGAGAGAGAGATA
AATAGATATAGAGAGAGAGCCACATGTAGGACGGACGTCACGCCGAGGGA
AGAAGCGAGGGTTGGGAACTAAAAGGCACACCTGCTGGTGCAAGAGCCCA
CGGAATGCCATCTTCCTCAGCGTAAGCGTACATGTGGAAGCGCCCGGCTA
GCATCTAGTCTCGGAGTTACGGGCCTTCCATTCAACCAGGCGTCGATCGG
GAGACAATTGAACCCACGAACAAGTGCACAATGCTGCTGTACCAGGTAGA
CGAAATGGCCGACAAGCTGGACGGTGTCATGCTCGTGGTCTTCAACTACC
TGGACCAGCGCCTTACGGCGAACGCCTCGCTGCCGCCAGAGACAATACTG
GAAACCCCTGTGGCCGGGGAAGAGGGCTGTGAGGCCGCTGCGGCGACACA
AGCCGTCTTGCAGGGAGACGAGACGGGCAGCGACAGTGGTACTCTAAAGG
GACAGGGGGGCGGTTCGACGGGAGGGATGCAAGGGATGGAACCCGTGGCA
CGACTCTTGAAGGTAGGCTCTGTCGTCTCTTCAACGCGTTGCCGGGGCCA
GTTTTCCTCTCGAATTATGCTTGGCTCACTTTGACGAAGGTGCGAAACGA
AAGGTTGGGGTCCTGTTGGTCAGTTTGCGGTCTTGCCATGATATTGATTA
CTTGTAGGCGCAAGGGCAGCAGGGTACGCACGGCTTCTAATACGAGGTGC
AGTTATCAGTCTCTCTTACTGTGCGCCGTAGATTCACGCTGCTAGACAGT
GCATCTACCATCTGATTTGAGGCATTTGGAAGTACGAGGTTCCGGGTGGG
TTGTTTGCTCGTCCACTGCTGTTGCTAATGCTGCTGCTTTAACCCGGCTC
TCGCCGTTTGGTGTTTTTGTACCTCTCGACCTTCTCCCATGGCATGACAT
GGCATGACATAACATGACAGTCTCTTCTGCTGGTCTTCGAGGAGAACATT
CTGCCGACACACCGCAGTAAGTTCGTGCAGTTTGTGCTCTTCTTCGCCTC
CGGCCGTGCGCGCGGGCTAGGCTACGCTCTTGTGTCAAAACTGGTCGGCG
TCTTGAGGGATGAGTCTCGGCCGAAGGTGATGATTCGTGCAGCGCTTGCT
CTTCCTCGCTGAAGGGGCTGACCTCGTTTTAAGAGTTTAGTGGTGCGTTG
CTCCTTTCGGCAAGTGTGGGGAAGTTTGAGTTCAAGCGTGCGGACTGTTG
AAAACTTAAGACCCTGGGTGATCGGATTGATGGCTAGCGCGATGCTGTTC
AATGCTCACGGTCGCGATGGTTTGTTTCGAGTGTAGTCGCAGAGGAGTTG
GACCCTCTAGTGGTTGCATTGATGGGTTTAGATTCGGCATGGCCTACCTT
ACGCATATCCTCCACCCATCCTATCCTATCTTCCTCCTTGTCCACCACCA
AATTTCCCATGCTTATCCCTGTGCTCCATCGAACTCTCGTTTGTTTTCTT
TTTTGTCAGTTGACTCGCCAGAGCAGCGTGGCGTACCTTGCCAGCTTTCT
GGCGAGAGCTTCCTTCGTGGACCCCTCCTTGGTGTCCAATGCCGTACAAT
CGCTCTTGGAGTGGGCAGGGCAGTACTTGGACCAGTACGCCGACGCCTCC
ATAGCAACGCCGGTACAAGCGCTTGGAACTCCGAGCTCGAAGGTGCGCGG
GTTGTGTTGCGTGCCGTACGGTTCGTTGAGCTTCAGTCGCGCTTACCTAA
CCTTACGTAACCTTTCTGGCCAATGGAAGCACGGCTATCTTGACGCGAAA
CCCCGGGTATGAGCATGGCCTTCTACTCTCCAGGCTGCCTCGTTAGCAGG
AGTGGCGCGGAGGAGTTTGTATGTCAAAGTTTTGTCAGGGAAAGGTCTAA
GGTCTGGAATGCGGAAGAGACGTGAAATGGCCGCTGTTGCATTCCTCCTG
CGAGTGCCGCACGTGTACTAGCGTGTCAAAAAGGATTATGTCAGTGTCAT
CAATGTCGATGTCAGTTGTAGCGGCGAAGTCGGCGCTGGTTCGGCGACCA
ATAAATTAAGGAAGGTTTGCCTCAATGGAACAGAAGTCAGCGAAGATGAA
GGGGAAAAACCCTTGTTGGGAGCACCTCGTACATGTCCGTTGGCCCCGTT
GCTGCTACAGTTATTATCGCCATTCAGCCATGCGACAAGACAACGGAGTT
TACAGCCCCCGCGCATGAAAAAACACCCGGTACGTGCGAACGCAGGGTCA
CACCCGAGCGCAAGGACGTGGGCCCGAAAGTGCCATGAATTGATCGAGAG
TTGGTCCAAATGCATTTCCTAATGACGCCACTAGTTTGTTGAGCTACAGT
AGCATCTTGCAACGAAGAGATGCCGATTTGGAACGCTACACCACATGCTC
CTTCGACCCGCTGTTGAATAGACAACGGCCGTCCGGCTCAAGCAAAAAAA
AAACGTCAAACACCTTGAGTTGTAGCCTGCAACCTCTCTGCGTGCCATCA
CAGCCACTACCTCCTTCGCTGCTTCCCCCCTCAGGGGTTCGAGACCCCAG
TGGCGACCCGCGTCCGGGCGAGGCCACAGTCCTGGCACGGAAACCATCCT
CGCCGAAGCGCCAACGGCGGCGACGGATGCGGCGGGATGATGCAGGCACC
GATGTCCGCGGTGGCCTCGAGGTCGGGGGCCGGGGGCAGCGGCGGGGTGG
GCGTCGGCAGCAGCAGCAGCAAGAGTAGGCCGGCGGACCACATGCTCTTC
TACTCGGTGTGCCAGGCGACGTTCTACGTGATGTGCTTCCGGGGGGACGA
GCTCGCCGCCATGGAAGGCTTCGACAGCCAGGTGCGAGGCAAACGCGGTT
GTGGAGCGTGTCGAATTAATCTAGTTGTAACGCGATGGTCAGGAACACGT
GTAGCAGTCGTTGTGGGTATGCGTGCTATCCGTCAATTGTTCCTTCGGCG
TGTTGCGCCTGCATCGATAGGGTGGAGCGGGATTTCTTCGGCCGTCCACG
TGGCGTAACAGCTTGTGGTGACTGAGAAAAAAAACGAGGGATCATGGTCA
GAATATTTGGACGTGTCTCGGACATCGTGCCTTCCGTTTGATGGGTTTTG
GTCCTTTGGGAATCCTGTTTCGCACCGGAACGTGGATTTCCGGTACCCTC
TTATTTCAGGCAGTAGTGAGGACCTGTCAGCACCGCTGCTGTGCACGGCC
CGATATCTGTGCTGCTATGCTGATGATGTCCTACCGATGCAGCAACGGAT
CTCTGATGCGCCAACACCGGACGTGCTTCTCAAATTTAGCCCAACGTGTC
TTTTGCTGTTCCGCATCCCCTGCCGGTGCATGTCTGGGCCCGGGCTCAGG
CGGTGATTTGGCAGCGACTGTTGACGTGCCCGCTGTATCCCCTGCGGCGC
TGTCTGGACACCGTTCGGAGGGAGTTCGCTCGGCTGTGCTGCGGCCTCAT
GGACGCTTACCTGGACCGAGATCTGCTGGAACACCTCGCAGGCATTTCTG
AAGAGGTAGGCTTGCGGGAAAGAAGAAAGCCCCTGCGCTTTGTGGTGTCA
ATTTGGCGGTAGAGCAGGCCCGTGCAGGCGGTGGTGGTATATTGCTGCTG
TGCTTTTTGTCGAAGTACCCTTCGCTGGGGTCGAAGGTTCTTTGCCGGAC
TTTCTCCGCGCTTTATGTGAGCTCCCACGTCGTTTTTTTGAGTTTGCCGG
GAATTCGGCTGCCGGACTCTGCTGAGCAATGCCAGTCATCACGTCTTGGC
ACACCCGGGTGCCTGCGGTATGGTATGATGCTCACATAGTACCGCTCGAA
ACGATCGCCGAAGGCATCATCACAGACTAACGTTTGTTCCGTCCCCCCCT
ACCCGACGGCCCTCGCAGCGGTCGCAGGTGTCGCAGACCATCACTGTCGG
TTCCAGCTTTTCCTGCTCCACGCCGAGATCGTCGTCGTCCATGTCCATGT
CGAGCAACGCCATGTGGACTCCCTCTCGGGTGACCAAGGCTGGCGGCCTG
GGACGCGGGTCGAACCCGCTCGACTCGTTCTTTCCGTTCGACCCGTATCT
CCTACGGAGATCGCACGTGTACATCGACCACATGTACAACACGTGGAAGG
TGCGTTGGGGGGGGGGGGGGGGCGGTTACCGCACAATGCGGTGGTTGGGG
TGAAACCTCCGCATATGTATGCTGCGTCTGGAGCCTTGAAGGAGAGTCGG
TGTTTAGAACTGCTGGTGTTGATGTGCGTCGACGGTTTTCTATTTCGACG
TGTTTCCGTCGGTTTTTGGGAGAGACAGACAGACACCTGGTTCGGAAGTC
GGAAAGTATCTTGTGACGATGTGCTGTTCTTGGTCTGTCTGTTTTCAGTG
GCCCTGAGAGACGACGGCCGTACCTTAACACCTTACCATAGAGAATATTC
AACTCAGAGACGCTTGTGTCGACCGCGCTTACGCCACAACCCAACACAAC
CGGCACGTCCGACACCCAAGCGCATAAAGCCCGTTTCCAACTTCCAATGA
ACAGACACCCAACGCCCCAAACATGATGTTAATCGCGACAGGCTCAAGAC
GATGGCGGCCGACATCACCGAAGCACCGAATCCTCGGGCGCCAGGACG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10336:394..5891+

>mRNA_Ecto-sp13_S_contig10336.331.1 ID=mRNA_Ecto-sp13_S_contig10336.331.1|Name=mRNA_Ecto-sp13_S_contig10336.331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1527bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10336:394..5891+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTACAGGAGAGTGTCCTGAGGCTGATCATCGAGAAAGGTCTCGAGATCGA
CGTTGAGATCAAGATCATGGACACCGGGGAGGCTGTGGTCGACGACGAGG
ACGACGAGTGCGACGCGTTGTTCACCATGGACGACGTCGTAGACGGAACC
GCCGACAATAAGAAGCAAAACACCGATGAGGTAGACGAAATGGCCGACAA
GCTGGACGGTGTCATGCTCGTGGTCTTCAACTACCTGGACCAGCGCCTTA
CGGCGAACGCCTCGCTGCCGCCAGAGACAATACTGGAAACCCCTGTGGCC
GGGGAAGAGGGCTGTGAGGCCGCTGCGGCGACACAAGCCGTCTTGCAGGG
AGACGAGACGGGCAGCGACAGTGGTACTCTAAAGGGACAGGGGGGCGGTT
CGACGGGAGGGATGCAAGGGATGGAACCCGTGGCACGACTCTTGAAGTCT
CTTCTGCTGGTCTTCGAGGAGAACATTCTGCCGACACACCGCAGTAAGTT
CGTGCAGTTTGTGCTCTTCTTCGCCTCCGGCCGTGCGCGCGGGCTAGGCT
ACGCTCTTGTGTCAAAACTGGTCGGCGTCTTGAGGGATGAGTCTCGGCCG
AAGTTGACTCGCCAGAGCAGCGTGGCGTACCTTGCCAGCTTTCTGGCGAG
AGCTTCCTTCGTGGACCCCTCCTTGGTGTCCAATGCCGTACAATCGCTCT
TGGAGTGGGCAGGGCAGTACTTGGACCAGTACGCCGACGCCTCCATAGCA
ACGCCGGTACAAGCGCTTGGAACTCCGAGCTCGAAGGGGTTCGAGACCCC
AGTGGCGACCCGCGTCCGGGCGAGGCCACAGTCCTGGCACGGAAACCATC
CTCGCCGAAGCGCCAACGGCGGCGACGGATGCGGCGGGATGATGCAGGCA
CCGATGTCCGCGGTGGCCTCGAGGTCGGGGGCCGGGGGCAGCGGCGGGGT
GGGCGTCGGCAGCAGCAGCAGCAAGAGTAGGCCGGCGGACCACATGCTCT
TCTACTCGGTGTGCCAGGCGACGTTCTACGTGATGTGCTTCCGGGGGGAC
GAGCTCGCCGCCATGGAAGGCTTCGACAGCCAGGCGGTGATTTGGCAGCG
ACTGTTGACGTGCCCGCTGTATCCCCTGCGGCGCTGTCTGGACACCGTTC
GGAGGGAGTTCGCTCGGCTGTGCTGCGGCCTCATGGACGCTTACCTGGAC
CGAGATCTGCTGGAACACCTCGCAGGCATTTCTGAAGAGCGGTCGCAGGT
GTCGCAGACCATCACTGTCGGTTCCAGCTTTTCCTGCTCCACGCCGAGAT
CGTCGTCGTCCATGTCCATGTCGAGCAACGCCATGTGGACTCCCTCTCGG
GTGACCAAGGCTGGCGGCCTGGGACGCGGGTCGAACCCGCTCGACTCGTT
CTTTCCGTTCGACCCGTATCTCCTACGGAGATCGCACGTGTACATCGACC
ACATGTACAACACGTGGAAGGCTCAAGACGATGGCGGCCGACATCACCGA
AGCACCGAATCCTCGGGCGCCAGGACG