mRNA_Ecto-sp13_S_contig10330.329.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A6H5KFT2_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT2_9PHAE) HSP 1 Score: 144 bits (363), Expect = 7.510e-40 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW Sbjct: 66 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 130
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A507EEJ9_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EEJ9_9FUNG) HSP 1 Score: 95.1 bits (235), Expect = 9.100e-22 Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 FF+LP+ K KIP + GGFTRGYI GGESGS E KEAFSYGYPWP+ + P N+LQGPN W Sbjct: 70 FFALPDDVKNKIPIRAGGFTRGYIPIGGESGSQAVEVKEAFSYGYPWPSTRTPENSLQGPNEW 132
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A397U6D6_9GLOM (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U6D6_9GLOM) HSP 1 Score: 91.7 bits (226), Expect = 4.770e-21 Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 R+FFSLPE K IP K GGFTRGYIG G ESGSH E KEAFSYGY W ++ P N+LQG N W Sbjct: 42 RQFFSLPEEKKNTIPIKSGGFTRGYIGLGNESGSHRFEVKEAFSYGYEWDPNKQPTNSLQGRNEW 106
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A8H4A5N3_GIGMA (Clavaminate synthase-like protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A5N3_GIGMA) HSP 1 Score: 92.0 bits (227), Expect = 1.120e-20 Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 R+FFSLPE K IP K GGFTRGYIG G ESGSH E KEAFSYGY W ++ P N+LQG N W Sbjct: 64 RQFFSLPEEKKNTIPIKSGGFTRGYIGLGNESGSHRFEVKEAFSYGYEWDPNEQPTNSLQGRNEW 128
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A0L0HJP3_SPIPD (Fe2OG dioxygenase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJP3_SPIPD) HSP 1 Score: 91.7 bits (226), Expect = 2.320e-20 Identity = 42/63 (66.67%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 FF+LP+ K KIP + GGFTRGYIG G ESGS E KEAFSYGYPW D P N LQGPN W Sbjct: 96 FFNLPQDIKNKIPIRSGGFTRGYIGLGAESGSSALEVKEAFSYGYPWSLDVAPTNNLQGPNEW 158
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A397TNI1_9GLOM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TNI1_9GLOM) HSP 1 Score: 89.7 bits (221), Expect = 8.370e-20 Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195 R+FFSLP AK IP K GGFTRGYIG GGESGS E KEAFSYGY W N++ N+LQGPN W Sbjct: 63 RQFFSLPSNAKTSIPIKSGGFTRGYIGIGGESGSQRLEVKEAFSYGYEWENNKAKYENSLQGPNEW 128
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A2Z6QUS6_9GLOM (Fe2OG dioxygenase domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QUS6_9GLOM) HSP 1 Score: 89.4 bits (220), Expect = 1.210e-19 Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195 R+FFSLP K IP K GGFTRGYIG GGESGS + E KEAFSYGY W N++ N+LQGPN W Sbjct: 66 RQFFSLPSNIKSSIPIKSGGFTRGYIGMGGESGSQMLEVKEAFSYGYEWENNKTKFENSLQGPNEW 131
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: U9T0D7_RHIID (Fe2OG dioxygenase domain-containing protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=U9T0D7_RHIID) HSP 1 Score: 87.8 bits (216), Expect = 5.720e-19 Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPP-NNALQGPNIW 195 FFSLP K IP K GGFTRGYIG GGESGS L E KEAFSYGY W N++ N LQGPN W Sbjct: 68 FFSLPSNIKSSIPIKSGGFTRGYIGMGGESGSQLLEVKEAFSYGYEWENNKTKFENLLQGPNEW 131
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A7S2RFT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 8.370e-16 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 7 FFSLPEAAKRKIPAKKGGFTRGYIGFGGESGS-HLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 F + A+K + GF+RGY+ FGGESGS + ECKE FSYG+PWP ++ P NALQGPN+W Sbjct: 19 FQGVSPASKASTSLSREGFSRGYVPFGGESGSPEVFECKEGFSYGFPWPMNKKPENALQGPNVW 82
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Match: A0A1Y1YF39_9FUNG (Clavaminate synthase-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YF39_9FUNG) HSP 1 Score: 79.0 bits (193), Expect = 8.680e-16 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 RRFFSLPEAAKRKIPA-KKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPNDQPPNNALQGPNIW 195 R F L + K ++P K GGFTRGYI FGGESGS E KEAFSYGY WP + P+N LQG N W Sbjct: 62 RALFELERSEKDRLPLIKPGGFTRGYIPFGGESGSERLEVKEAFSYGYNWPEGRTPDNGLQGNNEW 127 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10330.329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10330.329.1 >prot_Ecto-sp13_S_contig10330.329.1 ID=prot_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp RRFFSLPEAAKRKIPAKKGGFTRGYIGFGGESGSHLRECKEAFSYGYPWPback to top mRNA from alignment at Ecto-sp13_S_contig10330:4074..4979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10330.329.1 ID=mRNA_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10330:4074..4979+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10330:4074..4979+ >mRNA_Ecto-sp13_S_contig10330.329.1 ID=mRNA_Ecto-sp13_S_contig10330.329.1|Name=mRNA_Ecto-sp13_S_contig10330.329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10330:4074..4979+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |