Homology
BLAST of mRNA_Ecto-sp13_S_contig1033.327.1 vs. uniprot
Match:
D8LR96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR96_ECTSI)
HSP 1 Score: 402 bits (1032), Expect = 4.110e-137
Identity = 198/203 (97.54%), Postives = 201/203 (99.01%), Query Frame = 1
Query: 1 MMAKMANVALVALTLAVGGLAEESRSLASGVWGAWKSERVKSKYFSELLADGDTVELLTHGPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCIVWGTVSGSGFPDDAGAYTSLSGYYVSFGGPSTIGFNKEALSNEEYLTYANGFTAEEVAAFPNDCAISGELTYNRASGDDP 609
MMAKMANVALVALTLA GGLAEESRSLASGVWGAWKSERVKSKYFSELLADGDTVELLTHGPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTC+VWGTVSGSGFPDDAGAYTSLSGYYVSFGGPSTIGFNKEALSN +YLTYANGFTAE+VAAFPNDCAISGELTYNRASGDDP
Sbjct: 1 MMAKMANVALVALTLAAGGLAEESRSLASGVWGAWKSERVKSKYFSELLADGDTVELLTHGPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCVVWGTVSGSGFPDDAGAYTSLSGYYVSFGGPSTIGFNKEALSNVQYLTYANGFTAEDVAAFPNDCAISGELTYNRASGDDP 203
BLAST of mRNA_Ecto-sp13_S_contig1033.327.1 vs. uniprot
Match:
A0A6H5KDL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL7_9PHAE)
HSP 1 Score: 305 bits (781), Expect = 7.240e-100
Identity = 146/153 (95.42%), Postives = 151/153 (98.69%), Query Frame = 1
Query: 130 YFSELLADGDTVELLTHGPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCIVWGTVSGSGFPDDAGAYTSLSGYYVSFGGPSTIGFNKEALSNEEYLTYANGFTAEEVAAFPNDCAISGELTYN 588
YFSELLADGDTVELLT+GPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCIVWGTVSG+G P+DAGAYTSLSGYYVSFGGPSTIGFNKEA+SNE YLTY+NGFTAEEVAAFPNDCAISGELTYN
Sbjct: 2 YFSELLADGDTVELLTNGPFTISAACGTLGGEAEVRLLLTVTADSDADEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCIVWGTVSGNGTPEDAGAYTSLSGYYVSFGGPSTIGFNKEAMSNEAYLTYSNGFTAEEVAAFPNDCAISGELTYN 154
BLAST of mRNA_Ecto-sp13_S_contig1033.327.1 vs. uniprot
Match:
A0A6H5KAA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA8_9PHAE)
HSP 1 Score: 221 bits (562), Expect = 5.220e-67
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1
Query: 271 DEWVYGYPDFLPQDYYNSCVGTTAAGTVSDTCIVWGTVSGSGFPDDAGAYTSLSGYYVSFGGPSTIGFNKEALSNEEYLTYANGFTAEEVAAFPNDCAISGELTYNRASGDD 606
DEWVYGYPDFLPQDYYNSCVGTTAAGTVS T I+WGTVSGSG P+DAGAYTSLSGYYVSFGGPSTIGFNKEALSNE LTYANGFTAEEVAAFPNDCAISGELTYNRASGDD
Sbjct: 38 DEWVYGYPDFLPQDYYNSCVGTTAAGTVSGTGIIWGTVSGSGTPEDAGAYTSLSGYYVSFGGPSTIGFNKEALSNEACLTYANGFTAEEVAAFPNDCAISGELTYNRASGDD 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1033.327.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 4.11e-137 / Id = 97.54 Expect = 7.24e-100 / Id = 95.42 Expect = 5.22e-67 / Id = 93.75 Sequence D8LR96_ECTSI A0A6H5KDL7_9PHAE A0A6H5KAA8_9PHAE back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 1434 Hectar predicted targeting category signal peptide Exons 5 Ec32 ortholog description expressed unknown protein Ec32 ortholog Ec-06_003350.1 Cds size 612
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462523.6396897-UTR-Ecto-sp13_S_contig1033:3118..3940 1681462523.6396897-UTR-Ecto-sp13_S_contig1033:3118..3940 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig1033 3119..3940 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462523.6520753-CDS-Ecto-sp13_S_contig1033:3940..4032 1681462523.6520753-CDS-Ecto-sp13_S_contig1033:3940..4032 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1033 3941..4032 - 1681462523.6612797-CDS-Ecto-sp13_S_contig1033:4590..4676 1681462523.6612797-CDS-Ecto-sp13_S_contig1033:4590..4676 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1033 4591..4676 - 1681462523.6706452-CDS-Ecto-sp13_S_contig1033:5462..5665 1681462523.6706452-CDS-Ecto-sp13_S_contig1033:5462..5665 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1033 5463..5665 - 1681462523.6846352-CDS-Ecto-sp13_S_contig1033:7316..7424 1681462523.6846352-CDS-Ecto-sp13_S_contig1033:7316..7424 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1033 7317..7424 - 1681462523.6933868-CDS-Ecto-sp13_S_contig1033:9389..9512 1681462523.6933868-CDS-Ecto-sp13_S_contig1033:9389..9512 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1033 9390..9512 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1033.327.1
>prot_Ecto-sp13_S_contig1033.327.1 ID=prot_Ecto-sp13_S_contig1033.327.1|Name=mRNA_Ecto-sp13_S_contig1033.327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
MMAKMANVALVALTLAVGGLAEESRSLASGVWGAWKSERVKSKYFSELLA back to top mRNA from alignment at Ecto-sp13_S_contig1033:3119..9512-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1033.327.1 ID=mRNA_Ecto-sp13_S_contig1033.327.1|Name=mRNA_Ecto-sp13_S_contig1033.327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6394bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1033:3119..9512- (Ectocarpus species13 EcNAP12_S_4_19m)ATGATGGCGAAGATGGCCAATGTCGCACTCGTGGCGCTCACCCTGGCGGT
GGGCGGACTTGCGGAGGAGTCTAGGTCCCTCGCATCGGGAGTGTGGGGTG
CGTGGAAGTCCGAGAGGGTGAAG GTGTGTGCCAGGAGAAATGGTTCGGGG
GACTGGGAGCTTTGAGGTTTGATCAAAGGGCAGTGTGGGCTACAAGAATC
TGCACACTGTCGCCAGGAATCCCCCCGCACTAAGGTGTATCAACCAACCC
CCTAAAACCTTGAAGTCAAGAGCCCCATGGGCTTGCAGCCAGCTTCAGCC
TCAAGCCGACCCTTCGTTTTTTGAAAAAAAACTGTTCCGGATGCAGCAAC
AAGCAACAACAGCTCTCTCGCGCGGGCTTGGCGGCTTGGTGGAAAAAACC
ACATCCAAAATGATACTCCCATGTAGAACGCTGCTGGGACCGATACAGAG
ATACAGGTATGCGAGCAAGAAAGCCTGTAGTCTGCGCCAGAACTATGCAG
ATGTTACATCAGGAATGAAATACTCCGCGAGATGGGCCGGCACCAGTGAC
AAAAGATCGTCGCGAGTCGATGTGCAGAGCTGTAGAATACCACGTGGCGC
CGAAGTTGTTGTTTCTAAGGCTGACTCTTGCAACCGCAAGTTGGCCCGAC
GGATTTTTTGGGCTGGCATACCCCGATCCCCCGGATTTGCCACGGATTTG
ACCAAGAGGCAGACCTCTCACCACATCACCACAGAGTTCTCCCTCCATGA
TTGTCGGATCGTCACTAGAGCTTGAAGGCTGTACGCACCACACCTGTAGG
CGTCTTTGAAGCTAGCGGTTAGTACTGTGGGATCTATGTGTGCTGAGAAA
TGTCAATCCATGTGAGTTGAGTAACAATCCGTCTGGAGAATCAGTCGAGG
ATTCTTCGTACCGATTGTTACTTTTGCCGACATGGATTGACATTTCTCAG
CACACATAGATCCCACAGCGGTCACCACTAGCTTCAAAGACGCTTACAGG
TGTGGTGCGTACAGCCTTCAAGCTCTGGTGACGATCCGACAATCATGGAG
GGAGAACTCTGTGGTGATGTGGTGAGAGGTCTGTCTCTTGGTCGAATCCG
TGGCAAATTCGGGGGTCTCTTGGTCGAATCCGTGGCAAATTCGGGGGTTG
GGGGTATGCCAGTCCAAAAAAATCCGCCATTAGAGTCAGCCTAAAAGACT
ACTACTTTTTTTTTTCCCACATCATTACGACGTATGTATCGCGCTCTTAC
AATTCGACATCCTACACATCATTCTGGGGCCTTCCGCCGACATGTTTAGA
TGTTTGACGGGAGCAACCGAGATGTGATTGATTGGTGGGGATCAGGAAAA
GAGACATACCACTCTCTAGAGGTAACTCGCGTTTTTTCGGTGACGATTTT
TGCCTGCCCAATCGGCCGTGTGCATTTGGCCACGCTCGTGTGTCGAACGC
GTTTTTCCTCGAAAGTATGATACATCCGTTCCAAGCATTCTCGACGGCGT
AATCCGTTCCATACCCGCGGTAACGCCACGCTAACCTCGATAAATTACTG
AGGCTCGACAAGCACATGATGTACCGCTGTTAGCAGGAAGAGCCCCTCGA
ATTTTTCCTAGGAAGGAAAACGAAACAAATCCTCTACAGCAGCGTATTTC
AAGTCAACAGGCAGTCTTGAACAATTACCGGTGTGTATCGTATCCGTAAC
GGCAGTCTCAATGATGTCACAATCCTTCCTGCCAGACCATTTCACCGGGG
AGCTCATTACATAACAAGAAACAGACACAAATCTCTCAAGTTCCCTACAA
CATATACCCCATGCGGTGACGTGAAAGTGTGGGCAATTCAAAATCTACGC
TGATGCGTGCATGAACTACAGCAGTACAATAACTCCTCTACCTGTTCACC
ACAGCGCCGCACGACTGCAGGTAGCGTTCCCTGCGAGTTGCCCCTGCTTT
CCGCCGCTGATCCGTTCCATCTGTAGCCGCCCCTGCCTCCTTCCTCACCC
CCTCATTCTTTTTGACGACGTCGACGTCGTTCTTTGTTTGACGTTTTATC
ACCCTCGAAACAACGCGCCACGCAACACAATGTTGTAGTCCAAGTACTTC
TCGGAGTTGTTGGCCGACGGCGACACCGTGGAGCTGCTCACCCACGGACC
TTTCACGATCAGTGCTGCGTGCGGCACCCTCGGAGGCGAAGCGGAG GTGA
GCACCCTGACCGTCATGTTTGTCTCTGACTTGCGTCCCATTTTGTGACTG
TCTCGGCCGTCTTGGTTGTTGTTTTCTGCCGTACTGCATTTGTAGATGAT
ATTGGTTTCTTGTTGATGTGCTTGTGCTGTCGTCTTGACCTTTTCCGACA
ACTTTCAGACGTACGCCCCCGTGCCTCAACTTGTGTTTGGAGTCGATAGT
GTGTTGATTTTTTGTCCCTTTTAAAAAATTATTTCGCGCGCAATGCTGCT
GGTGCCGAGCATGATGGTACCGATAGCGCCCGCAGTTAGGAAAAATTCTG
TCAAGAAAAAAAGGCTCAAGATTTTACGGAAAATAAGAAAAAAGGGCTAA
GAAACATAGCTCAATCTCGACCACAACGTAAGAAACTCCCCAACAAGCTA
CATGGTGGTGCGATCTCCCCATGACATCAGAAATCGATGCTTCCACCCCC
TATAGCCGAACAAGAGCGCATTTTTCTTGTAGAGGGCAGAGTGGTTATTT
TGTTTTTTCGCGCCCCCCCCCCAGCCGCTGTTGCTCACTATGCTACCCTG
TAGTACTGCCTCACATCGCGGTCAACCACGTACTCTCCGCTGTAGTACGG
GTTTGATGGCACTCCCCACCGCCTCTCTTGAGGGCTTGATGAAGTGGATT
GTCAACAGATCAAGAGACAGAAAAAAATGTGAAAAATCCGAAGTACTTCA
AAGGAAAAGGGGATCGGGAGTATGCGCCGTTTCAAAGAATTAAGAAACGC
CATTTAAGAAATGGAAGACTTAGGCCGGTCTTTGACCGAAAATAAGGGAT
TGAGGCTCGACCCGATTTTGACGTTTCTTAACTGCAGGCGCTATCTGTGT
GAGGAACAGCGCTGTCGAATACGCTTTATTACTCCTTTCCGTGAGCTTTT
CGTCGTTACTGTAGCCAAGTCCGCCATGTCTTACCGCTAAGCATTCTCCT
CCATCTTATGCTTTTGGACTGCGAGTCATGCTGGTTGAGGCCCAGTTTGA
ACAAGGTTCGAAAGTCCGAATTAAAACCAAAATCAAGCCCTGACTGGTCG
AAGCCCAAAATTTGGCCCTGTCTGGGTTTGCGCTGAGCTCACTTTTTATT
TCTGGCTTGGACAAAAAATCGTTGCTTGGAGGAAATATCACAACACACGT
AGTCAGAAATCAAGAATCCGAATCAAACTACTTCTTGTTTAAGGCCAACA
CAGCCGTCTTGATTTTTGGTCCTTCGATGTTGACTATTGAACACCGTCCT
GCTATCATTCAACCTCAACTTCAAGCGCACGACGGTTACGCAAGCGCCCC
TCCCATAGTTTTCCCATCAAAAGGTGCCCGTCATGCGCTCACCTACATTA
GTTTCTCCGCCCAACTACGGTAGTCGCAGCCCGCGTTCAAAGGCGACTTT
GGGGTGAAGGACCAGGTGCTTGTTTCATGGGTACTGCTGTGGCATCGAGA
ATAGGCTTCTGCCGTGCACGCTCCACCGATGGGATGTGTGTGTTTTCGAC
CAAGTTACCCTGTGTTTCGTGACAATTTGAACGTCTCTGTGTTCACAGAG
TATTTCGTTATTGCGGGTCCCAACTATGTACCTCTGTACCCGAAACTACC
GAGTAATCTTGGCATCGCGCCGTTCACGGTCGCACCCACACCCTCAGGTT
CGGCTGCTCCTGACCGTTACCGCAGACAGCGACGCCGACGAGTGGGTGTA
CGGATACCCGGACTTCCTTCCCCAGGACTACTACAACTCGTGCGTCGGCA
CCACGGCCGCAGGCACGGTGAGCGACACGTGCATCGTATGGGGCACTGTG
TCAGGCAGTGGTTTCCCGGACGACGCTGGGGCGTACACCTCCCTCTCCGG
GTGAGTTGGTGATGCCTGATTTTTGTGCATGCTTTGTGTAGGATAAGGTT
CGTGCCTCTTGCTTGCAGCGCTTCGTTGACCACTCCCGCGTATTGCTTAG
CTGTACGGATCCGGTGTCATAGGAAGTTGTATGAAAGGTCTCGCTGTTAA
AGTGGTGTTTCTTCGTGGATACTATGCACTGAACCCACGTGAACGTACGT
GATTGGTCATCGGCAAGTTAAACAAGGAAAATGTGTTTTTGGCCCAAATG
TCTGGTCGTGTCTTTGCACTCTACCACATCGCCGCCCGAAGTGCGCGCGT
GCCGATAAGTCGTTCATTGTACGCTGTAGGGTGCGATGTCCGAGTACATG
AATTGTTCACTTCACTTCTAGGTGACAGCCAGTGGCAACTTCACTTTTTC
GAGAGCAGCGACAGCCAGTGGCAACTCGTGACGTTGCTCGTGTCGAGGCC
TTCATACGATTGTGCTCAGACTCGGAGGATGAGGATTATTGCAAGCCAAA
GAGCTCGACCTTGATTTTTGTCTTCATTTGTGCGATTGCTCCAACCTGGG
GTGAATGCCCTACGTTGGATAAAGCATACAGTCAAAGGCCGTTCTTGGCT
GAACCAAGCAGACAAGAGACGCGGAAAAGGGGGCGTCATAAGCACCGCGT
TCACCAAGTATGGCCATTGAACGACTCCAGAGGAGGCACTGTTGTAGCGT
TGTTGTTGGTAAATATTGAAACGTGGGCGTTTCCGTCCGTGCCCAACCGC
ATGCACGCATTGATCAATGGGACGATGGTTGTCCAGGTACTACGTTTCCT
TCGGAGGCCCTTCGACGATCGGCTTCAACAAGGAGGCCCTTTCCAACGAG
GAGTACCTCACCTACGCCAACG GTGAGATGGTCCGACGACATGCTTCCCA
AAAACCTTCATGTGTTTGTTTTCTCCGCGCGCACGGTTTGATGCACGACT
TTGGAACCATTATTGAAAGGCGATGGACGTTCAGTTTGTCCTTGAAGGAT
CGGATTGCCAGTGTATGTAGGTGCTTTCTTCGTCACTACAGTCGTGACTC
AGATACGAGAGGGAGGGCACCTTGTACGGGGGGGCTCCGTTGTAATAGGG
TCGACATTGGTTGTCATGGACTCGACCCGCTTTGTATAGTTGGGTACCCC
TTGCTTCGGTATGAGAGGGGGCTCCGGTGTGAGGGCCAAACGCGTTGGTC
ACACCACCCTCTCTATGTCGGAGCCACGGCTTTACTTGTCACATCATTGA
ACCCGAGGTGAGCCCGTCTCTGCTTTCCGCAGCAGACAATGACTACAGGT
CGTAGACTTGCCTTCTTTGCCTTGAACGCCTGCTGCATCATTCCACTGGA
TGATGACGCTATATTTTTGCCGTATCACTATGCCAAATTGTTTTTGTGCG
TCCCGCCGCCCCGCGGTTGCCCCCTCGTAGGATTCACCGCGGAGGAAGTG
GCTGCTTTCCCTAACGACTGCGCGATTTCCGGCGAGCTGACGTACAACCG
GGCTTCCGGCGATGACCCGTGA TTGGGAGATAACGTTTGAATGTGGGCTT
GCCGGTGTGGTCCTACGGCGTCGACTATTGGTTGGCCTAGTAACGTTTGG
TGTGATGCCACGTGGAGTACACAGCGACTTGGTTGGCTGTCAAGCCCGAT
ACCTCTCCTTGCGAGTTGATTCTGTCGGTGGTGTTCTTCGACGGCTTAGC
GCTGTTAGCGATATGTGGTTGTTCGGAATTTCTTGGTTCTGGGACGAATC
TCTCCGTCCCAGGCGATAGGGTGTTGCCACGGATCGATTAGCGATGGTTT
GTTCAGCCTGCGACCATTTCGGTTGATCTCAAGTGCTGTGAGATTTCAGG
CAACGACTGCTCCATGAAGTTGATCCCTTTGAACATAGAAACATCGTTGC
GGCACCATTTTAGAGCTAAATGTGCTGTTTGATTTGGTCTTATCCTCGCG
CGCGCGCGTGCGTATGCAAGTGCTACAACTGGTTCATGTGTTTGAGACGT
AGGCCCTACCCTTGTGTGGTAGGGAAGATGTGTGCGTTGGTTCGGGTTTT
GCATGGGAAGATCAGGGAGCGCCTGTCGTGTACGGTTCGTGACAAGGGCT
CTCGGGGCTACGCGTGTACTTTCCCTACATGCCCTATTTCCTTGTAGTAA
TATGAGAGATACGTTGGTTATCGTGAGAAAATGTGTTCGGTTCCTGGCGT
ATGCCGCTTGTGCTCTTGTCAAGCTGTTCGACTGCCACCGCCACAAACAT
TACGGGGAGGTTGATATCTTGTCGCGTGGTGCCCGGCTCGCTTCGTTGTG
TCCACTGTTGTGTCCACTCAACAGCTTTTCACGAGCGCACCTAC back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1033:3119..9512-
>mRNA_Ecto-sp13_S_contig1033.327.1 ID=mRNA_Ecto-sp13_S_contig1033.327.1|Name=mRNA_Ecto-sp13_S_contig1033.327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1033:3119..9512- (Ectocarpus species13 EcNAP12_S_4_19m) back to top