mRNA_Ecto-sp13_S_contig10325.323.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10325.323.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI) HSP 1 Score: 140 bits (354), Expect = 3.730e-37 Identity = 73/85 (85.88%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 138 MFGEDSMRECPLERSILGSIIPTLDPDAPQPFRMRKNASFADDAAPPEEPGSKLPLSTGRSGAAEPEGGVPRDRAGGDGGVAVTG 392
MFGEDSMRECPLE SILGSIIPTLDP+ PQPFR RKNASFADD APPEEPG PLSTGR GAAE EGG PRDRAGGDGGVAV+G
Sbjct: 1 MFGEDSMRECPLESSILGSIIPTLDPNPPQPFRKRKNASFADDTAPPEEPGLNPPLSTGRLGAAEAEGGAPRDRAGGDGGVAVSG 85 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10325.323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10325.323.1 >prot_Ecto-sp13_S_contig10325.323.1 ID=prot_Ecto-sp13_S_contig10325.323.1|Name=mRNA_Ecto-sp13_S_contig10325.323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp MKPLYHDRAEKIAVTFTQNPSASQTADHNNCSSDSGTALAPPMFGEDSMRback to top mRNA from alignment at Ecto-sp13_S_contig10325:2555..4300+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10325.323.1 ID=mRNA_Ecto-sp13_S_contig10325.323.1|Name=mRNA_Ecto-sp13_S_contig10325.323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1746bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10325:2555..4300+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10325:2555..4300+ >mRNA_Ecto-sp13_S_contig10325.323.1 ID=mRNA_Ecto-sp13_S_contig10325.323.1|Name=mRNA_Ecto-sp13_S_contig10325.323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=381bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10325:2555..4300+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |