Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 860 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 432 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462523.1880615-UTR-Ecto-sp13_S_contig10323:1361..1789 | 1681462523.1880615-UTR-Ecto-sp13_S_contig10323:1361..1789 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10323 1362..1789 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462523.1967154-CDS-Ecto-sp13_S_contig10323:1789..2221 | 1681462523.1967154-CDS-Ecto-sp13_S_contig10323:1789..2221 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10323 1790..2221 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10323.321.1 >prot_Ecto-sp13_S_contig10323.321.1 ID=prot_Ecto-sp13_S_contig10323.321.1|Name=mRNA_Ecto-sp13_S_contig10323.321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
MHPMQKHGCVRRGGTNPVCEDLIVCIISRSIGEALENPMTGTRSAGGEGA
GCWVMFAISPHRCTYMCGPNRHVYLVSGLFVPPRDTTISPPAVRYFYLVQ
QQPFPTVVSTTSPPSRTSGEYTLLQLLAADPGTLADSTQNAASS back to topmRNA from alignment at Ecto-sp13_S_contig10323:1362..2221+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10323.321.1 ID=mRNA_Ecto-sp13_S_contig10323.321.1|Name=mRNA_Ecto-sp13_S_contig10323.321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=860bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10323:1362..2221+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCACGCATTCCACGATTTTGATCGCAGGTTTGTCGGCCGTCGGATTGCCA
GAGTTTTTATGTGGTTGGGGCGGAACTTTTCGAACAGGCGGACTTTCTCT
ACAGCAGCGCCCATAATAAAGGACCCTCAGCACGGTTACAATGTAGCCGC
ATCACGAAGTCTCCATCAACCACGTATGCAAATCCCGCTGGAGAGCATAC
AAGATCACAGACCCGCACGTGCGATTCAAAAGTCAATCGCCATGCTACGC
AACGATTCTAATTTTCACTTCCACAAGCACAGCCACCACCTCCTTATCAA
CCACGCGGTACGAGTCCTTCCTTGGCTCCGAGGAAACCAAATGGTTGTCG
CCGAAGTCTTCCGAGATCCCCTCGCCAAGCATGATGGCAAAAGACAGCGA
AACGCATAAGCATATAAAGGTATAGACGATGCATCCTATGCAGAAACACG
GATGCGTCCGTCGTGGCGGGACGAATCCGGTGTGTGAGGATCTCATTGTC
TGCATCATCTCCCGATCAATAGGTGAAGCCTTAGAAAACCCCATGACTGG
AACTAGAAGTGCAGGAGGTGAGGGGGCTGGCTGCTGGGTGATGTTCGCGA
TATCGCCGCATCGCTGTACATATATGTGCGGTCCGAATCGGCACGTGTAC
TTGGTTTCCGGCTTGTTTGTTCCTCCTCGGGACACAACAATTTCGCCGCC
AGCAGTTCGGTACTTCTACTTGGTACAGCAACAGCCGTTCCCAACAGTTG
TATCTACCACGTCGCCGCCTTCGAGAACAAGCGGCGAATACACGCTCCTA
CAGCTGCTGGCTGCTGACCCTGGGACGCTCGCTGATAGCACGCAAAATGC
CGCATCATCT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10323:1362..2221+ >mRNA_Ecto-sp13_S_contig10323.321.1 ID=mRNA_Ecto-sp13_S_contig10323.321.1|Name=mRNA_Ecto-sp13_S_contig10323.321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=432bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10323:1362..2221+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCCTATGCAGAAACACGGATGCGTCCGTCGTGGCGGGACGAATCC
GGTGTGTGAGGATCTCATTGTCTGCATCATCTCCCGATCAATAGGTGAAG
CCTTAGAAAACCCCATGACTGGAACTAGAAGTGCAGGAGGTGAGGGGGCT
GGCTGCTGGGTGATGTTCGCGATATCGCCGCATCGCTGTACATATATGTG
CGGTCCGAATCGGCACGTGTACTTGGTTTCCGGCTTGTTTGTTCCTCCTC
GGGACACAACAATTTCGCCGCCAGCAGTTCGGTACTTCTACTTGGTACAG
CAACAGCCGTTCCCAACAGTTGTATCTACCACGTCGCCGCCTTCGAGAAC
AAGCGGCGAATACACGCTCCTACAGCTGCTGGCTGCTGACCCTGGGACGC
TCGCTGATAGCACGCAAAATGCCGCATCATCT back to top
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