mRNA_Ecto-sp13_S_contig10316.314.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: D8LQY6_ECTSI (Ap4A phosphorylase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY6_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 2.140e-145 Identity = 211/221 (95.48%), Postives = 214/221 (96.83%), Query Frame = 1 Query: 1 QDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGAS 663 +DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDE IS LVGSSRDFSRVWRLP FRFQHAFTLLPSLQELGEEG GDD P RRMAAHL+TRYV+LLREVGFDTSSLLAQEPTRTPGDA ASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGAS Sbjct: 284 EDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDEPISRLVGSSRDFSRVWRLPTFRFQHAFTLLPSLQELGEEGSGDDDPSRRMAAHLKTRYVELLREVGFDTSSLLAQEPTRTPGDATASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGAS 504
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A6H5L694_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.010e-143 Identity = 213/222 (95.95%), Postives = 214/222 (96.40%), Query Frame = 1 Query: 1 QDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGASR 666 +DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDE IS LVGSSRD SRVWRLP FRFQHAFTLLPSLQELGEEG GDD P RRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAAST PVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGASR Sbjct: 442 EDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDEPISRLVGSSRDLSRVWRLPTFRFQHAFTLLPSLQELGEEGVGDDDPSRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTAPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGASR 663
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.360e-28 Identity = 87/240 (36.25%), Postives = 120/240 (50.00%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAA-NEAIPVDESIS------GLVGSSRDF-SRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAA---------------ASTV-PVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVT 651 DF AWY VV VGF+NSA +AGASQRHKHMQ++P L + P + +P+D +IS V ++ D + ++RLP F+F+H TLLP L G L Y LLR G + PGD A STV P + L P+N +LT RW+++VPR+R G++VNG+GF+G+LLV G+G G + ++VL VT Sbjct: 1309 DFAAWYAVVAAADAVGFFNSAAEAGASQRHKHMQLVP---LASFAPCTQSRGLPIDSAISMATARTSTVTAANDSEAAIFRLPNFKFKHGLTLLPPESALLH---GXXXXXXXAGMPLLAIYSALLRRTGL-------LDCAAAPGDCAFAGGAGSSGCGDSGGGSTVAPAAALAPHNVLLTTRWMLVVPRARAGCAGVNVNGLGFMGSLLVHAD---GDGGGAGGAPDVKPMSVLSCVT 1532
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: UPI000E245E60 (phosphorylase n=1 Tax=Trinickia diaoshuihuensis TaxID=2292265 RepID=UPI000E245E60) HSP 1 Score: 111 bits (277), Expect = 7.280e-26 Identity = 73/189 (38.62%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVR 570 DF AW+ + E G+GFYN DAGASQ HKH+Q++P L D EAIP+D L+ ++ + S + RLP F+HAFT L G G + P R RY LL VG + G A S PYN +LTP+W++LVPRS + GI VN +GF G+L V+ Sbjct: 119 DFAAWFACLNEFDGLGFYNGGRDAGASQPHKHLQIVPL-PLGD----GGEAIPIDT----LIDATANESAIVRLPGLPFEHAFTRLTP-------GSGSEMP-----EQARERYRALLHTVGLGAIDVA--------GRAHQSA-------PYNLLLTPKWMLLVPRSAEQVDGIAVNALGFAGSLFVK 271
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A522MVJ4_9BURK (Phosphorylase n=1 Tax=Paraburkholderia sp. TaxID=1926495 RepID=A0A522MVJ4_9BURK) HSP 1 Score: 103 bits (257), Expect = 5.970e-23 Identity = 74/192 (38.54%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDE-SISGLVGSSRDFSRVWRLPIFRFQHAFT-LLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRD 573 DF AW ++E G+GFYN +AGASQ HKHMQV+P L D + A +D S GL+G+ LP F F+HAFT L P PL + AA RY LL VG + S+ + V PYN +LTPRW++LVPRS + GI VN +GF G+L V++ Sbjct: 121 DFTAWLACLDEFDGLGFYNGGREAGASQPHKHMQVVPL-PLGDAGLSLPIAPLLDAASFDGLIGT---------LPGFPFEHAFTQLTPG-------------PLEQAAAQALERYQMLLDAVGVGSVSVDGR---------------VHQGAPYNLLLTPRWMLLVPRSSEDAAGISVNALGFSGSLFVKN 274
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A7W6YZU8_9BURK (ATP adenylyltransferase n=9 Tax=Paraburkholderia TaxID=1822464 RepID=A0A7W6YZU8_9BURK) HSP 1 Score: 99.0 bits (245), Expect = 3.960e-21 Identity = 73/218 (33.49%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLL---PSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGV 648 DF AW+ + E GVGFYN AGASQ HKH+Q++P P A P+ I ++GS R R+ ++P F+HA L P+ + D Y A LR VD G+ S PYN ++TP+W++LVPR+ GI VN +GF G+L VRD A + VR G + VLE V Sbjct: 131 DFAAWFTCLAEFDGVGFYNGGAQAGASQLHKHLQIVP-------LPLAESGPPLP--IESVLGSVRMEGRIGKVPGLPFRHAIAYLERVPAESSQAAQEALDCYHALLDAVGLRAIEVD---------------------GELHPSA-------PYNLLVTPQWMLLVPRTLERVEGISVNALGFAGSLFVRDTAQ------MQIVRRLGPMTVLERV 305
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: UPI0018827A83 (Phosphorylase n=1 Tax=cf. Phormidesmis sp. LEGE 11477 TaxID=1828680 RepID=UPI0018827A83) HSP 1 Score: 95.5 bits (236), Expect = 1.280e-20 Identity = 73/217 (33.64%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLL--PSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGV 648 DF A + + E+ G+GF+N AGASQ HKH+Q++P L D +P++ +I + S D + R P+ F+HA T PSL +L + + +A Y LL VG +S + G ++ PYN + T W+M+VPRSR + GI VN +GF G+LLV+DKA +A +R+ G L +LE V Sbjct: 26 DFAALGQCLGEVDGLGFFNGGKVAGASQPHKHLQIVP---LVDME------LPMEVAIEQAIAHSAD-QMIVRSPLLPFEHAITSFNFPSL-DLTDYSTTPTPSTQSLAQRYLDHYQRLLDAVGIRSS----RHSVNGWGGTQSA--------PYNLLCTRNWMMVVPRSREGYAGISVNSLGFAGSLLVKDKAQ------LAQLRQLGPLKLLEQV 213
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: M1VK29_CYAM1 (Similar to Ap-4-A phosphorylase II n=2 Tax=cellular organisms TaxID=131567 RepID=M1VK29_CYAM1) HSP 1 Score: 97.4 bits (241), Expect = 2.540e-20 Identity = 68/202 (33.66%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTRYVDLLR----EVGFDTSSLLAQEPTRTPGDAAASTVPVSTLP-----PYNAVLTPRWLMLVPRSRREW-GGIDVNGMGFLGALLVRDKA 579 D A + + + PG+GFYNS AGASQRHKH+Q+IP A EA+P+ E + S + + + +P F+HA + +L E D + A + +RY+ LL E+G SS +A E A+A P + PYN +LT W+MLVPR ++ G I VN +GF G LL ++++ Sbjct: 144 DCTAIWHCLRQYPGLGFYNSGKVAGASQRHKHLQLIP--------VAGVEAVPIHEKVEEAARSREEQTGCFVVPALPFKHAII---GMHDLYSESKSD----AEIGAAMHSRYMQLLHFTIEELGVPASSWMAWEARSHHPPASAVGHPANDSETAHPFPYNLLLTSNWMMLVPRRHEKFLGDISVNALGFAGFLLAKNES 330
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A1N6LPU5_9BURK (ATP adenylyltransferase n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1N6LPU5_9BURK) HSP 1 Score: 95.9 bits (237), Expect = 4.990e-20 Identity = 70/194 (36.08%), Postives = 90/194 (46.39%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAAN-EAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTR-YVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKA 579 DF AW + E G+GFYN DAGASQ HKH+Q++P L + PA E++ + G +G+ LP F HAF L E G R AAH Y+ LL G + G+ S PYN ++TPRW++LVPRS GI VN +GF G+L VRD A Sbjct: 124 DFAAWVACMAEFDGLGFYNGGADAGASQPHKHLQIVPL-PLGESGPAVPIESVMESACMEGPIGT---------LPGLPFSHAFAYL-------ERGPAAS----RHAAHAALDCYLALLEAAGLRAIEVN--------GELHQSA-------PYNLLITPRWMLLVPRSSERVEGISVNALGFAGSLFVRDAA 281
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Match: A0A160FUZ8_9BURK (Phosphorylase n=1 Tax=Paraburkholderia phytofirmans OLGA172 TaxID=1417228 RepID=A0A160FUZ8_9BURK) HSP 1 Score: 94.4 bits (233), Expect = 1.830e-19 Identity = 67/193 (34.72%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 4 DFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDESISGLVGSSRDFSRVWRLPIFRFQHAFTLLPSLQELGEEGGGDDYPLRRMAAHLRTR-YVDLLREVGFDTSSLLAQEPTRTPGDAAASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKA 579 DF AW + E G+GFYN DAGASQ+HKH+Q++P P E+I + G +G+ +P F+HAF L G + AAH Y LL VG S + G+ S PYN ++TPRW++LVPR GI VN +GF G+L VRD A Sbjct: 124 DFAAWIACMAEFDGLGFYNGGADAGASQQHKHLQIVPLPLGESGPPLPVESILESACMDGPIGT---------IPGLAFRHAFA------HLEPAPAGSTH-----AAHAALDCYHALLAAVGLRASEVN--------GELHQSA-------PYNLLVTPRWMLLVPRFSERVEGISVNALGFAGSLFVRDAA 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10316.314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10316.314.1 >prot_Ecto-sp13_S_contig10316.314.1 ID=prot_Ecto-sp13_S_contig10316.314.1|Name=mRNA_Ecto-sp13_S_contig10316.314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp QDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANback to top mRNA from alignment at Ecto-sp13_S_contig10316:1436..5659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10316.314.1 ID=mRNA_Ecto-sp13_S_contig10316.314.1|Name=mRNA_Ecto-sp13_S_contig10316.314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4224bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10316:1436..5659- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10316:1436..5659- >mRNA_Ecto-sp13_S_contig10316.314.1 ID=mRNA_Ecto-sp13_S_contig10316.314.1|Name=mRNA_Ecto-sp13_S_contig10316.314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10316:1436..5659- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |