mRNA_Ecto-sp13_S_contig10301.308.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI) HSP 1 Score: 340 bits (873), Expect = 3.250e-114 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 3 Query: 222 MMRLLAMVWVCLMAVLTSAHNPTAGGGGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEEVDEA 707
MMRLLAMVWVCLMAVLTSAHNPTAGGGGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEEVDEA
Sbjct: 1 MMRLLAMVWVCLMAVLTSAHNPTAGGGGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEEVDEA 162
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK) HSP 1 Score: 192 bits (489), Expect = 1.490e-56 Identity = 88/126 (69.84%), Postives = 106/126 (84.13%), Query Frame = 3 Query: 309 HKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDV 686
H +SLG+RDSIMIAHSF+G +FGPAQ+MHGATYTVD EF+ + LV+K NWVVDIG ASE+L+ VL KYNFKNLNE+FP NTTTEFMCK IFD++AA C ++F G++C+KL ESHKAW Y GDV
Sbjct: 26 HAKFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAA-CLENFKGSMCVKLHESHKAWASYTGDV 150
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.450e-56 Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 3 Query: 249 VCLMAVLTSAHNPTAGGGGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYE 677
+C+M L AH KGY+LG++DSIMIAHSF+G +FGPAQ++HGATYTVD EF D L K NWV+DIG ASE+L VL+KYNFKNL+E+FP NTTTEFMCKVIFD+++A+ F G+L +KLWESHKAW Y+
Sbjct: 16 LCIMFTLAYAHK---------KGYTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANKFKGSLSVKLWESHKAWASYQ 149
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.280e-52 Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 3 Query: 318 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGE 692
Y+LGIRDSIMIAHSF+G +FGPAQ+MHGATYT D EF L NWV+DIG AS ML+ VL++YNFKNLNE+FP +NTTTEFMC+ IFD +A C F GT+ +KLWESHKAW YEG V +
Sbjct: 10 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVAD 134
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC) HSP 1 Score: 178 bits (452), Expect = 1.680e-50 Identity = 80/131 (61.07%), Postives = 97/131 (74.05%), Query Frame = 3 Query: 303 GGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEE 695
GG + YSLG+RDSIMIAHSF G +FGPAQ MHGATYTVD EF ++L + NWV+DIG ML VL +YNFKNLNE+FPG+NTTTEFMCK IF+ L + F G++ +KLWESH AW Y D+G +
Sbjct: 58 GGGERYSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGKFKGSITVKLWESHSAWASYTNDIGAD 188
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA) HSP 1 Score: 173 bits (438), Expect = 8.770e-49 Identity = 83/132 (62.88%), Postives = 103/132 (78.03%), Query Frame = 3 Query: 318 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELAA-------KCGKD-FHGTLCIKLWESHKAWGCYEGDV 686
+SLGIRDSIMIAHSF+G QFGPAQ +HGATYTVD F++ LV K+NWV+DIG AS L+ +LSKYNFKNL+++FP G+NTTTEFMC+ I +LAA K ++ F G++C+KLWESHKAW CYE V
Sbjct: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A7S2A892_TRICV (6-pyruvoyltetrahydropterin synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A892_TRICV) HSP 1 Score: 161 bits (408), Expect = 4.500e-44 Identity = 76/128 (59.38%), Postives = 98/128 (76.56%), Query Frame = 3 Query: 318 YSLGIRDSIMIAHSFEG-PQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELAAKC---GKDFHGTLCIKLWESHKAWGCYEGDV 686
++LG+RDS+MIAHSF G P FGPA MHGATYT D EF+T L + NWV+DIG AS++L +VLS+YN KNL+E+FP G+ TTTEFMC+VI ++L + G +F G + +KLWESHKAWG Y G+V
Sbjct: 58 FALGVRDSLMIAHSFHGHPSFGPAGGMHGATYTCDVEFRTSHLHPECNWVIDIGLASDVLTSVLSRYNMKNLDEVFPDGEMTTTEFMCRVIHEDLCRRLKEEGAEFEGEIRVKLWESHKAWGSYVGEV 185
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: B7FYC8_PHATC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYC8_PHATC) HSP 1 Score: 158 bits (399), Expect = 4.010e-43 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 312 KGYSLGIRDSIMIAHSFEG-PQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELAAKCGK---DFHGTLCIKLWESHKAWGCYEGDV 686
+ + LGIRDS+MIAHSF P FGPA MHGATYT D EF D L +NWV+DIG ASE+L VL+KYN KNL+E+FP GQ TTTEFMCK I +L + DFHG +C+KLWESHKAW Y G V
Sbjct: 26 RSFRLGIRDSLMIAHSFHRHPAFGPAGGMHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDLVDLIRREFHDFHGEVCVKLWESHKAWAAYSGVV 155
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A7S4K2E3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2E3_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.260e-43 Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 3 Query: 318 YSLGIRDSIMIAHSFEG-PQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELAAKCG---KDFHGTLCIKLWESHKAWGCYEGDV 686
++LG+RDS+MIAHSF G P FGPA MHGATYT D EF+ L + +NWV+DIG ASE+L+ +LSKYN KNL+E+F G+ TTTEFMCKVI +A + KDF G + +KLWESHKAW YEG+V
Sbjct: 78 FTLGVRDSLMIAHSFHGHPAFGPAGGMHGATYTCDVEFRCKDLAQVTNWVIDIGKASEILSDILSKYNLKNLDEVFSNGEMTTTEFMCKVIHQGVAQRVREEVKDFKGEISVKLWESHKAWASYEGEV 205
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Match: A0A7S0WCE1_9CRYP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCE1_9CRYP) HSP 1 Score: 158 bits (400), Expect = 7.390e-43 Identity = 75/130 (57.69%), Postives = 93/130 (71.54%), Query Frame = 3 Query: 300 GGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKD-FHGTLCIKLWESHKAWGCYEGDV 686
GG +GY+LG+RDSIMIAHSF+GP+FGPAQ MHGATYTVD E + L +K NWVVDIG +L VL YN+KNL+E+FPG NTTTEFM + I + +AA K G++ +KLWESH AW Y +
Sbjct: 59 GGQQEGYTLGVRDSIMIAHSFKGPEFGPAQGMHGATYTVDLEVSVEKLADKLNWVVDIGVLLGILKEVLGVYNYKNLDEVFPGVNTTTEFMSQKIHEGVAAALKKHGVVGSMSVKLWESHNAWATYSNKI 188 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10301.308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10301.308.1 >prot_Ecto-sp13_S_contig10301.308.1 ID=prot_Ecto-sp13_S_contig10301.308.1|Name=mRNA_Ecto-sp13_S_contig10301.308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp MAELRHCRHSRTVPPPRRRRGIQNQTRTPKKATWALIGESEGISCMTYTYback to top mRNA from alignment at Ecto-sp13_S_contig10301:1692..4708+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10301.308.1 ID=mRNA_Ecto-sp13_S_contig10301.308.1|Name=mRNA_Ecto-sp13_S_contig10301.308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10301:1692..4708+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10301:1692..4708+ >mRNA_Ecto-sp13_S_contig10301.308.1 ID=mRNA_Ecto-sp13_S_contig10301.308.1|Name=mRNA_Ecto-sp13_S_contig10301.308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=684bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10301:1692..4708+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |