mRNA_Ecto-sp13_S_contig103.302.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A6H5JYC7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC7_9PHAE) HSP 1 Score: 632 bits (1630), Expect = 2.970e-226 Identity = 314/329 (95.44%), Postives = 322/329 (97.87%), Query Frame = 1 Query: 58 MGLRVIEPRVGVTLTVMSLALLCMLRRVAAFRSGSIAALSRTMCKQRGQTARGDCATAGRHAGPEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGSD 1044 MG+RVIEPRVGVTLTVMSLALLCMLRR AFRSGSIAALSRT+CKQRGQTARGDCA AGRHAGPEGT+LPG+MHRTV AEELKAEVIVVGDIHGCY EMVSLLERCGYRLGN+EDRERFSVVLAGDLVNKGPGSV+VVRTAR+EGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPS GCIIVHAGLVPGVPLNGQDAEAMSCMRNVVE+EGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK AGSD Sbjct: 1 MGVRVIEPRVGVTLTVMSLALLCMLRRGVAFRSGSIAALSRTLCKQRGQTARGDCAAAGRHAGPEGTDLPGVMHRTVSAEELKAEVIVVGDIHGCYGEMVSLLERCGYRLGNKEDRERFSVVLAGDLVNKGPGSVDVVRTAREEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSLGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEMEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK-AGSD 328
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: D7FQU8_ECTSI (Putative bis(5\'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU8_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.800e-65 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1 Query: 742 MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGSD 1044 MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK+AGSD Sbjct: 1 MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKKAGSD 101
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A8K1FHR1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHR1_PYTOL) HSP 1 Score: 204 bits (520), Expect = 2.110e-59 Identity = 119/255 (46.67%), Postives = 157/255 (61.57%), Query Frame = 1 Query: 262 LPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPW--VEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGG----GYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAP 1008 LP MH V L + VI+VGDIHGC+ E+V LL E D + +++L GDLVNKGP S VV+ ARQ+ L VRGNHD+ AL+A ++ K G G A P + V+ S +D++++ LP+T+S P+ +IVHAG+ PGV L GQ M MR +E E +E + + + WA WKGP+H+YFGHDAK G Q+EAFATGLDTGC YGR LTA++LP R +V V A A +SAP Sbjct: 15 LPSRMH-LVADIPLTSRVIIVGDIHGCFDELVELLAVA------EFDESKDTLILVGDLVNKGPKSPEVVQFARQKNALCVRGNHDDAALSAY-----YAWKSG-GDDALPAKYGYVKSFSEEDIRYLEELPFTISLPAQNAMIVHAGIKPGVALEGQHPIDMYKMR-FLEYESTNEEPAAFEVKPSDSEVVQWATQWKGPQHIYFGHDAKAGLQQEAFATGLDTGCCYGRQLTAIILPTRELVAVKARAQYSAP 255
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A4D9DA84_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA84_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.230e-56 Identity = 121/276 (43.84%), Postives = 154/276 (55.80%), Query Frame = 1 Query: 247 PEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGG-----GYEPRTLPDQGLA--WAKAW--KGPE-----------HVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGG 1014 P GT +P +HR + +E K V+VVGD+HGC E+ +LL + Y + SVVL GDLVNKGP S V+ R +GF +VRGNHD+ ALAA VG+F+ G + +V L D+ W+ +LPYTLS G ++VHAGL+PG PL Q A MS +R+V E GG G E +P+ G A WAK W +G E H+ FGHDAKRG Q ATGLDTGC YGR LT +LPG + V A + P G Sbjct: 90 PAGTRMPACVHRILTRDEAKERVLVVGDVHGCLEELQALLVKANYTAAKD------SVVLVGDLVNKGPLSAETVKWCRTQGFYSVRGNHDDSALAAYFRVGKFT---GVSSLPQAYDFVAALDEADVAWLDSLPYTLSIEHLGVVVVHAGLLPGRPLQMQQAADMSRIRSVKRAEEGGEGTWVGVE--YIPENGEAEPWAKVWSQEGKECEGGEGSTDARHLLFGHDAKRGLQVFRKATGLDTGCCYGRELTLAILPGEERISVKALKAYQVPHG 354
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A813JGW0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGW0_POLGL) HSP 1 Score: 197 bits (502), Expect = 3.030e-56 Identity = 115/264 (43.56%), Postives = 152/264 (57.58%), Query Frame = 1 Query: 247 PEGTELPGIMHRTVGAEEL----KAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQG-LAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVL-----PGRRVVCVPAEAMWSAP 1008 P GT LP I HR V E+ +++VGD+HGC E+ SLL+ + D+ R ++VL GDLVNKGP S V+ AR G VRGNH++ L A GVGR++ G G+ Q+ ++ ++W+ LP+TLS P ++VHAGL+PGVPL Q + M +R+V + G+E P +G +WAK W GPEHV FGHDAKR Q FATGLDTGC YG LTA+V+ RR V A + SAP Sbjct: 29 PSGTPLPLISHRRVERHEVCNQPGGRLLIVGDVHGCAEELRSLLKAESF------DKGRDTLVLVGDLVNKGPSSGEVIAIARDNGAFCVRGNHEDELLEAWHGVGRYA----NGLGSYRQNAKGQVDAEAVRWVQELPFTLSLPWLKLVVVHAGLIPGVPLEKQKVKDMMWVRDVRPSDSDAGWEGLETPQEGSYSWAKVWSGPEHVVFGHDAKRKLQTHEFATGLDTGCCYGFQLTALVVNPDDASDRRFVHAQAGKVHSAP 282
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A5D6Y7R9_9STRA (Metallophos domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7R9_9STRA) HSP 1 Score: 197 bits (501), Expect = 3.900e-56 Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 1 Query: 262 LPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAA----ATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGY-EP----RTLPDQGLA--------WAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGS 1041 LP ++HR V A V+VVGD+H C E+ LL C + R ++VL GDLVNKGP V VVR AR+ L VRGNHD+ ALAA TG G + + +VEQLS +D++++ LP+TL+ P+ I+VHAGLVPGVPL+ Q M MR + ++ GG EP L + A WA W+GP+HV+FGHDA G Q+EAFATGLDTGC YGR LTA +LP R +V V A ++ AGS Sbjct: 20 LPAVVHR-VAELPATARVVVVGDVHACADELQLLLRACAFNAA------RDTLVLVGDLVNKGPKPVEVVRFAREANALCVRGNHDDAALAAYYAWRTGGGARDASDSKYR------YVEQLSPEDVRFLEELPFTLTLPAQNAIVVHAGLVPGVPLHAQRPLDMYKMRFIEPVDQDGGIDEPVREWAALETRAAAREAGQLFQWATQWRGPQHVFFGHDAVPGLQREAFATGLDTGCCYGRQLTACILPAREIVQVQALRAYAPAANDGAVNTAGS 283
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: R1ELE4_EMIHU (Metallophos domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELE4_EMIHU) HSP 1 Score: 195 bits (496), Expect = 1.950e-55 Identity = 120/276 (43.48%), Postives = 151/276 (54.71%), Query Frame = 1 Query: 223 ATAGRHAGPEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAA-----ATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWK-------GPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGG 1014 A R + P +P HR + E + I+VGD+HGC E+ SLL+ CG+ D VVL GDLVNKGP S V AR+ GF VRGNHD+ AL A G K E A WV+ L DL ++ LP+TL ++VHAG+VPGVPL Q AE M+ MRN+V +GGG + + G+AWA+ W+ G HV FGHDAKR Q+ ATGLDTGC YG LTA+VLP R+V V A ++ PGG Sbjct: 27 AVPARRSPPRRCHVPPESHRVLVTRE-GSRTILVGDVHGCLDELKSLLQACGF------DASTDHVVLVGDLVNKGPHSAETVAYARESGFACVRGNHDDAALFAHEARTEAGARGSDSKYSELKYA----WVDALGEADLAFLRELPHTLRLEREEVLVVHAGVVPGVPLAEQRAEDMTTMRNLVRADGGGWWAAASA-SAGVAWAEEWRPEPTVVAGVRHVVFGHDAKRRLQRHEHATGLDTGCCYGGELTALVLPEWRLVAVDAGREYTVPGG 290
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: UPI000719B5AA (serine/threonine-protein phosphatase 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B5AA) HSP 1 Score: 193 bits (490), Expect = 1.260e-54 Identity = 122/264 (46.21%), Postives = 151/264 (57.20%), Query Frame = 1 Query: 238 HAGPEGTELPGIMHRTVGAEELKAE-VIVVGDIHGCYSEMVSLLER-CGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGF--LAVRGNHDN------FALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRN-VVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLP---GRRVVCVPA 987 H G LP ++H T+ E L+ + + VVGD+HGCY+E+ SLL C +D E VVLAGDLVNKGP SV+V+R AR G AVRGNHD F L A G SPK WV +++ D ++ ALPYTLS PS G +IVH GL+P PL Q M+ MRN +V G + P ++G+ WA W GPEHV FGHDA+R Q A ATGLDTGCVYG LTA++L GR V VP+ Sbjct: 18 HRTRSGIPLPPLLHATIPDEALRGKRLYVVGDVHGCYTELRSLLAAICA------DDDESVVVVLAGDLVNKGPRSVDVIRLARAYGTRCYAVRGNHDEAGLREWFRLRADAGY-LLSPKYA---------WVSEMTEADADYLLALPYTLSVPSRGTLIVHGGLIPRRPLADQSPADMTTMRNLIVRDHFGHAFAPTEHIERGVPWASLWPGPEHVLFGHDARRRLQTYAHATGLDTGCVYGGQLTALLLREDGGREYVQVPS 265
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A8J5XRL1_DIALT (Metallophos domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRL1_DIALT) HSP 1 Score: 192 bits (488), Expect = 2.210e-54 Identity = 114/272 (41.91%), Postives = 149/272 (54.78%), Query Frame = 1 Query: 253 GTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPP---WVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLA-----------WAKAWKGP-EHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNG 1023 G LP ++H K V++VGDIHGC E++ LL+ E D +VL GDLVNKGP S VV AR+ G L VRGNHD+ AL+A G+++ + PPP +V L++ D+ ++ LPYTL+ P G ++VHAG+VPG PL Q + + MRNV + PD L WA + G HV FGHDAKRG Q+E FATGLDTGC YG LTA++LP R++ PA + PGGG G Sbjct: 28 GVPLPRVVHAVHHLPPSKKRVLIVGDIHGCLHELLELLKAA------EFDAREDELVLVGDLVNKGPMSAQVVGWARERGVLCVRGNHDDAALSALRRSGKWASRA-------PPPSYEYVHDLTAADVAFLEQLPYTLALPDLGVLVVHAGVVPGRPLAEQHLQDLFKMRNVAPAT--------SAPDAPLVACERDVDGSKPWASTYGGELGHVVFGHDAKRGLQRETFATGLDTGCCYGGMLTALILPQHRLISSPALRTYEQPGGGKG 278
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A7S2XZH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH9_9STRA) HSP 1 Score: 193 bits (491), Expect = 4.570e-54 Identity = 111/242 (45.87%), Postives = 140/242 (57.85%), Query Frame = 1 Query: 313 VIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQE-GFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCV----PAEAMWSAPGGGNG 1023 VIV+GD+HG Y E+VSLL+ CG + + +V GDLVNKGP V VR AR V GNHD A+ A F + G K +VE L+ +D W+ LPYT+S P ++VHAGLVPGV L Q+ M MRN++ + +E P +G+AWA AW+GPEHVYFGHDAKRG Q+ FATGLDTGC G LTA +LPG +V V PAE ++P G Sbjct: 20 VIVIGDVHGSYDELVSLLDACGRK-------DSDIIVFVGDLVNKGPKPVECVRFARSSPNAYCVMGNHDLKAIKA------FRSWKNGGKLKKKYKYVEDLTQEDYDWLYNLPYTISLPDRNALVVHAGLVPGVSLEDQNLVEMVTMRNLLRSDDNS-WEALERPTEGVAWASAWEGPEHVYFGHDAKRGLQQWRFATGLDTGCCKGLHLTACILPGAEIVSVAAMTPAEDRATSPSSSTG 247 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig103.302.1 >prot_Ecto-sp13_S_contig103.302.1 ID=prot_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp MGLRVIEPRVGVTLTVMSLALLCMLRRVAAFRSGSIAALSRTMCKQRGQTback to top mRNA from alignment at Ecto-sp13_S_contig103:250..3448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig103.302.1 ID=mRNA_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3199bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:250..3448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig103:250..3448+ >mRNA_Ecto-sp13_S_contig103.302.1 ID=mRNA_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:250..3448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |