mRNA_Ecto-sp13_S_contig10277.286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 621 bits (1602), Expect = 1.020e-219 Identity = 304/316 (96.20%), Postives = 311/316 (98.42%), Query Frame = 1 Query: 1 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVCETSSTGEDH 948 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSP+AYGGAKMVHSAVTEMLANVLI++AVGTKAALRER GT SSDVTSTAEER+A T TFELCTDCPA+LIPLHVKPSPLLKCDTVS LPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVCET+STG+DH Sbjct: 318 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADTRTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVCETTSTGKDH 633
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.150e-92 Identity = 148/307 (48.21%), Postives = 196/307 (63.84%), Query Frame = 1 Query: 1 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 QD+RLY VS D+ VCN+EKL SGST+A+V SA+ FL T+FR+ WP+ I APS ++ N I VLMD+LP SW G L+ +D + G+ W GNPT A L V+ T D L +M+ Y+ +DPRV+FMSAFPMYQ +LFENE SR G R YG SIHYHY+S + P+A+ G MVHS +TEMLAN+++ +AV TKA L + + + +ER +F++C+DCP ++P+HVKP P C+ V +LPGNA G+ WD E CPDWCM + P Q +G VDVR C Sbjct: 243 QDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNV-NHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGRTPTDDVALRKMDGYQTQDPRVSFMSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGG---SEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVREC 545
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 258 bits (659), Expect = 7.620e-78 Identity = 131/308 (42.53%), Postives = 187/308 (60.71%), Query Frame = 1 Query: 1 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSD-EAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 QD+RL+ + D+ CN+EKL S ST+A V SA FL T+F++ WP+++ A S +I + E + VLMDA+P SW G L +D + G G W NPT+ L V + D+GL +M+ Y+ RDPRV+FMS FPMYQ +LFENE SR G R + S H+HY+S + ++P+ G MVHS +TEMLANV++ +AV TKA+L + ++ + E +F++C DCP +L+P HVKP P C+ + +LPG A +G W CPDWCM +EP Q + + +VDVR+C Sbjct: 305 QDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNGLGKMDGYQTRDPRVSFMSVFPMYQAKLFENEGSRNGIRRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKAAASKDEIQKLSSEVGK---SFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMC 609
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 239 bits (609), Expect = 4.360e-71 Identity = 133/309 (43.04%), Postives = 180/309 (58.25%), Query Frame = 1 Query: 37 DATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEE------RKAHT---STFE-----LCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 D+ VCN+EKL SGSTAA++ SAE FL TIFRE PWP+V+ APSN+I PS+ GT ++++ W NPT+ L V+ D+GL +M+ Y RDPRV+FMS FPMYQ +LFENE+S+ G R + S H+HYVS D + P+ G MVHS +TEMLANV+I +AV TKA L + + ++ E KA T F+ +C+DCP+SL+P HVK P C+ V +LPG+A G+AW + CPDWCM + P Q+ +G+V+VR C Sbjct: 258 DSLVCNNEKLMSGSTAAFIHSAEQFLASTIFREGGPWPTVVMAPSNLI-----------------PSNNEGTQFSVEEVL-----WKEENPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQAKAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWCMKQAPVSQSKTESGVVEVRRC 544
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 209 bits (533), Expect = 5.600e-60 Identity = 110/244 (45.08%), Postives = 149/244 (61.07%), Query Frame = 1 Query: 202 LQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIG---ERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTS-TAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 L VLM ALP SW G L +D + G+ W NPT+ L V+ + S D+GL +ME Y RDPRV+FMS FPMYQ +LFENEES G R + S H+HYVS D ++P+ G MVHS +TEMLANV+I +AV TKA L + + ++ +AE K+ F++C+DCP++L+P HVK P C+ V +LPG+A G+ W CPDWCM + P Q+ +G+V+VR C Sbjct: 295 LTYQVLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFPMYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKS----FQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRC 534
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 202 bits (514), Expect = 6.020e-58 Identity = 127/309 (41.10%), Postives = 165/309 (53.40%), Query Frame = 1 Query: 1 QDLRLYTVS-SVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATR-DSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 QDLRL+ V + DD+ VC+D+KLA + A +V++A FL+ ++F K WPSVI AP M DSDEA NL I+V+MDALPS+W GTL+M++ + G G+ +N NPT ATL+ V P S D+GL R++RY+Q+D R FMS FP ++ISKAVG+KAAL E+ ST R FE+CTDCPASLIP HVKP P+ C+ S L G+A VG+AW CP WC ++EP L DVRVC Sbjct: 211 QDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQWPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLSKFIGVDNGLGRIKRYQQQDARTKFMSTFP------------------------------------------------------IVISKAVGSKAALYEKA------TPSTNTHRGGGNEIFEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWC-SKEP---VDGVLNLKDVRVC 455
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 201 bits (510), Expect = 7.000e-57 Identity = 106/241 (43.98%), Postives = 144/241 (59.75%), Query Frame = 1 Query: 202 LQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTS-TAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 L VLMDALP SW G L +D + G+G W NPT+ L V+ S D+GL +M+ Y RDPR MYQ +LFENE+S+ G R + S H+HYVS D + P+ G MVHS +TEMLANV+I +AV TKA L + + ++ AE KA F++C+DCP++L+P HVK P C+ V +LPG+A G+AW CPDWCM + P Q++ +G+V+VR C Sbjct: 278 LTYQVLMDALPPSWEGKLSFVDHMAGFGIMWEEENPTMTALEDVRMWYLSSSPDDDNGLGKMDAYETRDPR--------MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKA----FQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQAPVSQSTTQSGVVEVRWC 506
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 195 bits (495), Expect = 1.960e-54 Identity = 104/215 (48.37%), Postives = 138/215 (64.19%), Query Frame = 1 Query: 292 WNTGNPTLATLSGVKPVNEFSPATR-----DSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTSTAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 W GNPT+A L V A+R S L +M+ Y+ RD RV+FMSAFPMYQ + FENE S+ G R YG +IHYHY+S ++P+A+ G+ MVHS +TEMLANV+I +AV TKAAL + S+DV +ER +F++C+DCP L+P HVKP P C+T +L G+A VG+ W+ E CPDWCM + P Q + +G VDVR C Sbjct: 321 WYEGNPTMAALEDVSIAFTGGRASRRPPFDGSALSKMDGYQARDSRVSFMSAFPMYQAKFFENEGSKQGTRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAA-STDVNK--QERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVREC 532
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.320e-50 Identity = 104/225 (46.22%), Postives = 135/225 (60.00%), Query Frame = 1 Query: 1 QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNL-----------QISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMY--QGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAV-GTKA 633 QD+RLY VS D+ VCN+EKL SGSTAA+V SA+ FL T FR+ WP+ I APS ++ + + VLMD+LP SW G L+ +D + G+ W GNPT L V+ T D L +M+ Y+ +DPRV+F+SAFP+ + LFENE SR G R YG SIHYHYVS + P+A+ G MVHS +TEMLANV + + GTKA Sbjct: 228 QDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQWPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRITATGRTPTDDFALRKMDGYQTQDPRVSFISAFPVSFAERNLFENERSRQGIRHYGASIHYHYVSSTTSDPEAHNGTTMVHSTMTEMLANVSRRRVLTGTKA 452
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.280e-50 Identity = 93/211 (44.08%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 292 WNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPDAYGGAKMVHSAVTEMLANVLISKAVGTKAALRERTGTQSSDVTS-TAEERKAHTSTFELCTDCPASLIPLHVKPSPLLKCDTVSTLPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 921 W NPT+ L GV D+GL +M+ Y+ RD RV+FMS FPMYQ +LFEN++SR G R + S H+H+VS D ++P+ G MVHS +TEMLANV++ +AV TKA L + + ++ +AE K+ F++C+DCP SL+P HVK P CD V +LPG A G+ W + CPDWCM + P Q + +V VR C Sbjct: 208 WTEENPTMTALKGVGIRFGGRWPNDDNGLGKMDGYQTRDSRVSFMSVFPMYQAKLFENQKSRNGLRRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKS----FQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVREC 414 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10277.286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10277.286.1 >prot_Ecto-sp13_S_contig10277.286.1 ID=prot_Ecto-sp13_S_contig10277.286.1|Name=mRNA_Ecto-sp13_S_contig10277.286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp QDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPback to top mRNA from alignment at Ecto-sp13_S_contig10277:2365..5852- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10277.286.1 ID=mRNA_Ecto-sp13_S_contig10277.286.1|Name=mRNA_Ecto-sp13_S_contig10277.286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10277:2365..5852- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10277:2365..5852- >mRNA_Ecto-sp13_S_contig10277.286.1 ID=mRNA_Ecto-sp13_S_contig10277.286.1|Name=mRNA_Ecto-sp13_S_contig10277.286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=954bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10277:2365..5852- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |