mRNA_Ecto-sp13_S_contig10269.283.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: D8LBU4_ECTSI (Carboxypeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU4_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 2.600e-142 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFYT 723
LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTV+EDGETT PNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGS INLQGMGIGNGLTSPAIQYPFYT
Sbjct: 25 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVNEDGETTMPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSAINLQGMGIGNGLTSPAIQYPFYT 223
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A6S9GAZ6_HETAK (Carboxypeptidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GAZ6_HETAK) HSP 1 Score: 259 bits (662), Expect = 3.870e-81 Identity = 121/189 (64.02%), Postives = 154/189 (81.48%), Query Frame = 1 Query: 154 LCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
LC + V QLSGY+KI +G+ +K YFFW ES+DSPS DPLI+WLTGGPGCSS LALLAENGPCTV+EDG +TT NP SWNS AN++WVDQPAGVGFSYG A D+D E VGEDM+ F++EF A +P+YA+ FYVFGESYGGHY P+V+ R+++G + G+G+ +NL+G+GIGNGLT+P +Q+ +Y
Sbjct: 49 LCDPD-VDQLSGYFKI--DGSVNKNYFFWFFESRDSPSTDPLIIWLTGGPGCSSILALLAENGPCTVNEDGASTTVNPFSWNSHANIMWVDQPAGVGFSYGAAS-DYDRNEAEVGEDMYHFVKEFLAQYPQYAAQDFYVFGESYGGHYVPAVSSRIYRGNQEGDGAPVNLKGIGIGNGLTNPLVQFEYY 233
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A067D239_SAPPC (Carboxypeptidase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D239_SAPPC) HSP 1 Score: 253 bits (646), Expect = 1.660e-78 Identity = 120/198 (60.61%), Postives = 150/198 (75.76%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
L+ APVA + C + KQLSGY+KI +G+ K YF+W ES+D+P +DP+I+WLTGGPGCSS LALL ENGPC+V++D NP SWN++AN++W+DQPAGVGFSYG ++D E VG DM+ FLQ FFA HPEYASN FYVFGESY GHY P+VAHR++ G K G INL+G+GIGNGLTSP +QY +Y
Sbjct: 36 LQDAPVADSFC--DSTKQLSGYFKI--DGSKSKNYFYWFFESRDAPKDDPVIIWLTGGPGCSSMLALLGENGPCSVNDDLSLKR-NPYSWNAKANIMWIDQPAGVGFSYGDKS-EYDTDETMVGNDMYHFLQAFFAAHPEYASNAFYVFGESYAGHYVPAVAHRIYSGNKEGSSPKINLKGIGIGNGLTSPEVQYQYY 227
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: K3XCD6_GLOUD (Carboxypeptidase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCD6_GLOUD) HSP 1 Score: 253 bits (646), Expect = 1.790e-78 Identity = 125/198 (63.13%), Postives = 147/198 (74.24%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
L APVAA C E KQLSGY+K+ G+ K YF+W ES+ +PS DPLI+WLTGGPGCSSTLALL ENGPC+V++D T NP SWN RAN++WVDQP GVGFSYG ++D E VG+DMF FLQEFFA HPEY FYVFGESY GHY P++AHRV+ G +N EG INLQG GIGNGLT+P +QY +Y
Sbjct: 40 LSEAPVAAGFCDE--TKQLSGYFKLG--GSKSKNYFYWFFESRGTPSIDPLIIWLTGGPGCSSTLALLEENGPCSVNDD-LTLKRNPFSWNERANIMWVDQPIGVGFSYGDKS-EYDTSEKEVGDDMFQFLQEFFAAHPEYQKQEFYVFGESYAGHYVPAIAHRVFTGNQNKEGLHINLQGFGIGNGLTNPQVQYKYY 231
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A7S3M081_9STRA (Carboxypeptidase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M081_9STRA) HSP 1 Score: 248 bits (632), Expect = 3.600e-77 Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 1 Query: 181 LSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
+SGYY + DE + DK YFFW ES+ PS DPL++WLTGGPGCSS LALL ENGPC V EDG +T NP SWNS +N++W+DQPAGVG+SYG D E AVGEDM+ FLQEFF HPEY SN F+VFGESYGGHYAP++A R++QG N EG INL G+G+GNGLT P IQY +Y
Sbjct: 1 MSGYYSV-DEASLDKNYFFWFFESRSKPSTDPLVIWLTGGPGCSSQLALLTENGPCKVSEDGLSTYNNPYSWNSNSNIMWIDQPAGVGYSYGTKN---DKDEAAVGEDMYQFLQEFFTAHPEYVSNHFFVFGESYGGHYAPAIASRIFQGNNNKEGIHINLSGVGVGNGLTDPVIQYQYY 176
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A0A7CM09_9STRA (Carboxypeptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CM09_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.430e-75 Identity = 117/198 (59.09%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
L+S PV C + KQLSGY+KI +G+ K YFFW ES+ +P +DP+I+WLTGGPGCSS LALL ENGPC+V++D + NP SWN +ANV+W+DQPAGVGFSYG A ++D E VG DM+ FLQEFF HPEYA N FYVFGESY GHY P+VAHR++ G G ++IN++G+GIGNGLT+P +QY +Y
Sbjct: 36 LQSHPVEEGFC--DTTKQLSGYFKI--DGSKSKNYFFWFFESRGNPKDDPVIIWLTGGPGCSSMLALLGENGPCSVNDDLSLKS-NPYSWNEKANVMWIDQPAGVGFSYGDAS-EYDTDETMVGNDMYHFLQEFFQAHPEYAKNAFYVFGESYAGHYVPAVAHRIYTGNMEGGKALINMKGIGIGNGLTAPEVQYKYY 227
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A024UWB3_9STRA (Carboxypeptidase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWB3_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.330e-74 Identity = 116/198 (58.59%), Postives = 145/198 (73.23%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
L+ APV C + KQLSGY+KI +G+ K YF+W ES+++PS DP ++WLTGGPGCSS LALL ENGPCTV++D T NP SWN ++N++W+DQPAGVGFSYG ++D E VG DM+ FLQEFF HPEYA N FYVFGESY GHY P+VAHR++ G K INL+G+GIGNGLT+P +QY +Y
Sbjct: 49 LDDAPVEEGFC--DTTKQLSGYFKI--DGSKSKNYFYWFFESRNAPSTDPFVIWLTGGPGCSSILALLGENGPCTVNDD-LTIKRNPFSWNEKSNIMWIDQPAGVGFSYGDTS-EYDTDETMVGNDMYHFLQEFFQVHPEYAKNDFYVFGESYAGHYVPAVAHRIYVGNKESTNPKINLKGIGIGNGLTTPEVQYKWY 240
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A0A7CNV6_9STRA (Carboxypeptidase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CNV6_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.390e-74 Identity = 116/198 (58.59%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 127 LESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
L+ APV A LC + KQLSGY+KI +G+ K YF+W ES+++P + P+I+WLTGGPGCSS LALL ENGPC+V++D NP SWN++AN++W+DQPAGVGFSYG ++D E VG DM+ FLQ FFA HPEYA N FYVFGESY GHY P+VAHR+++G K+ IN++G+GIGNGLT+P QYP Y
Sbjct: 36 LQDAPVEADLC--DSTKQLSGYFKI--DGSKSKNYFYWFFESREAPKDAPVIIWLTGGPGCSSMLALLGENGPCSVNDDLSLKR-NPYSWNAKANIMWIDQPAGVGFSYGDKS-EYDTDETMVGNDMYHFLQAFFAAHPEYAKNAFYVFGESYAGHYVPAVAHRIYEGNKDETAPKINMKGIGIGNGLTAPEKQYPLY 227
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A8K1FCT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCT1_PYTOL) HSP 1 Score: 241 bits (616), Expect = 4.610e-74 Identity = 117/201 (58.21%), Postives = 142/201 (70.65%), Query Frame = 1 Query: 118 TCVLESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
T L + V C + KQ SGY+KI +G+ K YF+W ES+ +PS DP+I+WLTGGPGCSS LAL ENGPCT+++D T NP SWN RAN++W+DQP GVGFSYG ++D E VG+DMF FLQ FF HPEY FYVFGESYGGHY P+VAHRV++G N EG INLQG GIGNGLT+P +QY +Y
Sbjct: 32 TYTLTTHSVDEGFC--DATKQYSGYFKI--DGSKSKNYFYWFFESRGNPSTDPVIIWLTGGPGCSSILALFVENGPCTINDD-MTLKSNPFSWNERANIMWIDQPVGVGFSYGDKS-EYDSSEKEVGDDMFHFLQSFFKAHPEYQKQDFYVFGESYGGHYVPAVAHRVFEGNNNKEGLHINLQGFGIGNGLTNPQVQYKYY 226
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Match: A0A2D4BUW4_PYTIN (Carboxypeptidase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUW4_PYTIN) HSP 1 Score: 241 bits (615), Expect = 6.500e-74 Identity = 118/207 (57.00%), Postives = 145/207 (70.05%), Query Frame = 1 Query: 100 SKSTRQTCVLESAPVAAALCGEEGVKQLSGYYKIQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVDEDGETTTPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEGSVINLQGMGIGNGLTSPAIQYPFY 720
S + +T L S V A C + KQ SGY+KI +G+ K YF+W ES+ P++DP+I+WLTGGPGCSS LAL ENGPC++ +D T NP SWN RAN++W+DQP GVGFSYG ++D E VG+DMF FLQ FF HPEY + PFYVFGESYGGHY P+VAHR++ G N EG INLQG GIGNGLT P +QY +Y
Sbjct: 23 SDNNNRTYSLTSNAVDAEFC--DATKQYSGYFKI--DGSKSKNYFYWFFESRGXPTKDPVIIWLTGGPGCSSILALFVENGPCSIKDD-LTLERNPYSWNERANIMWIDQPIGVGFSYGDKS-EYDSTEKEVGDDMFHFLQSFFKAHPEYQAQPFYVFGESYGGHYVPAVAHRIFTGNNNKEGLHINLQGFGIGNGLTDPQVQYKYY 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10269.283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10269.283.1 >prot_Ecto-sp13_S_contig10269.283.1 ID=prot_Ecto-sp13_S_contig10269.283.1|Name=mRNA_Ecto-sp13_S_contig10269.283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp TYTEEFFSQVFSLSSGTFTHHAGRHFCTCRGRSSKSTRQTCVLESAPVAAback to top mRNA from alignment at Ecto-sp13_S_contig10269:2514..5924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10269.283.1 ID=mRNA_Ecto-sp13_S_contig10269.283.1|Name=mRNA_Ecto-sp13_S_contig10269.283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3411bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10269:2514..5924+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10269:2514..5924+ >mRNA_Ecto-sp13_S_contig10269.283.1 ID=mRNA_Ecto-sp13_S_contig10269.283.1|Name=mRNA_Ecto-sp13_S_contig10269.283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10269:2514..5924+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |